RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 ENO4A6NNW6 628 aa18.13■□□□□ 0.49
TRIM47-201ENST00000254816 TOR1BO14657 336 aa18.13■□□□□ 0.49
TRIM47-201ENST00000254816 ILF3Q12906 894 aaKnown RBP eCLIP18.13■□□□□ 0.49
TRIM47-201ENST00000254816 C1orf61Q13536 156 aa18.13■□□□□ 0.49
TRIM47-201ENST00000254816 SAMD4BQ5PRF9 694 aaKnown RBP18.13■□□□□ 0.49
TRIM47-201ENST00000254816 ARMCX6Q7L4S7 300 aa18.13■□□□□ 0.49
TRIM47-201ENST00000254816 APLFQ8IW19 511 aaPredicted RBP18.13■□□□□ 0.49
TRIM47-201ENST00000254816 DPP10Q8N608 796 aa18.13■□□□□ 0.49
TRIM47-201ENST00000254816 ABHD11Q8NFV4 315 aa18.13■□□□□ 0.49
TRIM47-201ENST00000254816 WDR48Q8TAF3 677 aa18.13■□□□□ 0.49
TRIM47-201ENST00000254816 TMEM125Q96AQ2 219 aa18.13■□□□□ 0.49
TRIM47-201ENST00000254816 BTBD9Q96Q07 612 aa18.13■□□□□ 0.49
TRIM47-201ENST00000254816 OR52E6Q96RD3 313 aa18.13■□□□□ 0.49
TRIM47-201ENST00000254816 AIF1LQ9BQI0 150 aa18.13■□□□□ 0.49
TRIM47-201ENST00000254816 RAB11FIP5Q9BXF6 653 aa18.13■□□□□ 0.49
TRIM47-201ENST00000254816 GPR27Q9NS67 375 aa18.13■□□□□ 0.49
TRIM47-201ENST00000254816 PCDHB11Q9Y5F2 797 aa18.13■□□□□ 0.49
TRIM47-201ENST00000254816 MYO1DO94832 1006 aa18.12■□□□□ 0.49
TRIM47-201ENST00000254816 IL6P05231 212 aa18.12■□□□□ 0.49
TRIM47-201ENST00000254816 ANXA4P09525 319 aaPredicted RBP18.12■□□□□ 0.49
TRIM47-201ENST00000254816 PRDX1Q06830 199 aaKnown RBP18.12■□□□□ 0.49
TRIM47-201ENST00000254816 MAPKAPK3Q16644 382 aa18.12■□□□□ 0.49
TRIM47-201ENST00000254816 NANOGP8Q6NSW7 305 aa18.12■□□□□ 0.49
TRIM47-201ENST00000254816 PRMT9Q6P2P2 845 aa18.12■□□□□ 0.49
TRIM47-201ENST00000254816 DNAJC14Q6Y2X3 702 aaPredicted RBP18.12■□□□□ 0.49
TRIM47-201ENST00000254816 ANKRD46Q86W74 232 aa18.12■□□□□ 0.49
TRIM47-201ENST00000254816 RIMKLAQ8IXN7 391 aa18.12■□□□□ 0.49
TRIM47-201ENST00000254816 TMEM102Q8N9M5 508 aaPredicted RBP18.12■□□□□ 0.49
TRIM47-201ENST00000254816 LCN9Q8WX39 176 aa18.12■□□□□ 0.49
TRIM47-201ENST00000254816 GTF2H4Q92759 462 aa18.12■□□□□ 0.49
TRIM47-201ENST00000254816 UBE2E3Q969T4 207 aa18.12■□□□□ 0.49
TRIM47-201ENST00000254816 CLDN23Q96B33 292 aa18.12■□□□□ 0.49
TRIM47-201ENST00000254816 NANOGQ9H9S0 305 aa18.12■□□□□ 0.49
TRIM47-201ENST00000254816 METTL12A8MUP2 240 aa18.12■□□□□ 0.49
TRIM47-201ENST00000254816 PRICKLE3O43900 615 aaPredicted RBP18.12■□□□□ 0.49
TRIM47-201ENST00000254816 LCMT2O60294 686 aaKnown RBP18.12■□□□□ 0.49
TRIM47-201ENST00000254816 TBX6O95947 436 aaPredicted RBP18.12■□□□□ 0.49
TRIM47-201ENST00000254816 WNT1P04628 370 aa18.12■□□□□ 0.49
TRIM47-201ENST00000254816 ACPPP15309 386 aa18.12■□□□□ 0.49
TRIM47-201ENST00000254816 SOX11P35716 441 aa18.12■□□□□ 0.49
TRIM47-201ENST00000254816 CSNK1G2P78368 415 aa18.12■□□□□ 0.49
TRIM47-201ENST00000254816 RPL6Q02878 288 aaKnown RBP18.12■□□□□ 0.49
TRIM47-201ENST00000254816 SELPLGQ14242 412 aa18.12■□□□□ 0.49
TRIM47-201ENST00000254816 HKDC1Q2TB90 917 aa18.12■□□□□ 0.49
TRIM47-201ENST00000254816 SPIN4Q56A73 249 aa18.12■□□□□ 0.49
TRIM47-201ENST00000254816 ANKRD26P1Q6NSI1 321 aa18.12■□□□□ 0.49
TRIM47-201ENST00000254816 UGT2A3Q6UWM9 527 aa18.12■□□□□ 0.49
TRIM47-201ENST00000254816 AMIGO1Q86WK6 493 aa18.12■□□□□ 0.49
TRIM47-201ENST00000254816 TICAM1Q8IUC6 712 aa18.12■□□□□ 0.49
TRIM47-201ENST00000254816 FBXL6Q8N531 539 aa18.12■□□□□ 0.49
TRIM47-201ENST00000254816 OR7A2PQ8NGA2 310 aa18.12■□□□□ 0.49
TRIM47-201ENST00000254816 GPBAR1Q8TDU6 330 aa18.12■□□□□ 0.49
TRIM47-201ENST00000254816 SORBS1Q9BX66 1292 aaKnown RBP18.12■□□□□ 0.49
TRIM47-201ENST00000254816 TAAR2Q9P1P5 351 aa18.12■□□□□ 0.49
TRIM47-201ENST00000254816 KLHL20Q9Y2M5 609 aa18.12■□□□□ 0.49
TRIM47-201ENST00000254816 C15orf38-AP3S2A0A0A6YYH1 394 aa18.11■□□□□ 0.49
TRIM47-201ENST00000254816 GNG14A0A1W2PPG7 69 aa18.11■□□□□ 0.49
TRIM47-201ENST00000254816 ANKDD1BA6NHY2 528 aa18.11■□□□□ 0.49
TRIM47-201ENST00000254816 PCDH7O60245 1069 aa18.11■□□□□ 0.49
TRIM47-201ENST00000254816 C8BP07358 591 aa18.11■□□□□ 0.49
TRIM47-201ENST00000254816 TIA1P31483 386 aaKnown RBP eCLIP18.11■□□□□ 0.49
TRIM47-201ENST00000254816 PIK3CBP42338 1070 aa18.11■□□□□ 0.49
TRIM47-201ENST00000254816 REEP5Q00765 189 aa18.11■□□□□ 0.49
TRIM47-201ENST00000254816 FOXM1Q08050 763 aa18.11■□□□□ 0.49
TRIM47-201ENST00000254816 PWP1Q13610 501 aa18.11■□□□□ 0.49
TRIM47-201ENST00000254816 GK3PQ14409 553 aa18.11■□□□□ 0.49
TRIM47-201ENST00000254816 PRRT3Q5FWE3 981 aa18.11■□□□□ 0.49
TRIM47-201ENST00000254816 COMMD6Q7Z4G1 85 aa18.11■□□□□ 0.49
TRIM47-201ENST00000254816 ARPINQ7Z6K5 226 aa18.11■□□□□ 0.49
TRIM47-201ENST00000254816 OR4K1Q8NGD4 311 aa18.11■□□□□ 0.49
TRIM47-201ENST00000254816 LRTOMTQ8WZ04 291 aa18.11■□□□□ 0.49
TRIM47-201ENST00000254816 TSC22D3Q99576 134 aa18.11■□□□□ 0.49
TRIM47-201ENST00000254816 MIR1-1HGQ9H1L0 117 aa18.11■□□□□ 0.49
TRIM47-201ENST00000254816 PIF1Q9H611 641 aa18.11■□□□□ 0.49
TRIM47-201ENST00000254816 SLC6A20Q9NP91 592 aa18.11■□□□□ 0.49
TRIM47-201ENST00000254816 MRPS30Q9NP92 439 aaKnown RBP18.11■□□□□ 0.49
TRIM47-201ENST00000254816 SIT1Q9Y3P8 196 aa18.11■□□□□ 0.49
TRIM47-201ENST00000254816 NEUROG3Q9Y4Z2 214 aa18.11■□□□□ 0.49
TRIM47-201ENST00000254816 AP4S1Q9Y587 144 aa18.11■□□□□ 0.49
TRIM47-201ENST00000254816 TP53BP1Q12888 1972 aaPredicted RBP18.11■□□□□ 0.49
TRIM47-201ENST00000254816 ISM1B1AKI9 464 aa18.11■□□□□ 0.49
TRIM47-201ENST00000254816 OR1F1O43749 312 aa18.11■□□□□ 0.49
TRIM47-201ENST00000254816 DFNA5O60443 496 aa18.11■□□□□ 0.49
TRIM47-201ENST00000254816 HOXB3P14651 431 aaPredicted RBP18.11■□□□□ 0.49
TRIM47-201ENST00000254816 S100A3P33764 101 aa18.11■□□□□ 0.49
TRIM47-201ENST00000254816 CHN2P52757 468 aa18.11■□□□□ 0.49
TRIM47-201ENST00000254816 UGT8Q16880 541 aa18.11■□□□□ 0.49
TRIM47-201ENST00000254816 C6orf52Q5T4I8 152 aa18.11■□□□□ 0.49
TRIM47-201ENST00000254816 OR4F3Q6IEY1 312 aa18.11■□□□□ 0.49
TRIM47-201ENST00000254816 LPCAT2Q7L5N7 544 aa18.11■□□□□ 0.49
TRIM47-201ENST00000254816 IFNEQ86WN2 208 aa18.11■□□□□ 0.49
TRIM47-201ENST00000254816 UBALD2Q8IYN6 164 aa18.11■□□□□ 0.49
TRIM47-201ENST00000254816 ST13P4Q8IZP2 240 aaPredicted RBP18.11■□□□□ 0.49
TRIM47-201ENST00000254816 ADCY4Q8NFM4 1077 aa18.11■□□□□ 0.49
TRIM47-201ENST00000254816 FAM110BQ8TC76 370 aa18.11■□□□□ 0.49
TRIM47-201ENST00000254816 SLCO4A1Q96BD0 722 aa18.11■□□□□ 0.49
TRIM47-201ENST00000254816 UBAP1Q9NZ09 502 aa18.11■□□□□ 0.49
TRIM47-201ENST00000254816 VAPAQ9P0L0 249 aa18.11■□□□□ 0.49
TRIM47-201ENST00000254816 USP22Q9UPT9 525 aa18.11■□□□□ 0.49
TRIM47-201ENST00000254816 AP4B1Q9Y6B7 739 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms