RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 CLCN3P51790 818 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 GRSF1Q12849 480 aaKnown RBP eCLIP5.91□□□□□ -1.46
VPS13D-201ENST00000011700 PXKQ7Z7A4 578 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 ZNF676Q8N7Q3 588 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 OR2T33Q8NG76 320 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 TWNKQ96RR1 684 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 TPK1Q9H3S4 243 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 SLC32A1Q9H598 525 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 MRPS30Q9NP92 439 aaKnown RBP5.91□□□□□ -1.46
VPS13D-201ENST00000011700 REXO2Q9Y3B8 237 aaKnown RBP5.91□□□□□ -1.46
VPS13D-201ENST00000011700 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.91□□□□□ -1.462e-6■■■■□ 26.1
VPS13D-201ENST00000011700 GLUD1P00367 558 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 EPHX2P34913 555 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 THBS2P35442 1172 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 WNT3AP56704 352 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 TMEM62Q0P6H9 643 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 DAG1Q14118 895 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 GPR176Q14439 515 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 PROX2Q3B8N5 592 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 SLC39A12Q504Y0 691 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 FAM69AQ5T7M9 428 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 ARHGAP11AQ6P4F7 1023 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 GALNTL5Q7Z4T8 443 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 SLC41A1Q8IVJ1 513 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 KIAA1191Q96A73 305 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 TLCD1Q96CP7 247 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 LRRC58Q96CX6 371 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 NDUFAF4Q9P032 175 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 HCN4Q9Y3Q4 1203 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 WNK3Q9BYP7 1800 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 GPR89AB7ZAQ6 455 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 TP53I11O14683 189 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 GPR89BP0CG08 455 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 ZNF35P13682 527 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 CD36P16671 472 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 GCSHP23434 173 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 EIF2DP41214 584 aaKnown RBP5.91□□□□□ -1.46
VPS13D-201ENST00000011700 ZNF41P51814 821 aaPredicted RBP5.91□□□□□ -1.46
VPS13D-201ENST00000011700 KCNJ2P63252 427 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 SLC14A2Q15849 920 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 NCEH1Q6PIU2 408 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 MON1BQ7L1V2 547 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 RDH10Q8IZV5 341 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 EID2Q8N6I1 236 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 PAPD5Q8NDF8 572 aaKnown RBP5.91□□□□□ -1.46
VPS13D-201ENST00000011700 ARL11Q969Q4 196 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 S100PBPQ96BU1 408 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 OSMRQ99650 979 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 NTPCRQ9BSD7 190 aaKnown RBP5.91□□□□□ -1.46
VPS13D-201ENST00000011700 WDR18Q9BV38 432 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 RTFDC1Q9BY42 306 aaPredicted RBP5.91□□□□□ -1.46
VPS13D-201ENST00000011700 ACOT13Q9NPJ3 140 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 SLC39A1Q9NY26 324 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 KLHL21Q9UJP4 597 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 ADAM18Q9Y3Q7 739 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 NPIPA5A0A0B4J1W7 369 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 SLC22A31A6NKX4 558 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 NT5C1B-RDH14C9J2C7 533 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 PAGE1O75459 146 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 SLC16A8O95907 504 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 CSNK2A2P19784 350 aaPredicted RBP5.91□□□□□ -1.46
VPS13D-201ENST00000011700 CXCR1P25024 350 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 ADORA2AP29274 412 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 THBS3P49746 956 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 SLC25A3Q00325 362 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 RHDQ02161 417 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 PLP2Q04941 152 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 PLA2G4EQ3MJ16 856 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 CRY2Q49AN0 593 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 HECTD2Q5U5R9 776 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 DET1Q7L5Y6 550 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 NANPQ8TBE9 248 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 ARNTL2Q8WYA1 636 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 KCTD12Q96CX2 325 aaKnown RBP5.91□□□□□ -1.46
VPS13D-201ENST00000011700 P2RY11Q96G91 374 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 PCDHB18PQ96TA0 734 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 MCCC2Q9HCC0 563 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 SLC45A1Q9Y2W3 748 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 SLC16A5O15375 505 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 UPP2O95045 317 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 ZBTB48P10074 688 aaPredicted RBP5.91□□□□□ -1.46
VPS13D-201ENST00000011700 GMPRP36959 345 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 BDH1Q02338 343 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 ZNF155Q12901 538 aaPredicted RBP5.91□□□□□ -1.46
VPS13D-201ENST00000011700 GBX1Q14549 363 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 TPRG1LQ5T0D9 272 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 LIPJQ5W064 366 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 FAM183BPQ6ZVS7 135 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 ZNF584Q8IVC4 421 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 SETD7Q8WTS6 366 aaKnown RBP5.91□□□□□ -1.46
VPS13D-201ENST00000011700 NT5DC2Q9H857 520 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 EBF2Q9HAK2 575 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 DDX60LQ5H9U9 1706 aaKnown RBP5.91□□□□□ -1.46
VPS13D-201ENST00000011700 NPIPA5E9PKD4 350 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 FFAR2O15552 330 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 UBL4AP11441 157 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 BDNFP23560 247 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 HTR3AP46098 478 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 PRKXP51817 358 aa5.91□□□□□ -1.46
VPS13D-201ENST00000011700 TRAM2Q15035 370 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms