RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Gadd45aP48316 165 aa16.28■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Cdk10Q3UMM4 360 aa16.28■□□□□ 0.2
Col17a1-201ENSMUST00000026045 GstcdQ5RL51 634 aa16.28■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Krt33bQ61897 404 aa16.28■□□□□ 0.2
Col17a1-201ENSMUST00000026045 CbarpQ66L44 698 aa16.28■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Ubap2lQ80X50 1107 aaKnown RBP16.28■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Nipal3Q8BGN5 410 aa16.28■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Smyd4Q8BTK5 799 aa16.28■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Smad3Q8BUN5 425 aa16.28■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Slc45a3Q8K0H7 553 aa16.28■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Cers2Q924Z4 380 aa16.28■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Asf1aQ9CQE6 204 aa16.28■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Tor3aQ9ER38 385 aa16.28■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Ambra1A2AH22 1300 aa16.28■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Slc9a6A1L3P4 702 aa16.28■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Prrt4B2RU40 902 aa16.28■□□□□ 0.2
Col17a1-201ENSMUST00000026045 MatkP41242 505 aa16.28■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Rnf44Q3UHJ8 407 aa16.28■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Dnajb13Q80Y75 316 aa16.28■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Ptges2Q8BWM0 384 aa16.28■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Med30Q9CQI9 178 aa16.28■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Nt5cQ9JM14 200 aa16.28■□□□□ 0.2
Col17a1-201ENSMUST00000026045 AireQ9Z0E3 552 aa16.28■□□□□ 0.2
Col17a1-201ENSMUST00000026045 HnrnpdlQ9Z130 301 aaKnown RBP16.28■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Prss56F2YMG0 604 aa16.27■□□□□ 0.2
Col17a1-201ENSMUST00000026045 H2-Q1O19441 368 aa16.27■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Taf13P61216 124 aa16.27■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Polr2lP62876 67 aa16.27■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Uba1Q02053 1058 aaKnown RBP16.27■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Khdc4Q3TCX3 612 aa16.27■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Nomo1Q6GQT9 1214 aaKnown RBP16.27■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Uts2bQ765I1 113 aa16.27■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Tas2r129Q7M709 320 aa16.27■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Fmo9Q8C116 539 aa16.27■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Uhrf1Q8VDF2 782 aaKnown RBP16.27■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Olfr345Q8VGK4 311 aa16.27■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Glod5Q9D8I3 148 aa16.27■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Pias4Q9JM05 507 aa16.27■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Mapk9Q9WTU6 423 aa16.27■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Tet3Q8BG87 1668 aa16.27■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Sac3d1A6H687 427 aa16.27■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Gpr137cE9Q343 423 aa16.27■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Gm8104K7N744 198 aa16.27■□□□□ 0.2
Col17a1-201ENSMUST00000026045 PigfO09101 219 aa16.27■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Brd7O88665 651 aaKnown RBP16.27■□□□□ 0.2
Col17a1-201ENSMUST00000026045 MaptP10637 733 aa16.27■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Rplp2P99027 115 aaKnown RBP16.27■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Naa11Q3UX61 218 aa16.27■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Grid2Q61625 1007 aa16.27■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Colec12Q8K4Q8 742 aa16.27■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Cacng4Q9JJV4 327 aa16.27■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Rfc2Q9WUK4 349 aaKnown RBP16.27■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Wscd2D4PHA7 571 aa16.27■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Vmn2r11E9Q4X4 861 aa16.27■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Cyp2a12P56593 492 aa16.27■□□□□ 0.2
Col17a1-201ENSMUST00000026045 UrodP70697 367 aa16.27■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Aldh1a2Q62148 518 aa16.27■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Klhl6Q6V595 619 aa16.27■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Zbtb6Q8K088 423 aa16.27■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Olfr818Q8VG46 318 aa16.27■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Memo1Q91VH6 297 aa16.27■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Pcdha2Q91Y17 948 aa16.27■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Klk6Q91Y82 253 aa16.27■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Trappc5Q9CQA1 188 aa16.27■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Ptges3lQ9D9A7 131 aa16.27■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Ccnl2Q9JJA7 518 aa16.27■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Actr10Q9QZB7 417 aa16.27■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Rpl9-ps1S4R1R7 191 aa16.27■□□□□ 0.2
Col17a1-201ENSMUST00000026045 Myh7bA2AQP0 1941 aa16.27■□□□□ 0.19
Col17a1-201ENSMUST00000026045 Gm6803J3QPI8 144 aa16.27■□□□□ 0.19
Col17a1-201ENSMUST00000026045 Zfp57Q8C6P8 421 aa16.27■□□□□ 0.19
Col17a1-201ENSMUST00000026045 Tprg1Q8CB49 279 aa16.27■□□□□ 0.19
Col17a1-201ENSMUST00000026045 Olfr1484Q8VEU6 315 aa16.27■□□□□ 0.19
Col17a1-201ENSMUST00000026045 MpstQ99J99 297 aa16.27■□□□□ 0.19
Col17a1-201ENSMUST00000026045 Kcnk7Q9Z2T1 307 aa16.27■□□□□ 0.19
Col17a1-201ENSMUST00000026045 AfdnQ9QZQ1 1820 aaKnown RBP16.27■□□□□ 0.19
Col17a1-201ENSMUST00000026045 Art5P70352 309 aa16.27■□□□□ 0.19
Col17a1-201ENSMUST00000026045 Casp7P97864 303 aa16.27■□□□□ 0.19
Col17a1-201ENSMUST00000026045 Cdh12Q5RJH3 794 aa16.27■□□□□ 0.19
Col17a1-201ENSMUST00000026045 Fbxw11Q5SRY7 542 aaKnown RBP16.27■□□□□ 0.19
Col17a1-201ENSMUST00000026045 Q5XFZ0 217 aa16.27■□□□□ 0.19
Col17a1-201ENSMUST00000026045 Cntn2Q61330 1040 aa16.27■□□□□ 0.19
Col17a1-201ENSMUST00000026045 E330021D16RikQ8BW45 371 aa16.27■□□□□ 0.19
Col17a1-201ENSMUST00000026045 Cst14Q8VII3 130 aa16.27■□□□□ 0.19
Col17a1-201ENSMUST00000026045 Wdr55Q9CX97 388 aa16.27■□□□□ 0.19
Col17a1-201ENSMUST00000026045 Lin37Q9D8N6 246 aa16.27■□□□□ 0.19
Col17a1-201ENSMUST00000026045 Ighv11-1A0A075B5R6 117 aa16.26■□□□□ 0.19
Col17a1-201ENSMUST00000026045 Phf11cB4XVP9 339 aa16.26■□□□□ 0.19
Col17a1-201ENSMUST00000026045 Mterf1bB9EJ57 379 aa16.26■□□□□ 0.19
Col17a1-201ENSMUST00000026045 Pgam2O70250 253 aa16.26■□□□□ 0.19
Col17a1-201ENSMUST00000026045 Csf1P07141 552 aa16.26■□□□□ 0.19
Col17a1-201ENSMUST00000026045 Gabrr2P56476 465 aa16.26■□□□□ 0.19
Col17a1-201ENSMUST00000026045 Snrpd1P62315 119 aaKnown RBP16.26■□□□□ 0.19
Col17a1-201ENSMUST00000026045 SobpQ0P5V2 864 aa16.26■□□□□ 0.19
Col17a1-201ENSMUST00000026045 Dennd1bQ3U1T9 766 aa16.26■□□□□ 0.19
Col17a1-201ENSMUST00000026045 Gm648Q3UJ22 213 aa16.26■□□□□ 0.19
Col17a1-201ENSMUST00000026045 GapdhsQ64467 440 aa16.26■□□□□ 0.19
Col17a1-201ENSMUST00000026045 Olfr1106Q7TR57 312 aa16.26■□□□□ 0.19
Col17a1-201ENSMUST00000026045 Mterf1aQ8CHZ9 379 aa16.26■□□□□ 0.19
Col17a1-201ENSMUST00000026045 Uroc1Q8VC12 676 aa16.26■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 33.7 ms