RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 STUB1Q9UNE7 303 aa13.4□□□□□ -0.26
HCFC2-201ENST00000229330 MYH7P12883 1935 aa13.4□□□□□ -0.27
HCFC2-201ENST00000229330 C7orf72A4D263 438 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 HMX3A6NHT5 357 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 FZD9O00144 591 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 PRODHO43272 600 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 MRPS14O60783 128 aaKnown RBP13.39□□□□□ -0.27
HCFC2-201ENST00000229330 FOSL2P15408 326 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 SMPD1P17405 629 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 NSG1P42857 185 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 FNTBP49356 437 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 CRISP3P54108 245 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 SGCGQ13326 291 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 TUSC3Q13454 348 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 GRB14Q14449 540 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 LINGO4Q6UY18 593 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 AGMOQ6ZNB7 445 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 RANBP3LQ86VV4 465 aaPredicted RBP13.39□□□□□ -0.27
HCFC2-201ENST00000229330 SETD6Q8TBK2 473 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 CST11Q9H112 138 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 A0A075B6Q4 140 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 A0A096LPI6 279 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 ARL6IP5O75915 188 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 PRH1P02810 166 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 NPR2P20594 1047 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 LEPRP48357 1165 aaKnown RBP13.39□□□□□ -0.27
HCFC2-201ENST00000229330 CDH11P55287 796 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 FOXB2Q5VYV0 432 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 PAQR7Q86WK9 346 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 WDTC1Q8N5D0 677 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 GDPD1Q8N9F7 314 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 ZNF548Q8NEK5 533 aaPredicted RBP13.39□□□□□ -0.27
HCFC2-201ENST00000229330 THAP6Q8TBB0 222 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 SLC9A6Q92581 669 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 ZNF382Q96SR6 550 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 BTBD1Q9H0C5 482 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 DISC1C4P0D8 188 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 OR10H2O60403 315 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 TOXO94900 526 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 LCKP06239 509 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 CA5AP35218 305 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 KHKP50053 298 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 SMAD3P84022 425 aaKnown RBP13.39□□□□□ -0.27
HCFC2-201ENST00000229330 NDUFA9Q16795 377 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 MEDAGQ5VYS4 303 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 DLK2Q6UY11 383 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 RPLP0P6Q8NHW5 317 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 TSNAXQ99598 290 aaKnown RBP13.39□□□□□ -0.27
HCFC2-201ENST00000229330 COMMD4Q9H0A8 199 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 MRPL17Q9NRX2 175 aaKnown RBP13.39□□□□□ -0.27
HCFC2-201ENST00000229330 ZNF639Q9UID6 485 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 MGAT4AQ9UM21 535 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 IRAK2O43187 625 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 EEF1E1O43324 174 aaKnown RBP13.39□□□□□ -0.27
HCFC2-201ENST00000229330 PRAMEF12O95522 483 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 STC1P52823 247 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 DSG2Q14126 1118 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 SPHARQ15513 63 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 C22orf42Q6IC83 251 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 FAM109AQ8N4B1 249 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 FRS2Q8WU20 508 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 FAM129BQ96TA1 746 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 TRIM2Q9C040 744 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 OCEL1Q9H607 264 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 MGAT4BQ9UQ53 548 aa13.39□□□□□ -0.27
HCFC2-201ENST00000229330 HAS3O00219 553 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 FKTNO75072 461 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 ITGA10O75578 1167 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 EBLN1P0CF75 366 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 CD1DP15813 335 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 AGXTP21549 392 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 AGTR2P50052 363 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 SLC3A1Q07837 685 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 EIF5AL1Q6IS14 154 aaKnown RBP13.38□□□□□ -0.27
HCFC2-201ENST00000229330 LRRC70Q7Z2Q7 622 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 ADGRG5Q8IZF4 528 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 SAMD12Q8N8I0 201 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 OR5AK3PQ8NH89 298 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 TCEAL4Q96EI5 215 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 ZNF599Q96NL3 588 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 ACBD6Q9BR61 282 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 LGR4Q9BXB1 951 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 ABCG5Q9H222 651 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 RBPJLQ9UBG7 517 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 STYXL1Q9Y6J8 313 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 CLCA1A8K7I4 914 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 WNT9AO14904 365 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 PCSK6P29122 969 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 PGGT1BP53609 377 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 SKP1P63208 163 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 JAG1P78504 1218 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 SLC10A2Q12908 348 aaPredicted RBP13.38□□□□□ -0.27
HCFC2-201ENST00000229330 SLC36A4Q6YBV0 504 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 ZFAND4Q86XD8 727 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 ARMC10Q8N2F6 343 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 ZNF366Q8N895 744 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 OR5J2Q8NH18 312 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 NEIL3Q8TAT5 605 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 FAM110BQ8TC76 370 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 GON7Q9BXV9 100 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms