RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 HERC3Q15034 1050 aa16.55■□□□□ 0.24
MRPL28-201ENST00000199706 PDK4Q16654 411 aa16.55■□□□□ 0.24
MRPL28-201ENST00000199706 FAM153CQ494X1 144 aa16.55■□□□□ 0.24
MRPL28-201ENST00000199706 CATSPEREQ5SY80 951 aa16.55■□□□□ 0.24
MRPL28-201ENST00000199706 MED25Q71SY5 747 aa16.55■□□□□ 0.24
MRPL28-201ENST00000199706 TMPRSS11BQ86T26 416 aa16.55■□□□□ 0.24
MRPL28-201ENST00000199706 AFAP1L2Q8N4X5 818 aa16.55■□□□□ 0.24
MRPL28-201ENST00000199706 AMER3Q8N944 861 aa16.55■□□□□ 0.24
MRPL28-201ENST00000199706 TRPV3Q8NET8 790 aa16.55■□□□□ 0.24
MRPL28-201ENST00000199706 KCTD4Q8WVF5 259 aa16.55■□□□□ 0.24
MRPL28-201ENST00000199706 SLC13A3Q8WWT9 602 aa16.55■□□□□ 0.24
MRPL28-201ENST00000199706 NXNL1Q96CM4 212 aa16.55■□□□□ 0.24
MRPL28-201ENST00000199706 MRRFQ96E11 262 aaKnown RBP16.55■□□□□ 0.24
MRPL28-201ENST00000199706 VPS50Q96JG6 964 aa16.55■□□□□ 0.24
MRPL28-201ENST00000199706 TSNARE1Q96NA8 513 aa16.55■□□□□ 0.24
MRPL28-201ENST00000199706 CD244Q9BZW8 370 aa16.55■□□□□ 0.24
MRPL28-201ENST00000199706 UNKQ9C0B0 810 aaKnown RBP16.55■□□□□ 0.24
MRPL28-201ENST00000199706 CLK4Q9HAZ1 481 aaKnown RBP16.55■□□□□ 0.24
MRPL28-201ENST00000199706 SEMA3GQ9NS98 782 aa16.55■□□□□ 0.24
MRPL28-201ENST00000199706 CTSFQ9UBX1 484 aa16.55■□□□□ 0.24
MRPL28-201ENST00000199706 FEZF1A0PJY2 475 aa16.54■□□□□ 0.24
MRPL28-201ENST00000199706 NCF1BA6NI72 391 aaPredicted RBP16.54■□□□□ 0.24
MRPL28-201ENST00000199706 EIF4E1BA6NMX2 242 aaKnown RBP16.54■□□□□ 0.24
MRPL28-201ENST00000199706 NCF1CA8MVU1 366 aaPredicted RBP16.54■□□□□ 0.24
MRPL28-201ENST00000199706 POC1B-GALNT4F8VUJ3 575 aa16.54■□□□□ 0.24
MRPL28-201ENST00000199706 OR1F1O43749 312 aa16.54■□□□□ 0.24
MRPL28-201ENST00000199706 LCMT2O60294 686 aaKnown RBP16.54■□□□□ 0.24
MRPL28-201ENST00000199706 RBP1P09455 135 aa16.54■□□□□ 0.24
MRPL28-201ENST00000199706 C1GALT1C1LP0DN25 315 aa16.54■□□□□ 0.24
MRPL28-201ENST00000199706 MYBL2P10244 700 aa16.54■□□□□ 0.24
MRPL28-201ENST00000199706 NCF1P14598 390 aaPredicted RBP16.54■□□□□ 0.24
MRPL28-201ENST00000199706 GCAP28676 217 aa16.54■□□□□ 0.24
MRPL28-201ENST00000199706 CASP2P42575 452 aa16.54■□□□□ 0.24
MRPL28-201ENST00000199706 OR1D4P47884 311 aa16.54■□□□□ 0.24
MRPL28-201ENST00000199706 AVPR1BP47901 424 aa16.54■□□□□ 0.24
MRPL28-201ENST00000199706 ALDH18A1P54886 795 aaKnown RBP16.54■□□□□ 0.24
MRPL28-201ENST00000199706 IRF9Q00978 393 aa16.54■□□□□ 0.24
MRPL28-201ENST00000199706 OCA2Q04671 838 aa16.54■□□□□ 0.24
MRPL28-201ENST00000199706 RGS1Q08116 209 aa16.54■□□□□ 0.24
MRPL28-201ENST00000199706 NAA30Q147X3 362 aaPredicted RBP16.54■□□□□ 0.24
MRPL28-201ENST00000199706 SLC9A5Q14940 896 aa16.54■□□□□ 0.24
MRPL28-201ENST00000199706 RASA2Q15283 850 aa16.54■□□□□ 0.24
MRPL28-201ENST00000199706 COL26A1Q96A83 441 aa16.54■□□□□ 0.24
MRPL28-201ENST00000199706 EFCAB11Q9BUY7 163 aa16.54■□□□□ 0.24
MRPL28-201ENST00000199706 ANKZF1Q9H8Y5 726 aa16.54■□□□□ 0.24
MRPL28-201ENST00000199706 PCDHGA9Q9Y5G4 932 aaKnown RBP16.54■□□□□ 0.24
MRPL28-201ENST00000199706 ZNF462Q96JM2 2506 aa16.53■□□□□ 0.24
MRPL28-201ENST00000199706 URADA6NGE7 173 aa16.53■□□□□ 0.24
MRPL28-201ENST00000199706 SUPT3HB4E1H0 165 aa16.53■□□□□ 0.24
MRPL28-201ENST00000199706 TRIM49D1C9J1S8 452 aa16.53■□□□□ 0.24
MRPL28-201ENST00000199706 MAP2K7O14733 419 aa16.53■□□□□ 0.24
MRPL28-201ENST00000199706 NDUFS4O43181 175 aa16.53■□□□□ 0.24
MRPL28-201ENST00000199706 H2AFYO75367 372 aaKnown RBP16.53■□□□□ 0.24
MRPL28-201ENST00000199706 SUPT3HO75486 399 aa16.53■□□□□ 0.24
MRPL28-201ENST00000199706 CEACAM4O75871 244 aa16.53■□□□□ 0.24
MRPL28-201ENST00000199706 SERPINA6P08185 405 aa16.53■□□□□ 0.24
MRPL28-201ENST00000199706 ZGLP1P0C6A0 271 aa16.53■□□□□ 0.24
MRPL28-201ENST00000199706 IL10P22301 178 aa16.53■□□□□ 0.24
MRPL28-201ENST00000199706 HPDP32754 393 aaPredicted RBP16.53■□□□□ 0.24
MRPL28-201ENST00000199706 GDF5P43026 501 aa16.53■□□□□ 0.24
MRPL28-201ENST00000199706 HSPA7P48741 367 aa16.53■□□□□ 0.24
MRPL28-201ENST00000199706 LAPTM5Q13571 262 aa16.53■□□□□ 0.24
MRPL28-201ENST00000199706 LY6DQ14210 128 aa16.53■□□□□ 0.24
MRPL28-201ENST00000199706 SLC29A2Q14542 456 aa16.53■□□□□ 0.24
MRPL28-201ENST00000199706 SETDB1Q15047 1291 aa16.53■□□□□ 0.24
MRPL28-201ENST00000199706 TECRLQ5HYJ1 363 aa16.53■□□□□ 0.24
MRPL28-201ENST00000199706 TMIGD1Q6UXZ0 262 aa16.53■□□□□ 0.24
MRPL28-201ENST00000199706 PPP1R32Q7Z5V6 425 aa16.53■□□□□ 0.24
MRPL28-201ENST00000199706 KRT78Q8N1N4 520 aa16.53■□□□□ 0.24
MRPL28-201ENST00000199706 STT3BQ8TCJ2 826 aa16.53■□□□□ 0.24
MRPL28-201ENST00000199706 ACMSDQ8TDX5 336 aa16.53■□□□□ 0.24
MRPL28-201ENST00000199706 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.53■□□□□ 0.24
MRPL28-201ENST00000199706 PTCD3Q96EY7 689 aaKnown RBP16.53■□□□□ 0.24
MRPL28-201ENST00000199706 FER1L6-AS2Q96M78 137 aa16.53■□□□□ 0.24
MRPL28-201ENST00000199706 CCDC77Q9BR77 488 aa16.53■□□□□ 0.24
MRPL28-201ENST00000199706 SLC6A16Q9GZN6 736 aa16.53■□□□□ 0.24
MRPL28-201ENST00000199706 SLC25A18Q9H1K4 315 aa16.53■□□□□ 0.24
MRPL28-201ENST00000199706 SPNS1Q9H2V7 528 aa16.53■□□□□ 0.24
MRPL28-201ENST00000199706 PSMC3IPQ9P2W1 217 aaPredicted RBP16.53■□□□□ 0.24
MRPL28-201ENST00000199706 PCDHGB7Q9Y5F8 929 aa16.53■□□□□ 0.24
MRPL28-201ENST00000199706 TNPO3Q9Y5L0 923 aaKnown RBP16.53■□□□□ 0.24
MRPL28-201ENST00000199706 IQANK1A0A1B0GTG1 560 aa16.52■□□□□ 0.24
MRPL28-201ENST00000199706 MKRN2OSH3BPM6 223 aa16.52■□□□□ 0.24
MRPL28-201ENST00000199706 K7EPI3 171 aa16.52■□□□□ 0.24
MRPL28-201ENST00000199706 UBXN8O00124 270 aa16.52■□□□□ 0.24
MRPL28-201ENST00000199706 PEX12O00623 359 aa16.52■□□□□ 0.24
MRPL28-201ENST00000199706 CLGNO14967 610 aa16.52■□□□□ 0.24
MRPL28-201ENST00000199706 C1QL1O75973 258 aa16.52■□□□□ 0.24
MRPL28-201ENST00000199706 SLU7O95391 586 aaKnown RBP16.52■□□□□ 0.24
MRPL28-201ENST00000199706 SERPINB1P30740 379 aa16.52■□□□□ 0.24
MRPL28-201ENST00000199706 GMPRP36959 345 aa16.52■□□□□ 0.24
MRPL28-201ENST00000199706 PIK3CGP48736 1102 aa16.52■□□□□ 0.24
MRPL28-201ENST00000199706 SOX8P57073 446 aa16.52■□□□□ 0.24
MRPL28-201ENST00000199706 C18orf21Q32NC0 220 aaPredicted RBP16.52■□□□□ 0.24
MRPL28-201ENST00000199706 PAGE2BQ5JRK9 111 aa16.52■□□□□ 0.24
MRPL28-201ENST00000199706 TCTN3Q6NUS6 607 aa16.52■□□□□ 0.24
MRPL28-201ENST00000199706 ABHD13Q7L211 337 aa16.52■□□□□ 0.24
MRPL28-201ENST00000199706 TDRPQ86YL5 185 aa16.52■□□□□ 0.24
MRPL28-201ENST00000199706 METTL27Q8N6F8 245 aaPredicted RBP16.52■□□□□ 0.24
MRPL28-201ENST00000199706 ANKRD53Q8N9V6 530 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms