RNA–Protein interactions for RNA: ENST00000246868.6

SBDS-201, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SBDS, Length 1,631 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-201ENST00000246868 SEC22BO75396 215 aa18.37■□□□□ 0.53
SBDS-201ENST00000246868 RPLP0P05388 317 aaKnown RBP18.37■□□□□ 0.53
SBDS-201ENST00000246868 SERPIND1P05546 499 aa18.37■□□□□ 0.53
SBDS-201ENST00000246868 PRR35P0CG20 571 aa18.37■□□□□ 0.53
SBDS-201ENST00000246868 PRPH2P23942 346 aa18.37■□□□□ 0.53
SBDS-201ENST00000246868 SQSTM1Q13501 440 aa18.37■□□□□ 0.53
SBDS-201ENST00000246868 SMU1Q2TAY7 513 aa18.37■□□□□ 0.53
SBDS-201ENST00000246868 CACHD1Q5VU97 1274 aa18.37■□□□□ 0.53
SBDS-201ENST00000246868 CHSY3Q70JA7 882 aa18.37■□□□□ 0.53
SBDS-201ENST00000246868 RERGQ96A58 199 aaPredicted RBP18.37■□□□□ 0.53
SBDS-201ENST00000246868 TCTN2Q96GX1 697 aa18.37■□□□□ 0.53
SBDS-201ENST00000246868 METTL2AQ96IZ6 378 aaKnown RBP18.37■□□□□ 0.53
SBDS-201ENST00000246868 GIMAP2Q9UG22 337 aa18.37■□□□□ 0.53
SBDS-201ENST00000246868 KLHL3Q9UH77 587 aa18.37■□□□□ 0.53
SBDS-201ENST00000246868 COL5A1P20908 1838 aaPredicted RBP18.36■□□□□ 0.53
SBDS-201ENST00000246868 NPIPB8E9PQR5 432 aa18.36■□□□□ 0.53
SBDS-201ENST00000246868 EBAG9O00559 213 aa18.36■□□□□ 0.53
SBDS-201ENST00000246868 FCHO1O14526 889 aa18.36■□□□□ 0.53
SBDS-201ENST00000246868 ZBTB11O95625 1053 aaPredicted RBP18.36■□□□□ 0.53
SBDS-201ENST00000246868 CPNE6O95741 557 aa18.36■□□□□ 0.53
SBDS-201ENST00000246868 TGFB1P01137 390 aa18.36■□□□□ 0.53
SBDS-201ENST00000246868 C9P02748 559 aa18.36■□□□□ 0.53
SBDS-201ENST00000246868 CD59P13987 128 aa18.36■□□□□ 0.53
SBDS-201ENST00000246868 RPL38P63173 70 aaKnown RBP18.36■□□□□ 0.53
SBDS-201ENST00000246868 CLPPQ16740 277 aaPredicted RBP18.36■□□□□ 0.53
SBDS-201ENST00000246868 ZC3H12BQ5HYM0 836 aaKnown RBP18.36■□□□□ 0.53
SBDS-201ENST00000246868 TMEM198Q66K66 360 aa18.36■□□□□ 0.53
SBDS-201ENST00000246868 FBXO42Q6P3S6 717 aa18.36■□□□□ 0.53
SBDS-201ENST00000246868 VN1R5Q7Z5H4 357 aa18.36■□□□□ 0.53
SBDS-201ENST00000246868 ZFAND4Q86XD8 727 aa18.36■□□□□ 0.53
SBDS-201ENST00000246868 NAXDQ8IW45 347 aa18.36■□□□□ 0.53
SBDS-201ENST00000246868 PARP9Q8IXQ6 854 aa18.36■□□□□ 0.53
SBDS-201ENST00000246868 CATSPER2Q96P56 530 aa18.36■□□□□ 0.53
SBDS-201ENST00000246868 NMUR2Q9GZQ4 415 aa18.36■□□□□ 0.53
SBDS-201ENST00000246868 LRRN3Q9H3W5 708 aa18.36■□□□□ 0.53
SBDS-201ENST00000246868 SYNDIG1Q9H7V2 258 aa18.36■□□□□ 0.53
SBDS-201ENST00000246868 PARD6AQ9NPB6 346 aa18.36■□□□□ 0.53
SBDS-201ENST00000246868 RXFP3Q9NSD7 469 aa18.36■□□□□ 0.53
SBDS-201ENST00000246868 SOHLH2Q9NX45 425 aa18.36■□□□□ 0.53
SBDS-201ENST00000246868 G3BP2Q9UN86 482 aaKnown RBP18.36■□□□□ 0.53
SBDS-201ENST00000246868 TMED5Q9Y3A6 229 aa18.36■□□□□ 0.53
SBDS-201ENST00000246868 HCN4Q9Y3Q4 1203 aa18.36■□□□□ 0.53
SBDS-201ENST00000246868 EP300Q09472 2414 aaPredicted RBP18.35■□□□□ 0.53
SBDS-201ENST00000246868 A0A0J9YVX5 310 aa18.35■□□□□ 0.53
SBDS-201ENST00000246868 C4orf47A7E2U8 309 aa18.35■□□□□ 0.53
SBDS-201ENST00000246868 KIF1CO43896 1103 aaKnown RBP18.35■□□□□ 0.53
SBDS-201ENST00000246868 CTSVO60911 334 aa18.35■□□□□ 0.53
SBDS-201ENST00000246868 SH3BGRLO75368 114 aa18.35■□□□□ 0.53
SBDS-201ENST00000246868 HOXB3P14651 431 aaPredicted RBP18.35■□□□□ 0.53
SBDS-201ENST00000246868 MAPK1P28482 360 aa18.35■□□□□ 0.53
SBDS-201ENST00000246868 CSF2RBP32927 897 aa18.35■□□□□ 0.53
SBDS-201ENST00000246868 ARL4DP49703 201 aa18.35■□□□□ 0.53
SBDS-201ENST00000246868 STX1BP61266 288 aa18.35■□□□□ 0.53
SBDS-201ENST00000246868 IRX1P78414 480 aaPredicted RBP18.35■□□□□ 0.53
SBDS-201ENST00000246868 CCL7P80098 99 aa18.35■□□□□ 0.53
SBDS-201ENST00000246868 EMX2Q04743 252 aa18.35■□□□□ 0.53
SBDS-201ENST00000246868 ACSM2AQ08AH3 577 aa18.35■□□□□ 0.53
SBDS-201ENST00000246868 CUL3Q13618 768 aa18.35■□□□□ 0.53
SBDS-201ENST00000246868 RPS6KA2Q15349 733 aa18.35■□□□□ 0.53
SBDS-201ENST00000246868 ZIC1Q15915 447 aa18.35■□□□□ 0.53
SBDS-201ENST00000246868 SPIN4Q56A73 249 aa18.35■□□□□ 0.53
SBDS-201ENST00000246868 ACSM2BQ68CK6 577 aa18.35■□□□□ 0.53
SBDS-201ENST00000246868 TMEM71Q6P5X7 295 aa18.35■□□□□ 0.53
SBDS-201ENST00000246868 RNF44Q7L0R7 432 aa18.35■□□□□ 0.53
SBDS-201ENST00000246868 TRPM8Q7Z2W7 1104 aa18.35■□□□□ 0.53
SBDS-201ENST00000246868 ZNF655Q8N720 491 aaPredicted RBP18.35■□□□□ 0.53
SBDS-201ENST00000246868 MS4A8Q9BY19 250 aa18.35■□□□□ 0.53
SBDS-201ENST00000246868 OR51B5Q9H339 312 aa18.35■□□□□ 0.53
SBDS-201ENST00000246868 AHSPQ9NZD4 102 aa18.35■□□□□ 0.53
SBDS-201ENST00000246868 NOP53Q9NZM5 478 aaKnown RBP18.35■□□□□ 0.53
SBDS-201ENST00000246868 PILRAQ9UKJ1 303 aa18.35■□□□□ 0.53
SBDS-201ENST00000246868 EIF3LQ9Y262 564 aaKnown RBP18.35■□□□□ 0.53
SBDS-201ENST00000246868 NDUFS4O43181 175 aa18.34■□□□□ 0.53
SBDS-201ENST00000246868 SH3BP5O60239 455 aa18.34■□□□□ 0.53
SBDS-201ENST00000246868 MYO1DO94832 1006 aa18.34■□□□□ 0.53
SBDS-201ENST00000246868 GP1BAP07359 652 aa18.34■□□□□ 0.53
SBDS-201ENST00000246868 SLC35G6P0C7Q6 338 aa18.34■□□□□ 0.53
SBDS-201ENST00000246868 IDO1P14902 403 aa18.34■□□□□ 0.53
SBDS-201ENST00000246868 ACP1P24666 158 aa18.34■□□□□ 0.53
SBDS-201ENST00000246868 MLLT3P42568 568 aaPredicted RBP18.34■□□□□ 0.53
SBDS-201ENST00000246868 RAP1GDS1P52306 607 aa18.34■□□□□ 0.53
SBDS-201ENST00000246868 RGS1Q08116 209 aa18.34■□□□□ 0.53
SBDS-201ENST00000246868 SNAP47Q5SQN1 464 aa18.34■□□□□ 0.53
SBDS-201ENST00000246868 KHDRBS2Q5VWX1 349 aaKnown RBP18.34■□□□□ 0.53
SBDS-201ENST00000246868 ASPGQ86U10 573 aa18.34■□□□□ 0.53
SBDS-201ENST00000246868 CREB3L4Q8TEY5 395 aa18.34■□□□□ 0.53
SBDS-201ENST00000246868 SLC13A3Q8WWT9 602 aa18.34■□□□□ 0.53
SBDS-201ENST00000246868 ERP27Q96DN0 273 aa18.34■□□□□ 0.53
SBDS-201ENST00000246868 OR2A5Q96R48 311 aa18.34■□□□□ 0.53
SBDS-201ENST00000246868 NUDT22Q9BRQ3 303 aa18.34■□□□□ 0.53
SBDS-201ENST00000246868 CHRNA10Q9GZZ6 450 aa18.34■□□□□ 0.53
SBDS-201ENST00000246868 PDE7BQ9NP56 450 aa18.34■□□□□ 0.53
SBDS-201ENST00000246868 SAR1AQ9NR31 198 aa18.34■□□□□ 0.53
SBDS-201ENST00000246868 IGHV5-51A0A0C4DH38 117 aa18.34■□□□□ 0.53
SBDS-201ENST00000246868 TOX3O15405 576 aaPredicted RBP18.34■□□□□ 0.53
SBDS-201ENST00000246868 SEMA3DO95025 777 aa18.34■□□□□ 0.53
SBDS-201ENST00000246868 ETHE1O95571 254 aa18.34■□□□□ 0.53
SBDS-201ENST00000246868 STXBP1P61764 594 aaKnown RBP18.34■□□□□ 0.53
SBDS-201ENST00000246868 CFHR1Q03591 330 aa18.34■□□□□ 0.53
SBDS-201ENST00000246868 PWP1Q13610 501 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms