RNA–Protein interactions for RNA: ENST00000257264.3

TCN1-201, Transcript of transcobalamin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TCN1, Length 1,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN1-201ENST00000257264 CDKN1AP38936 164 aa4.84□□□□□ -1.63
TCN1-201ENST00000257264 CDX1P47902 265 aaPredicted RBP4.84□□□□□ -1.63
TCN1-201ENST00000257264 MAPK12P53778 367 aa4.84□□□□□ -1.63
TCN1-201ENST00000257264 MTTPP55157 894 aa4.84□□□□□ -1.63
TCN1-201ENST00000257264 C21orf58P58505 322 aa4.84□□□□□ -1.63
TCN1-201ENST00000257264 FOXM1Q08050 763 aa4.84□□□□□ -1.63
TCN1-201ENST00000257264 GPM6BQ13491 265 aa4.84□□□□□ -1.63
TCN1-201ENST00000257264 CUL3Q13618 768 aa4.84□□□□□ -1.63
TCN1-201ENST00000257264 PDIA5Q14554 519 aa4.84□□□□□ -1.63
TCN1-201ENST00000257264 ZKSCAN8Q15776 578 aaPredicted RBP4.84□□□□□ -1.63
TCN1-201ENST00000257264 ATAD3BQ5T9A4 648 aa4.84□□□□□ -1.63
TCN1-201ENST00000257264 FRG2Q64ET8 278 aa4.84□□□□□ -1.63
TCN1-201ENST00000257264 EMBQ6PCB8 327 aa4.84□□□□□ -1.63
TCN1-201ENST00000257264 ARSKQ6UWY0 536 aa4.84□□□□□ -1.63
TCN1-201ENST00000257264 CCBE1Q6UXH8 406 aaPredicted RBP4.84□□□□□ -1.63
TCN1-201ENST00000257264 CCNI2Q6ZMN8 369 aaPredicted RBP4.84□□□□□ -1.63
TCN1-201ENST00000257264 ANKRD46Q86W74 232 aa4.84□□□□□ -1.63
TCN1-201ENST00000257264 NBPF5PQ86XG9 351 aaPredicted RBP4.84□□□□□ -1.63
TCN1-201ENST00000257264 ZNF573Q86YE8 665 aa4.84□□□□□ -1.63
TCN1-201ENST00000257264 BEST3Q8N1M1 668 aa4.84□□□□□ -1.63
TCN1-201ENST00000257264 SLC44A3Q8N4M1 653 aa4.84□□□□□ -1.63
TCN1-201ENST00000257264 MMGT1Q8N4V1 131 aa4.84□□□□□ -1.63
TCN1-201ENST00000257264 RNF10Q8N5U6 811 aaKnown RBP4.84□□□□□ -1.63
TCN1-201ENST00000257264 GCSAMQ8N6F7 178 aa4.84□□□□□ -1.63
TCN1-201ENST00000257264 NOA1Q8NC60 698 aaKnown RBP4.84□□□□□ -1.63
TCN1-201ENST00000257264 ACTRT2Q8TDY3 377 aa4.84□□□□□ -1.63
TCN1-201ENST00000257264 RNF139Q8WU17 664 aa4.84□□□□□ -1.63
TCN1-201ENST00000257264 SYN2Q92777 582 aaPredicted RBP4.84□□□□□ -1.63
TCN1-201ENST00000257264 ORAI1Q96D31 301 aa4.84□□□□□ -1.63
TCN1-201ENST00000257264 ZNF503Q96F45 646 aa4.84□□□□□ -1.63
TCN1-201ENST00000257264 LINGO1Q96FE5 620 aa4.84□□□□□ -1.63
TCN1-201ENST00000257264 ASCL2Q99929 193 aa4.84□□□□□ -1.63
TCN1-201ENST00000257264 ZNF559Q9BR84 538 aa4.84□□□□□ -1.63
TCN1-201ENST00000257264 TRIM9Q9C026 710 aa4.84□□□□□ -1.63
TCN1-201ENST00000257264 ZMYND12Q9H0C1 365 aa4.84□□□□□ -1.63
TCN1-201ENST00000257264 CATSPERBQ9H7T0 1116 aa4.84□□□□□ -1.63
TCN1-201ENST00000257264 HHATLQ9HCP6 504 aa4.84□□□□□ -1.63
TCN1-201ENST00000257264 TM9SF3Q9HD45 589 aa4.84□□□□□ -1.63
TCN1-201ENST00000257264 ZCCHC3Q9NUD5 404 aaKnown RBP4.84□□□□□ -1.63
TCN1-201ENST00000257264 RHCGQ9UBD6 479 aa4.84□□□□□ -1.63
TCN1-201ENST00000257264 FAM153AQ9UHL3 310 aa4.84□□□□□ -1.63
TCN1-201ENST00000257264 SNX12Q9UMY4 172 aa4.84□□□□□ -1.63
TCN1-201ENST00000257264 HYOU1Q9Y4L1 999 aa4.84□□□□□ -1.63
TCN1-201ENST00000257264 COL5A3P25940 1745 aaPredicted RBP4.84□□□□□ -1.63
TCN1-201ENST00000257264 A0A0U1RQJ8 604 aa4.83□□□□□ -1.64
TCN1-201ENST00000257264 ESYT2A0FGR8 921 aa4.83□□□□□ -1.64
TCN1-201ENST00000257264 MACROD2A1Z1Q3 448 aa4.83□□□□□ -1.64
TCN1-201ENST00000257264 PLK4O00444 970 aa4.83□□□□□ -1.64
TCN1-201ENST00000257264 NUAK1O60285 661 aa4.83□□□□□ -1.64
TCN1-201ENST00000257264 CYTIPO60759 359 aa4.83□□□□□ -1.64
TCN1-201ENST00000257264 PRAF2O60831 178 aa4.83□□□□□ -1.64
TCN1-201ENST00000257264 JTBO76095 146 aa4.83□□□□□ -1.64
TCN1-201ENST00000257264 LCA5LO95447 670 aa4.83□□□□□ -1.64
TCN1-201ENST00000257264 IGHV2-70P01814 119 aa4.83□□□□□ -1.64
TCN1-201ENST00000257264 PCCBP05166 539 aa4.83□□□□□ -1.64
TCN1-201ENST00000257264 FUT1P19526 365 aa4.83□□□□□ -1.64
TCN1-201ENST00000257264 GLRA2P23416 452 aa4.83□□□□□ -1.64
TCN1-201ENST00000257264 CCNCP24863 283 aa4.83□□□□□ -1.64
TCN1-201ENST00000257264 PIK3R1P27986 724 aa4.83□□□□□ -1.64
TCN1-201ENST00000257264 APOBEC1P41238 236 aaKnown RBP4.83□□□□□ -1.64
TCN1-201ENST00000257264 EPS15P42566 896 aa4.83□□□□□ -1.64
TCN1-201ENST00000257264 MAGEA9P43362 315 aa4.83□□□□□ -1.64
TCN1-201ENST00000257264 SLC6A12P48065 614 aa4.83□□□□□ -1.64
TCN1-201ENST00000257264 TRPC1P48995 793 aa4.83□□□□□ -1.64
TCN1-201ENST00000257264 COMPP49747 757 aaPredicted RBP4.83□□□□□ -1.64
TCN1-201ENST00000257264 CNN1P51911 297 aaKnown RBP4.83□□□□□ -1.64
TCN1-201ENST00000257264 CDH12P55289 794 aa4.83□□□□□ -1.64
TCN1-201ENST00000257264 CALCRLQ16602 461 aa4.83□□□□□ -1.64
TCN1-201ENST00000257264 DECR1Q16698 335 aa4.83□□□□□ -1.64
TCN1-201ENST00000257264 CTU2Q2VPK5 515 aaKnown RBP4.83□□□□□ -1.64
TCN1-201ENST00000257264 SLC9C1Q4G0N8 1177 aa4.83□□□□□ -1.64
TCN1-201ENST00000257264 CFAP221Q4G0U5 840 aa4.83□□□□□ -1.64
TCN1-201ENST00000257264 DUS1LQ6P1R4 473 aaKnown RBP4.83□□□□□ -1.64
TCN1-201ENST00000257264 WDR59Q6PJI9 974 aa4.83□□□□□ -1.64
TCN1-201ENST00000257264 DLEU7Q6UYE1 221 aa4.83□□□□□ -1.64
TCN1-201ENST00000257264 B3GLCTQ6Y288 498 aa4.83□□□□□ -1.64
TCN1-201ENST00000257264 TMPRSS11FQ6ZWK6 438 aa4.83□□□□□ -1.64
TCN1-201ENST00000257264 TMEM126BQ8IUX1 230 aa4.83□□□□□ -1.64
TCN1-201ENST00000257264 IFT20Q8IY31 132 aa4.83□□□□□ -1.64
TCN1-201ENST00000257264 EFCAB13Q8IY85 973 aa4.83□□□□□ -1.64
TCN1-201ENST00000257264 C10orf67Q8IYJ2 551 aa4.83□□□□□ -1.64
TCN1-201ENST00000257264 DSELQ8IZU8 1212 aa4.83□□□□□ -1.64
TCN1-201ENST00000257264 ELP5Q8TE02 316 aa4.83□□□□□ -1.64
TCN1-201ENST00000257264 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.83□□□□□ -1.64
TCN1-201ENST00000257264 SLC9A6Q92581 669 aa4.83□□□□□ -1.64
TCN1-201ENST00000257264 LARP4BQ92615 738 aaKnown RBP4.83□□□□□ -1.64
TCN1-201ENST00000257264 ZNF582Q96NG8 517 aaPredicted RBP4.83□□□□□ -1.64
TCN1-201ENST00000257264 MSTO1Q9BUK6 570 aa4.83□□□□□ -1.64
TCN1-201ENST00000257264 B3GNT4Q9C0J1 378 aa4.83□□□□□ -1.64
TCN1-201ENST00000257264 GLT8D2Q9H1C3 349 aa4.83□□□□□ -1.64
TCN1-201ENST00000257264 DNAJC4Q9NNZ3 241 aa4.83□□□□□ -1.64
TCN1-201ENST00000257264 SPAG4Q9NPE6 437 aa4.83□□□□□ -1.64
TCN1-201ENST00000257264 AGPAT5Q9NUQ2 364 aa4.83□□□□□ -1.64
TCN1-201ENST00000257264 NMRK1Q9NWW6 199 aa4.83□□□□□ -1.64
TCN1-201ENST00000257264 RCC2Q9P258 522 aaKnown RBP4.83□□□□□ -1.64
TCN1-201ENST00000257264 TXNDC16Q9P2K2 825 aa4.83□□□□□ -1.64
TCN1-201ENST00000257264 LRWD1Q9UFC0 647 aa4.83□□□□□ -1.64
TCN1-201ENST00000257264 RSPH14Q9UHP6 348 aa4.83□□□□□ -1.64
TCN1-201ENST00000257264 FOXA2Q9Y261 457 aaPredicted RBP4.83□□□□□ -1.64
TCN1-201ENST00000257264 ROBO1Q9Y6N7 1651 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms