RNA–Protein interactions for RNA: ENST00000070846.10

PKP2-201, Transcript of plakophilin 2, humanhuman

TSL 1 (best) BASIC

Gene PKP2, Length 4,241 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-201ENST00000070846 GALNT10Q86SR1 603 aa11.01□□□□□ -0.65
PKP2-201ENST00000070846 TRIM73Q86UV7 250 aa11.01□□□□□ -0.65
PKP2-201ENST00000070846 C12orf40Q86WS4 652 aa11.01□□□□□ -0.65
PKP2-201ENST00000070846 NATD1Q8N6N6 113 aa11.01□□□□□ -0.65
PKP2-201ENST00000070846 ARL10Q8N8L6 244 aa11.01□□□□□ -0.65
PKP2-201ENST00000070846 C19orf18Q8NEA5 215 aa11.01□□□□□ -0.65
PKP2-201ENST00000070846 ATOH1Q92858 354 aaPredicted RBP11.01□□□□□ -0.65
PKP2-201ENST00000070846 PRR11Q96HE9 360 aaPredicted RBP11.01□□□□□ -0.65
PKP2-201ENST00000070846 MKKSQ9NPJ1 570 aaPredicted RBP11.01□□□□□ -0.65
PKP2-201ENST00000070846 PAPOLBQ9NRJ5 636 aaKnown RBP11.01□□□□□ -0.65
PKP2-201ENST00000070846 EFCAB10A6NFE3 127 aa11.01□□□□□ -0.65
PKP2-201ENST00000070846 AURKAO14965 403 aa11.01□□□□□ -0.65
PKP2-201ENST00000070846 GPR39O43194 453 aa11.01□□□□□ -0.65
PKP2-201ENST00000070846 OR5F1O95221 314 aa11.01□□□□□ -0.65
PKP2-201ENST00000070846 IGFBP5P24593 272 aa11.01□□□□□ -0.65
PKP2-201ENST00000070846 HRH2P25021 359 aa11.01□□□□□ -0.65
PKP2-201ENST00000070846 GMPRP36959 345 aa11.01□□□□□ -0.65
PKP2-201ENST00000070846 UFM1P61960 85 aa11.01□□□□□ -0.65
PKP2-201ENST00000070846 DYNC1I2Q13409 638 aaKnown RBP11.01□□□□□ -0.65
PKP2-201ENST00000070846 SNTA1Q13424 505 aa11.01□□□□□ -0.65
PKP2-201ENST00000070846 KCNC3Q14003 757 aa11.01□□□□□ -0.65
PKP2-201ENST00000070846 SCARB2Q14108 478 aa11.01□□□□□ -0.65
PKP2-201ENST00000070846 EIPR1Q53HC9 387 aa11.01□□□□□ -0.65
PKP2-201ENST00000070846 TMEM214Q6NUQ4 689 aaKnown RBP11.01□□□□□ -0.65
PKP2-201ENST00000070846 OAFQ86UD1 273 aa11.01□□□□□ -0.65
PKP2-201ENST00000070846 ROPN1LQ96C74 230 aa11.01□□□□□ -0.65
PKP2-201ENST00000070846 CGREF1Q99674 301 aa11.01□□□□□ -0.65
PKP2-201ENST00000070846 PTGES2Q9H7Z7 377 aa11.01□□□□□ -0.65
PKP2-201ENST00000070846 TBC1D17Q9HA65 648 aa11.01□□□□□ -0.65
PKP2-201ENST00000070846 TPT1P8Q9HAU6 139 aa11.01□□□□□ -0.65
PKP2-201ENST00000070846 NEUROD4Q9HD90 331 aa11.01□□□□□ -0.65
PKP2-201ENST00000070846 PADI2Q9Y2J8 665 aa11.01□□□□□ -0.65
PKP2-201ENST00000070846 TIMP2P16035 220 aa11.01□□□□□ -0.65
PKP2-201ENST00000070846 MAGP20916 626 aa11.01□□□□□ -0.65
PKP2-201ENST00000070846 GANABQ14697 944 aaKnown RBP11.01□□□□□ -0.65
PKP2-201ENST00000070846 ABRAXAS1Q6UWZ7 409 aa11.01□□□□□ -0.65
PKP2-201ENST00000070846 GALNT7Q86SF2 657 aa11.01□□□□□ -0.65
PKP2-201ENST00000070846 ARHGAP12Q8IWW6 846 aa11.01□□□□□ -0.65
PKP2-201ENST00000070846 PIANPQ8IYJ0 282 aa11.01□□□□□ -0.65
PKP2-201ENST00000070846 SDR16C5Q8N3Y7 309 aa11.01□□□□□ -0.65
PKP2-201ENST00000070846 ARFGAP1Q8N6T3 406 aa11.01□□□□□ -0.65
PKP2-201ENST00000070846 LINC01465Q8N7H1 131 aa11.01□□□□□ -0.65
PKP2-201ENST00000070846 OR5AR1Q8NGP9 310 aa11.01□□□□□ -0.65
PKP2-201ENST00000070846 ISG20Q96AZ6 181 aaKnown RBP11.01□□□□□ -0.65
PKP2-201ENST00000070846 EFHD2Q96C19 240 aaPredicted RBP11.01□□□□□ -0.65
PKP2-201ENST00000070846 LRRC3Q9BY71 257 aa11.01□□□□□ -0.65
PKP2-201ENST00000070846 KCNK12Q9HB15 430 aa11.01□□□□□ -0.65
PKP2-201ENST00000070846 TMED5Q9Y3A6 229 aa11.01□□□□□ -0.65
PKP2-201ENST00000070846 FADS3Q9Y5Q0 445 aa11.01□□□□□ -0.65
PKP2-201ENST00000070846 NHSQ6T4R5 1651 aa11.01□□□□□ -0.65
PKP2-201ENST00000070846 ZNF726A6NNF4 738 aa11□□□□□ -0.65
PKP2-201ENST00000070846 ALDOAP04075 364 aaKnown RBP11□□□□□ -0.65
PKP2-201ENST00000070846 FBLP22087 321 aaKnown RBP11□□□□□ -0.65
PKP2-201ENST00000070846 HOXC13P31276 330 aa11□□□□□ -0.65
PKP2-201ENST00000070846 PTDSS1P48651 473 aaKnown RBP11□□□□□ -0.65
PKP2-201ENST00000070846 ARF5P84085 180 aa11□□□□□ -0.65
PKP2-201ENST00000070846 SLAMF1Q13291 335 aa11□□□□□ -0.65
PKP2-201ENST00000070846 ADGRE1Q14246 886 aa11□□□□□ -0.65
PKP2-201ENST00000070846 TRIM25Q14258 630 aaKnown RBP11□□□□□ -0.65
PKP2-201ENST00000070846 NSDHLQ15738 373 aa11□□□□□ -0.65
PKP2-201ENST00000070846 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11□□□□□ -0.65
PKP2-201ENST00000070846 COLEC12Q5KU26 742 aa11□□□□□ -0.65
PKP2-201ENST00000070846 RSPO2Q6UXX9 243 aaPredicted RBP11□□□□□ -0.65
PKP2-201ENST00000070846 GPR65Q8IYL9 337 aa11□□□□□ -0.65
PKP2-201ENST00000070846 OR6K6Q8NGW6 343 aa11□□□□□ -0.65
PKP2-201ENST00000070846 MYDGFQ969H8 173 aa11□□□□□ -0.65
PKP2-201ENST00000070846 GPER1Q99527 375 aa11□□□□□ -0.65
PKP2-201ENST00000070846 PKP4Q99569 1192 aa11□□□□□ -0.65
PKP2-201ENST00000070846 LPAR4Q99677 370 aa11□□□□□ -0.65
PKP2-201ENST00000070846 IFT27Q9BW83 186 aa11□□□□□ -0.65
PKP2-201ENST00000070846 GALNT8Q9NY28 637 aa11□□□□□ -0.65
PKP2-201ENST00000070846 SMCHD1A6NHR9 2005 aa11□□□□□ -0.65
PKP2-201ENST00000070846 TPD52L2O43399 206 aaKnown RBP11□□□□□ -0.65
PKP2-201ENST00000070846 DNAJA2O60884 412 aa11□□□□□ -0.65
PKP2-201ENST00000070846 ZBTB11O95625 1053 aaPredicted RBP11□□□□□ -0.65
PKP2-201ENST00000070846 DLGAP3O95886 979 aa11□□□□□ -0.65
PKP2-201ENST00000070846 AGR2O95994 175 aa11□□□□□ -0.65
PKP2-201ENST00000070846 ZNF823P16415 610 aa11□□□□□ -0.65
PKP2-201ENST00000070846 ITGA3P26006 1051 aa11□□□□□ -0.65
PKP2-201ENST00000070846 CDKN2DP55273 166 aa11□□□□□ -0.65
PKP2-201ENST00000070846 OR4D2P58180 307 aa11□□□□□ -0.65
PKP2-201ENST00000070846 CDK6Q00534 326 aa11□□□□□ -0.65
PKP2-201ENST00000070846 PPP1R8Q12972 351 aaKnown RBP11□□□□□ -0.65
PKP2-201ENST00000070846 TARDBPQ13148 414 aaKnown RBP eCLIP11□□□□□ -0.65
PKP2-201ENST00000070846 PTGR1Q14914 329 aa11□□□□□ -0.65
PKP2-201ENST00000070846 GFOD2Q3B7J2 385 aa11□□□□□ -0.65
PKP2-201ENST00000070846 ARMCX4Q5H9R4 360 aa11□□□□□ -0.65
PKP2-201ENST00000070846 ZNF311Q5JNZ3 666 aa11□□□□□ -0.65
PKP2-201ENST00000070846 ZNF678Q5SXM1 525 aa11□□□□□ -0.65
PKP2-201ENST00000070846 UBAP2Q5T6F2 1119 aaKnown RBP11□□□□□ -0.65
PKP2-201ENST00000070846 SLC2A7Q6PXP3 512 aa11□□□□□ -0.65
PKP2-201ENST00000070846 CEP97Q8IW35 865 aa11□□□□□ -0.65
PKP2-201ENST00000070846 OR4N5Q8IXE1 308 aa11□□□□□ -0.65
PKP2-201ENST00000070846 DAZLQ92904 295 aaKnown RBP11□□□□□ -0.65
PKP2-201ENST00000070846 MOCOSQ96EN8 888 aa11□□□□□ -0.65
PKP2-201ENST00000070846 IRAK3Q9Y616 596 aa11□□□□□ -0.65
PKP2-201ENST00000070846 MAU2Q9Y6X3 613 aa11□□□□□ -0.65
PKP2-201ENST00000070846 COL18A1P39060 1754 aa11□□□□□ -0.65
PKP2-201ENST00000070846 C6orf47O95873 294 aa11□□□□□ -0.65
PKP2-201ENST00000070846 HOXB6P17509 224 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms