RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 CSNK1DP48730 415 aa16.22■□□□□ 0.19
SSPN-201ENST00000242729 CRISP3P54108 245 aa16.22■□□□□ 0.19
SSPN-201ENST00000242729 CDH12P55289 794 aa16.22■□□□□ 0.19
SSPN-201ENST00000242729 RPS26P62854 115 aaKnown RBP16.22■□□□□ 0.19
SSPN-201ENST00000242729 HBA1P69905 142 aa16.22■□□□□ 0.19
SSPN-201ENST00000242729 NPRL3Q12980 569 aa16.22■□□□□ 0.19
SSPN-201ENST00000242729 SMU1Q2TAY7 513 aa16.22■□□□□ 0.19
SSPN-201ENST00000242729 PAGE2Q7Z2X7 111 aa16.22■□□□□ 0.19
SSPN-201ENST00000242729 DDX53Q86TM3 631 aaKnown RBP16.22■□□□□ 0.19
SSPN-201ENST00000242729 ADIPOR2Q86V24 386 aa16.22■□□□□ 0.19
SSPN-201ENST00000242729 WDR48Q8TAF3 677 aa16.22■□□□□ 0.19
SSPN-201ENST00000242729 ASAH2Q9NR71 780 aa16.22■□□□□ 0.19
SSPN-201ENST00000242729 SPASTQ9UBP0 616 aa16.22■□□□□ 0.19
SSPN-201ENST00000242729 ERGIC3Q9Y282 383 aa16.22■□□□□ 0.19
SSPN-201ENST00000242729 ZNF510Q9Y2H8 683 aa16.22■□□□□ 0.19
SSPN-201ENST00000242729 SCAMP2O15127 329 aaKnown RBP16.22■□□□□ 0.19
SSPN-201ENST00000242729 SUV39H1O43463 412 aa16.22■□□□□ 0.19
SSPN-201ENST00000242729 RGS10O43665 173 aa16.22■□□□□ 0.19
SSPN-201ENST00000242729 ATP6V1G1O75348 118 aa16.22■□□□□ 0.19
SSPN-201ENST00000242729 GCM2O75603 506 aaPredicted RBP16.22■□□□□ 0.19
SSPN-201ENST00000242729 FGF18O76093 207 aa16.22■□□□□ 0.19
SSPN-201ENST00000242729 CXCL10P02778 98 aa16.22■□□□□ 0.19
SSPN-201ENST00000242729 HSMCR30P0CW71 290 aa16.22■□□□□ 0.19
SSPN-201ENST00000242729 GPX2P18283 190 aa16.22■□□□□ 0.19
SSPN-201ENST00000242729 SOAT1P35610 550 aa16.22■□□□□ 0.19
SSPN-201ENST00000242729 SLC19A1P41440 591 aa16.22■□□□□ 0.19
SSPN-201ENST00000242729 GABARAPL2P60520 117 aa16.22■□□□□ 0.19
SSPN-201ENST00000242729 DEFB115Q30KQ5 88 aa16.22■□□□□ 0.19
SSPN-201ENST00000242729 HMGN2P46Q86SG4 172 aa16.22■□□□□ 0.19
SSPN-201ENST00000242729 ENTHD1Q8IYW4 607 aa16.22■□□□□ 0.19
SSPN-201ENST00000242729 KREMEN2Q8NCW0 462 aa16.22■□□□□ 0.19
SSPN-201ENST00000242729 OR9Q2Q8NGE9 314 aa16.22■□□□□ 0.19
SSPN-201ENST00000242729 GTPBP3Q969Y2 492 aaKnown RBP16.22■□□□□ 0.19
SSPN-201ENST00000242729 ZSWIM3Q96MP5 696 aa16.22■□□□□ 0.19
SSPN-201ENST00000242729 TCF25Q9BQ70 676 aa16.22■□□□□ 0.19
SSPN-201ENST00000242729 TMEM39AQ9NV64 488 aa16.22■□□□□ 0.19
SSPN-201ENST00000242729 PCDHB11Q9Y5F2 797 aa16.22■□□□□ 0.19
SSPN-201ENST00000242729 CFAP20Q9Y6A4 193 aaKnown RBP16.22■□□□□ 0.19
SSPN-201ENST00000242729 LOC100506127A0A0U1RQW1 187 aa16.21■□□□□ 0.19
SSPN-201ENST00000242729 HLA-EP13747 358 aa16.21■□□□□ 0.19
SSPN-201ENST00000242729 CD36P16671 472 aa16.21■□□□□ 0.19
SSPN-201ENST00000242729 HPCAL1P37235 193 aa16.21■□□□□ 0.19
SSPN-201ENST00000242729 KCNJ10P78508 379 aa16.21■□□□□ 0.19
SSPN-201ENST00000242729 SRSF11Q05519 484 aaKnown RBP16.21■□□□□ 0.19
SSPN-201ENST00000242729 MTAPQ13126 283 aa16.21■□□□□ 0.19
SSPN-201ENST00000242729 TP53BP2Q13625 1128 aa16.21■□□□□ 0.19
SSPN-201ENST00000242729 RGNQ15493 299 aa16.21■□□□□ 0.19
SSPN-201ENST00000242729 INAQ16352 499 aa16.21■□□□□ 0.19
SSPN-201ENST00000242729 GGTA1PQ4G0N0 100 aa16.21■□□□□ 0.19
SSPN-201ENST00000242729 KIAA1614Q5VZ46 1190 aa16.21■□□□□ 0.19
SSPN-201ENST00000242729 FAM43BQ6ZT52 329 aaPredicted RBP16.21■□□□□ 0.19
SSPN-201ENST00000242729 ANKRD13BQ86YJ7 626 aa16.21■□□□□ 0.19
SSPN-201ENST00000242729 TRAPPC5Q8IUR0 188 aa16.21■□□□□ 0.19
SSPN-201ENST00000242729 SLC5A8Q8N695 610 aa16.21■□□□□ 0.19
SSPN-201ENST00000242729 APH1BQ8WW43 257 aa16.21■□□□□ 0.19
SSPN-201ENST00000242729 TRUB1Q8WWH5 349 aaKnown RBP16.21■□□□□ 0.19
SSPN-201ENST00000242729 CLP1Q92989 425 aaKnown RBP16.21■□□□□ 0.19
SSPN-201ENST00000242729 AP2M1Q96CW1 435 aa16.21■□□□□ 0.19
SSPN-201ENST00000242729 LMLNQ96KR4 655 aa16.21■□□□□ 0.19
SSPN-201ENST00000242729 ACOT13Q9NPJ3 140 aa16.21■□□□□ 0.19
SSPN-201ENST00000242729 GPATCH2Q9NW75 528 aa16.21■□□□□ 0.19
SSPN-201ENST00000242729 C5AR2Q9P296 337 aa16.21■□□□□ 0.19
SSPN-201ENST00000242729 RPS6KA6Q9UK32 745 aa16.21■□□□□ 0.19
SSPN-201ENST00000242729 EXO1Q9UQ84 846 aaKnown RBP16.21■□□□□ 0.19
SSPN-201ENST00000242729 TPRKBQ9Y3C4 175 aa16.21■□□□□ 0.19
SSPN-201ENST00000242729 SNX8Q9Y5X2 465 aa16.21■□□□□ 0.19
SSPN-201ENST00000242729 CLDN25C9JDP6 229 aa16.21■□□□□ 0.19
SSPN-201ENST00000242729 SULT1C4O75897 302 aa16.21■□□□□ 0.19
SSPN-201ENST00000242729 MYO1DO94832 1006 aa16.21■□□□□ 0.19
SSPN-201ENST00000242729 CCDC159P0C7I6 412 aa16.21■□□□□ 0.19
SSPN-201ENST00000242729 TIMP2P16035 220 aa16.21■□□□□ 0.19
SSPN-201ENST00000242729 SLC7A9P82251 487 aa16.21■□□□□ 0.19
SSPN-201ENST00000242729 TMEM115Q12893 351 aaPredicted RBP16.21■□□□□ 0.19
SSPN-201ENST00000242729 PLEKHS1Q5SXH7 462 aa16.21■□□□□ 0.19
SSPN-201ENST00000242729 CBLL1Q75N03 491 aa16.21■□□□□ 0.19
SSPN-201ENST00000242729 EIF3MQ7L2H7 374 aaKnown RBP16.21■□□□□ 0.19
SSPN-201ENST00000242729 TCAIMQ8N3R3 496 aa16.21■□□□□ 0.19
SSPN-201ENST00000242729 NFKBIDQ8NI38 313 aa16.21■□□□□ 0.19
SSPN-201ENST00000242729 TAMM41Q96BW9 452 aa16.21■□□□□ 0.19
SSPN-201ENST00000242729 APOL4Q9BPW4 351 aa16.21■□□□□ 0.19
SSPN-201ENST00000242729 NIPSNAP1Q9BPW8 284 aa16.21■□□□□ 0.19
SSPN-201ENST00000242729 GPR83Q9NYM4 423 aa16.21■□□□□ 0.19
SSPN-201ENST00000242729 RUVBL1Q9Y265 456 aaKnown RBP16.21■□□□□ 0.19
SSPN-201ENST00000242729 TMED5Q9Y3A6 229 aa16.21■□□□□ 0.19
SSPN-201ENST00000242729 ITGAMP11215 1152 aa16.21■□□□□ 0.18
SSPN-201ENST00000242729 BMP4P12644 408 aa16.21■□□□□ 0.18
SSPN-201ENST00000242729 PTGER1P34995 402 aa16.21■□□□□ 0.18
SSPN-201ENST00000242729 LIPAP38571 399 aa16.21■□□□□ 0.18
SSPN-201ENST00000242729 BCAP31P51572 246 aa16.21■□□□□ 0.18
SSPN-201ENST00000242729 RELAQ04206 551 aa16.21■□□□□ 0.18
SSPN-201ENST00000242729 TOP3AQ13472 1001 aaPredicted RBP16.21■□□□□ 0.18
SSPN-201ENST00000242729 PRSS53Q2L4Q9 553 aa16.21■□□□□ 0.18
SSPN-201ENST00000242729 CAPN13Q6MZZ7 669 aaPredicted RBP16.21■□□□□ 0.18
SSPN-201ENST00000242729 SPRED2Q7Z698 418 aa16.21■□□□□ 0.18
SSPN-201ENST00000242729 TSEN54Q7Z6J9 526 aaKnown RBP16.21■□□□□ 0.18
SSPN-201ENST00000242729 DSG4Q86SJ6 1040 aa16.21■□□□□ 0.18
SSPN-201ENST00000242729 NPAS3Q8IXF0 933 aa16.21■□□□□ 0.18
SSPN-201ENST00000242729 CPXM2Q8N436 756 aa16.21■□□□□ 0.18
SSPN-201ENST00000242729 SLAIN1Q8ND83 568 aa16.21■□□□□ 0.18
SSPN-201ENST00000242729 SETD9Q8NE22 299 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms