RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 HTR3DQ70Z44 454 aa18.29■□□□□ 0.52
SNX4-201ENST00000251775 TRIM46Q7Z4K8 759 aa18.29■□□□□ 0.52
SNX4-201ENST00000251775 VTCN1Q7Z7D3 282 aa18.29■□□□□ 0.52
SNX4-201ENST00000251775 GATAD2AQ86YP4 633 aa18.29■□□□□ 0.52
SNX4-201ENST00000251775 CHCHD4Q8N4Q1 142 aa18.29■□□□□ 0.52
SNX4-201ENST00000251775 OR2AP1Q8NGE2 309 aa18.29■□□□□ 0.52
SNX4-201ENST00000251775 DNAJB8Q8NHS0 232 aa18.29■□□□□ 0.52
SNX4-201ENST00000251775 UBTD2Q8WUN7 234 aa18.29■□□□□ 0.52
SNX4-201ENST00000251775 Q96MT0 163 aa18.29■□□□□ 0.52
SNX4-201ENST00000251775 CENPOQ9BU64 300 aa18.29■□□□□ 0.52
SNX4-201ENST00000251775 NTMT1Q9BV86 223 aa18.29■□□□□ 0.52
SNX4-201ENST00000251775 ASIC5Q9NY37 505 aa18.29■□□□□ 0.52
SNX4-201ENST00000251775 ZNF490Q9ULM2 529 aaPredicted RBP18.29■□□□□ 0.52
SNX4-201ENST00000251775 AGAP14A8MT82 685 aa18.28■□□□□ 0.52
SNX4-201ENST00000251775 AP3D1O14617 1153 aa18.28■□□□□ 0.52
SNX4-201ENST00000251775 TEX28O15482 410 aa18.28■□□□□ 0.52
SNX4-201ENST00000251775 VIPP01282 170 aa18.28■□□□□ 0.52
SNX4-201ENST00000251775 SERPINA4P29622 427 aa18.28■□□□□ 0.52
SNX4-201ENST00000251775 CSNK2BP67870 215 aa18.28■□□□□ 0.52
SNX4-201ENST00000251775 CAMK2GQ13555 558 aaPredicted RBP18.28■□□□□ 0.52
SNX4-201ENST00000251775 Q6ZPB1 254 aaPredicted RBP18.28■□□□□ 0.52
SNX4-201ENST00000251775 P3H2Q8IVL5 708 aa18.28■□□□□ 0.52
SNX4-201ENST00000251775 REM2Q8IYK8 340 aaPredicted RBP18.28■□□□□ 0.52
SNX4-201ENST00000251775 HRASLS5Q96KN8 279 aa18.28■□□□□ 0.52
SNX4-201ENST00000251775 AMBNQ9NP70 447 aa18.28■□□□□ 0.52
SNX4-201ENST00000251775 MKLN1Q9UL63 735 aa18.28■□□□□ 0.52
SNX4-201ENST00000251775 TLL1O43897 1013 aa18.28■□□□□ 0.52
SNX4-201ENST00000251775 BNIP3LO60238 219 aa18.28■□□□□ 0.52
SNX4-201ENST00000251775 ULK1O75385 1050 aa18.28■□□□□ 0.52
SNX4-201ENST00000251775 GJA1P17302 382 aa18.28■□□□□ 0.52
SNX4-201ENST00000251775 DOK6Q6PKX4 331 aa18.28■□□□□ 0.52
SNX4-201ENST00000251775 PSD4Q8NDX1 1056 aa18.28■□□□□ 0.52
SNX4-201ENST00000251775 OR7G1Q8NGA0 311 aa18.28■□□□□ 0.52
SNX4-201ENST00000251775 FIBINQ8TAL6 211 aa18.28■□□□□ 0.52
SNX4-201ENST00000251775 ZNF689Q96CS4 500 aaPredicted RBP18.28■□□□□ 0.52
SNX4-201ENST00000251775 RDH14Q9HBH5 336 aa18.28■□□□□ 0.52
SNX4-201ENST00000251775 DDX28Q9NUL7 540 aaKnown RBP18.28■□□□□ 0.52
SNX4-201ENST00000251775 TRPS1Q9UHF7 1281 aa18.28■□□□□ 0.52
SNX4-201ENST00000251775 DOCK6Q96HP0 2047 aa18.27■□□□□ 0.52
SNX4-201ENST00000251775 MANBAO00462 879 aa18.27■□□□□ 0.52
SNX4-201ENST00000251775 EBLN1P0CF75 366 aa18.27■□□□□ 0.52
SNX4-201ENST00000251775 SRCP12931 536 aa18.27■□□□□ 0.52
SNX4-201ENST00000251775 UGT2B15P54855 530 aa18.27■□□□□ 0.52
SNX4-201ENST00000251775 B4GALNT1Q00973 533 aa18.27■□□□□ 0.52
SNX4-201ENST00000251775 ARHGEF7Q14155 803 aa18.27■□□□□ 0.52
SNX4-201ENST00000251775 MPPE1Q53F39 396 aa18.27■□□□□ 0.52
SNX4-201ENST00000251775 LRRC66Q68CR7 880 aa18.27■□□□□ 0.52
SNX4-201ENST00000251775 CCDC190Q86UF4 302 aa18.27■□□□□ 0.52
SNX4-201ENST00000251775 CPXM2Q8N436 756 aa18.27■□□□□ 0.52
SNX4-201ENST00000251775 ZNF675Q8TD23 568 aa18.27■□□□□ 0.52
SNX4-201ENST00000251775 MTFMTQ96DP5 389 aaKnown RBP18.27■□□□□ 0.52
SNX4-201ENST00000251775 LYSMD1Q96S90 227 aa18.27■□□□□ 0.52
SNX4-201ENST00000251775 AASDHPPTQ9NRN7 309 aa18.27■□□□□ 0.52
SNX4-201ENST00000251775 C14orf119Q9NWQ9 140 aa18.27■□□□□ 0.52
SNX4-201ENST00000251775 THUMPD1Q9NXG2 353 aaKnown RBP18.27■□□□□ 0.52
SNX4-201ENST00000251775 WBP11Q9Y2W2 641 aaKnown RBP18.27■□□□□ 0.52
SNX4-201ENST00000251775 H3BQ06 376 aaPredicted RBP18.27■□□□□ 0.52
SNX4-201ENST00000251775 WDR47O94967 919 aa18.27■□□□□ 0.52
SNX4-201ENST00000251775 CDK1P06493 297 aa18.27■□□□□ 0.52
SNX4-201ENST00000251775 EPB42P16452 691 aa18.27■□□□□ 0.52
SNX4-201ENST00000251775 EPORP19235 508 aa18.27■□□□□ 0.52
SNX4-201ENST00000251775 S100A3P33764 101 aa18.27■□□□□ 0.52
SNX4-201ENST00000251775 CDK10Q15131 360 aa18.27■□□□□ 0.52
SNX4-201ENST00000251775 BCL7AQ4VC05 210 aa18.27■□□□□ 0.52
SNX4-201ENST00000251775 DNAJC22Q8N4W6 341 aa18.27■□□□□ 0.52
SNX4-201ENST00000251775 ZNF296Q8WUU4 475 aaPredicted RBP18.27■□□□□ 0.52
SNX4-201ENST00000251775 GGHQ92820 318 aa18.27■□□□□ 0.52
SNX4-201ENST00000251775 ST6GAL2Q96JF0 529 aa18.27■□□□□ 0.52
SNX4-201ENST00000251775 TBC1D24Q9ULP9 559 aa18.27■□□□□ 0.52
SNX4-201ENST00000251775 DLGAP4Q9Y2H0 992 aa18.27■□□□□ 0.52
SNX4-201ENST00000251775 LYVE1Q9Y5Y7 322 aa18.27■□□□□ 0.52
SNX4-201ENST00000251775 STK16O75716 305 aa18.26■□□□□ 0.51
SNX4-201ENST00000251775 CCR7P32248 378 aa18.26■□□□□ 0.51
SNX4-201ENST00000251775 NSG1P42857 185 aa18.26■□□□□ 0.51
SNX4-201ENST00000251775 RPS14P62263 151 aaKnown RBP18.26■□□□□ 0.51
SNX4-201ENST00000251775 MRPS15P82914 257 aaKnown RBP18.26■□□□□ 0.51
SNX4-201ENST00000251775 TLE2Q04725 743 aa18.26■□□□□ 0.51
SNX4-201ENST00000251775 LRRC26Q2I0M4 334 aa18.26■□□□□ 0.51
SNX4-201ENST00000251775 TTLL9Q3SXZ7 439 aa18.26■□□□□ 0.51
SNX4-201ENST00000251775 ATP13A5Q4VNC0 1218 aa18.26■□□□□ 0.51
SNX4-201ENST00000251775 SPANXN2Q5MJ10 180 aa18.26■□□□□ 0.51
SNX4-201ENST00000251775 MPP7Q5T2T1 576 aa18.26■□□□□ 0.51
SNX4-201ENST00000251775 PPP2R2DQ66LE6 453 aa18.26■□□□□ 0.51
SNX4-201ENST00000251775 GPR153Q6NV75 609 aa18.26■□□□□ 0.51
SNX4-201ENST00000251775 CNKSR3Q6P9H4 555 aa18.26■□□□□ 0.51
SNX4-201ENST00000251775 RNF165Q6ZSG1 346 aa18.26■□□□□ 0.51
SNX4-201ENST00000251775 DDX53Q86TM3 631 aaKnown RBP18.26■□□□□ 0.51
SNX4-201ENST00000251775 MRPS31Q92665 395 aaKnown RBP18.26■□□□□ 0.51
SNX4-201ENST00000251775 USP7Q93009 1102 aa18.26■□□□□ 0.51
SNX4-201ENST00000251775 SCRN2Q96FV2 425 aa18.26■□□□□ 0.51
SNX4-201ENST00000251775 CHCHD6Q9BRQ6 235 aa18.26■□□□□ 0.51
SNX4-201ENST00000251775 SMG9Q9H0W8 520 aaKnown RBP18.26■□□□□ 0.51
SNX4-201ENST00000251775 PLCXD1Q9NUJ7 323 aa18.26■□□□□ 0.51
SNX4-201ENST00000251775 FKBP14Q9NWM8 211 aa18.26■□□□□ 0.51
SNX4-201ENST00000251775 ZDHHC3Q9NYG2 299 aa18.26■□□□□ 0.51
SNX4-201ENST00000251775 SPG21Q9NZD8 308 aa18.26■□□□□ 0.51
SNX4-201ENST00000251775 GPRC5BQ9NZH0 403 aa18.26■□□□□ 0.51
SNX4-201ENST00000251775 MBD1Q9UIS9 605 aaPredicted RBP18.26■□□□□ 0.51
SNX4-201ENST00000251775 PNMA8CA0A1B0GUJ8 204 aa18.26■□□□□ 0.51
SNX4-201ENST00000251775 SEMA3DO95025 777 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms