RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 TFEBP19484 476 aa12.13□□□□□ -0.47
VPREB3-201ENST00000248948 CXCR2P25025 360 aa12.13□□□□□ -0.47
VPREB3-201ENST00000248948 MAGEA12P43365 314 aa12.13□□□□□ -0.47
VPREB3-201ENST00000248948 SCTRP47872 440 aa12.13□□□□□ -0.47
VPREB3-201ENST00000248948 SKP1P63208 163 aa12.13□□□□□ -0.47
VPREB3-201ENST00000248948 FAM83EQ2M2I3 478 aa12.13□□□□□ -0.47
VPREB3-201ENST00000248948 KLC3Q6P597 504 aa12.13□□□□□ -0.47
VPREB3-201ENST00000248948 NXPE4Q6UWF7 544 aa12.13□□□□□ -0.47
VPREB3-201ENST00000248948 ISCA2Q86U28 154 aa12.13□□□□□ -0.47
VPREB3-201ENST00000248948 HPS6Q86YV9 775 aa12.13□□□□□ -0.47
VPREB3-201ENST00000248948 CLEC1AQ8NC01 280 aa12.13□□□□□ -0.47
VPREB3-201ENST00000248948 NT5CQ8TCD5 201 aa12.13□□□□□ -0.47
VPREB3-201ENST00000248948 STT3BQ8TCJ2 826 aa12.13□□□□□ -0.47
VPREB3-201ENST00000248948 SLC13A3Q8WWT9 602 aa12.13□□□□□ -0.47
VPREB3-201ENST00000248948 MIEF2Q96C03 454 aa12.13□□□□□ -0.47
VPREB3-201ENST00000248948 MMABQ96EY8 250 aaPredicted RBP12.13□□□□□ -0.47
VPREB3-201ENST00000248948 CRB3Q9BUF7 120 aa12.13□□□□□ -0.47
VPREB3-201ENST00000248948 PITHD1Q9GZP4 211 aaPredicted RBP12.13□□□□□ -0.47
VPREB3-201ENST00000248948 SOX17Q9H6I2 414 aaPredicted RBP12.13□□□□□ -0.47
VPREB3-201ENST00000248948 ALG9Q9H6U8 611 aa12.13□□□□□ -0.47
VPREB3-201ENST00000248948 ANKHQ9HCJ1 492 aa12.13□□□□□ -0.47
VPREB3-201ENST00000248948 MLXIPLQ9NP71 852 aa12.13□□□□□ -0.47
VPREB3-201ENST00000248948 DNAJC11Q9NVH1 559 aa12.13□□□□□ -0.47
VPREB3-201ENST00000248948 P4HTMQ9NXG6 502 aa12.13□□□□□ -0.47
VPREB3-201ENST00000248948 CD274Q9NZQ7 290 aa12.13□□□□□ -0.47
VPREB3-201ENST00000248948 TRPC4Q9UBN4 977 aa12.13□□□□□ -0.47
VPREB3-201ENST00000248948 TP53TG5Q9Y2B4 290 aa12.13□□□□□ -0.47
VPREB3-201ENST00000248948 PCDHGB7Q9Y5F8 929 aa12.13□□□□□ -0.47
VPREB3-201ENST00000248948 HELZ2Q9BYK8 2649 aaKnown RBP12.13□□□□□ -0.47
VPREB3-201ENST00000248948 SCN3AQ9NY46 2000 aa12.13□□□□□ -0.47
VPREB3-201ENST00000248948 A0A0A6YYC8 382 aaPredicted RBP12.12□□□□□ -0.47
VPREB3-201ENST00000248948 EXOC1LA0A1B0GW35 172 aa12.12□□□□□ -0.47
VPREB3-201ENST00000248948 A0A1W2PQ72 361 aa12.12□□□□□ -0.47
VPREB3-201ENST00000248948 I3L1I5 382 aaPredicted RBP12.12□□□□□ -0.47
VPREB3-201ENST00000248948 TAPBPO15533 448 aa12.12□□□□□ -0.47
VPREB3-201ENST00000248948 OR1F1O43749 312 aa12.12□□□□□ -0.47
VPREB3-201ENST00000248948 KLHL41O60662 606 aa12.12□□□□□ -0.47
VPREB3-201ENST00000248948 STK16O75716 305 aa12.12□□□□□ -0.47
VPREB3-201ENST00000248948 KLHL2O95198 593 aa12.12□□□□□ -0.47
VPREB3-201ENST00000248948 C2P06681 752 aa12.12□□□□□ -0.47
VPREB3-201ENST00000248948 RHOXF2BP0C7M4 288 aa12.12□□□□□ -0.47
VPREB3-201ENST00000248948 TNFRSF8P28908 595 aa12.12□□□□□ -0.47
VPREB3-201ENST00000248948 TYK2P29597 1187 aa12.12□□□□□ -0.47
VPREB3-201ENST00000248948 PGDP52209 483 aa12.12□□□□□ -0.47
VPREB3-201ENST00000248948 MEF2AQ02078 507 aaPredicted RBP12.12□□□□□ -0.47
VPREB3-201ENST00000248948 KLC1Q07866 573 aa12.12□□□□□ -0.47
VPREB3-201ENST00000248948 RGS1Q08116 209 aa12.12□□□□□ -0.47
VPREB3-201ENST00000248948 DLG1Q12959 904 aa12.12□□□□□ -0.47
VPREB3-201ENST00000248948 CHAF1BQ13112 559 aa12.12□□□□□ -0.47
VPREB3-201ENST00000248948 COL9A2Q14055 689 aaPredicted RBP12.12□□□□□ -0.47
VPREB3-201ENST00000248948 HERC3Q15034 1050 aa12.12□□□□□ -0.47
VPREB3-201ENST00000248948 RBBP7Q16576 425 aa12.12□□□□□ -0.47
VPREB3-201ENST00000248948 PDK4Q16654 411 aa12.12□□□□□ -0.47
VPREB3-201ENST00000248948 DCAF10Q5QP82 559 aa12.12□□□□□ -0.47
VPREB3-201ENST00000248948 ATG9BQ674R7 924 aa12.12□□□□□ -0.47
VPREB3-201ENST00000248948 ZC3H7AQ8IWR0 971 aaKnown RBP12.12□□□□□ -0.47
VPREB3-201ENST00000248948 AFAP1L2Q8N4X5 818 aa12.12□□□□□ -0.47
VPREB3-201ENST00000248948 TRPV3Q8NET8 790 aa12.12□□□□□ -0.47
VPREB3-201ENST00000248948 TTLQ8NG68 377 aa12.12□□□□□ -0.47
VPREB3-201ENST00000248948 KCTD4Q8WVF5 259 aa12.12□□□□□ -0.47
VPREB3-201ENST00000248948 EXT2Q93063 718 aa12.12□□□□□ -0.47
VPREB3-201ENST00000248948 MRRFQ96E11 262 aaKnown RBP12.12□□□□□ -0.47
VPREB3-201ENST00000248948 WDR34Q96EX3 536 aa12.12□□□□□ -0.47
VPREB3-201ENST00000248948 RHOXF2Q9BQY4 288 aa12.12□□□□□ -0.47
VPREB3-201ENST00000248948 SLC25A23Q9BV35 468 aa12.12□□□□□ -0.47
VPREB3-201ENST00000248948 SPNS1Q9H2V7 528 aa12.12□□□□□ -0.47
VPREB3-201ENST00000248948 FETUBQ9UGM5 382 aa12.12□□□□□ -0.47
VPREB3-201ENST00000248948 ANAPC2Q9UJX6 822 aa12.12□□□□□ -0.47
VPREB3-201ENST00000248948 PTBP2Q9UKA9 531 aaKnown RBP12.12□□□□□ -0.47
VPREB3-201ENST00000248948 MRPS2Q9Y399 296 aaKnown RBP12.12□□□□□ -0.47
VPREB3-201ENST00000248948 HEMK1Q9Y5R4 338 aaPredicted RBP12.12□□□□□ -0.47
VPREB3-201ENST00000248948 HS3ST3B1Q9Y662 390 aa12.12□□□□□ -0.47
VPREB3-201ENST00000248948 SPENQ96T58 3664 aaKnown RBP12.12□□□□□ -0.47
VPREB3-201ENST00000248948 SUPT3HB4E1H0 165 aa12.11□□□□□ -0.47
VPREB3-201ENST00000248948 SOCS6O14544 535 aa12.11□□□□□ -0.47
VPREB3-201ENST00000248948 RIPK2O43353 540 aa12.11□□□□□ -0.47
VPREB3-201ENST00000248948 LCMT2O60294 686 aaKnown RBP12.11□□□□□ -0.47
VPREB3-201ENST00000248948 SUPT3HO75486 399 aa12.11□□□□□ -0.47
VPREB3-201ENST00000248948 ATXN8OSP0DMR3 200 aa12.11□□□□□ -0.47
VPREB3-201ENST00000248948 C1GALT1C1LP0DN25 315 aa12.11□□□□□ -0.47
VPREB3-201ENST00000248948 IL1RNP18510 177 aa12.11□□□□□ -0.47
VPREB3-201ENST00000248948 GDF5P43026 501 aa12.11□□□□□ -0.47
VPREB3-201ENST00000248948 MSH2P43246 934 aa12.11□□□□□ -0.47
VPREB3-201ENST00000248948 HSPA7P48741 367 aa12.11□□□□□ -0.47
VPREB3-201ENST00000248948 SOX8P57073 446 aa12.11□□□□□ -0.47
VPREB3-201ENST00000248948 FOXL2P58012 376 aa12.11□□□□□ -0.47
VPREB3-201ENST00000248948 IRF9Q00978 393 aa12.11□□□□□ -0.47
VPREB3-201ENST00000248948 E2F2Q14209 437 aa12.11□□□□□ -0.47
VPREB3-201ENST00000248948 ACAP2Q15057 778 aa12.11□□□□□ -0.47
VPREB3-201ENST00000248948 TUBB8Q3ZCM7 444 aa12.11□□□□□ -0.47
VPREB3-201ENST00000248948 SLCO4C1Q6ZQN7 724 aa12.11□□□□□ -0.47
VPREB3-201ENST00000248948 ABHD13Q7L211 337 aa12.11□□□□□ -0.47
VPREB3-201ENST00000248948 ZNF605Q86T29 641 aa12.11□□□□□ -0.47
VPREB3-201ENST00000248948 KRT78Q8N1N4 520 aa12.11□□□□□ -0.47
VPREB3-201ENST00000248948 KCT2Q8NC54 265 aa12.11□□□□□ -0.47
VPREB3-201ENST00000248948 OR9A4Q8NGU2 314 aa12.11□□□□□ -0.47
VPREB3-201ENST00000248948 ZCCHC10Q8TBK6 192 aa12.11□□□□□ -0.47
VPREB3-201ENST00000248948 DCAKDQ8WVC6 231 aa12.11□□□□□ -0.47
VPREB3-201ENST00000248948 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.11□□□□□ -0.47
VPREB3-201ENST00000248948 EFCAB11Q9BUY7 163 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms