RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 SH2D4BQ5SQS7 431 aa11.79□□□□□ -0.52
LINC00339-213ENST00000642137 MANEAQ5SRI9 462 aa11.79□□□□□ -0.52
LINC00339-213ENST00000642137 TTC19Q6DKK2 380 aaPredicted RBP11.79□□□□□ -0.52
LINC00339-213ENST00000642137 RNF165Q6ZSG1 346 aa11.79□□□□□ -0.52
LINC00339-213ENST00000642137 MTERF4Q7Z6M4 381 aaKnown RBP11.79□□□□□ -0.52
LINC00339-213ENST00000642137 B3GNT8Q7Z7M8 397 aa11.79□□□□□ -0.52
LINC00339-213ENST00000642137 BPHLQ86WA6 291 aaPredicted RBP11.79□□□□□ -0.52
LINC00339-213ENST00000642137 TMPRSS12Q86WS5 348 aa11.79□□□□□ -0.52
LINC00339-213ENST00000642137 MYLK4Q86YV6 388 aaPredicted RBP11.79□□□□□ -0.52
LINC00339-213ENST00000642137 CRLF3Q8IUI8 442 aa11.79□□□□□ -0.52
LINC00339-213ENST00000642137 MCATQ8IVS2 390 aaKnown RBP11.79□□□□□ -0.52
LINC00339-213ENST00000642137 CDYL2Q8N8U2 506 aa11.79□□□□□ -0.52
LINC00339-213ENST00000642137 DCBLD1Q8N8Z6 715 aa11.79□□□□□ -0.52
LINC00339-213ENST00000642137 AGBL5Q8NDL9 886 aa11.79□□□□□ -0.52
LINC00339-213ENST00000642137 RCBTB1Q8NDN9 531 aa11.79□□□□□ -0.52
LINC00339-213ENST00000642137 TRPV3Q8NET8 790 aa11.79□□□□□ -0.52
LINC00339-213ENST00000642137 OR7G3Q8NG95 312 aa11.79□□□□□ -0.52
LINC00339-213ENST00000642137 WDR20Q8TBZ3 569 aa11.79□□□□□ -0.52
LINC00339-213ENST00000642137 ADAMTS14Q8WXS8 1223 aa11.79□□□□□ -0.52
LINC00339-213ENST00000642137 TM4SF19Q96DZ7 209 aa11.79□□□□□ -0.52
LINC00339-213ENST00000642137 STRADBQ9C0K7 418 aa11.79□□□□□ -0.52
LINC00339-213ENST00000642137 TNFRSF12AQ9NP84 129 aa11.79□□□□□ -0.52
LINC00339-213ENST00000642137 ENAMQ9NRM1 1142 aa11.79□□□□□ -0.52
LINC00339-213ENST00000642137 SOHLH2Q9NX45 425 aa11.79□□□□□ -0.52
LINC00339-213ENST00000642137 AKAP7Q9P0M2 348 aaPredicted RBP11.79□□□□□ -0.52
LINC00339-213ENST00000642137 ZFP69BQ9UJL9 534 aa11.79□□□□□ -0.52
LINC00339-213ENST00000642137 CLCA2Q9UQC9 943 aa11.79□□□□□ -0.52
LINC00339-213ENST00000642137 TIMM22Q9Y584 194 aa11.79□□□□□ -0.52
LINC00339-213ENST00000642137 PCDHGA4Q9Y5G9 962 aa11.79□□□□□ -0.52
LINC00339-213ENST00000642137 AP1M2Q9Y6Q5 423 aa11.79□□□□□ -0.52
LINC00339-213ENST00000642137 TCP11X1B4DZS4 312 aa11.78□□□□□ -0.52
LINC00339-213ENST00000642137 SLCO1B7G3V0H7 640 aa11.78□□□□□ -0.52
LINC00339-213ENST00000642137 FOXE1O00358 373 aaPredicted RBP11.78□□□□□ -0.52
LINC00339-213ENST00000642137 MANBAO00462 879 aa11.78□□□□□ -0.52
LINC00339-213ENST00000642137 TXNDC9O14530 226 aa11.78□□□□□ -0.52
LINC00339-213ENST00000642137 NRP2O60462 931 aa11.78□□□□□ -0.52
LINC00339-213ENST00000642137 ULK1O75385 1050 aa11.78□□□□□ -0.52
LINC00339-213ENST00000642137 CSO75390 466 aaKnown RBP11.78□□□□□ -0.52
LINC00339-213ENST00000642137 CRCPO75575 148 aa11.78□□□□□ -0.52
LINC00339-213ENST00000642137 CLEC3AO75596 197 aa11.78□□□□□ -0.52
LINC00339-213ENST00000642137 CHEK2O96017 543 aa11.78□□□□□ -0.52
LINC00339-213ENST00000642137 FOLR1P15328 257 aa11.78□□□□□ -0.52
LINC00339-213ENST00000642137 BCL6P41182 706 aa11.78□□□□□ -0.52
LINC00339-213ENST00000642137 HK2P52789 917 aa11.78□□□□□ -0.52
LINC00339-213ENST00000642137 GYS2P54840 703 aa11.78□□□□□ -0.52
LINC00339-213ENST00000642137 FOXA1P55317 472 aa11.78□□□□□ -0.52
LINC00339-213ENST00000642137 IFT88Q13099 833 aa11.78□□□□□ -0.52
LINC00339-213ENST00000642137 PWP1Q13610 501 aa11.78□□□□□ -0.52
LINC00339-213ENST00000642137 TCTE1Q5JU00 501 aa11.78□□□□□ -0.52
LINC00339-213ENST00000642137 HES3Q5TGS1 186 aa11.78□□□□□ -0.52
LINC00339-213ENST00000642137 KANK2Q63ZY3 851 aa11.78□□□□□ -0.52
LINC00339-213ENST00000642137 FRG2Q64ET8 278 aa11.78□□□□□ -0.52
LINC00339-213ENST00000642137 CYB5D1Q6P9G0 228 aa11.78□□□□□ -0.52
LINC00339-213ENST00000642137 PLD3Q8IV08 490 aa11.78□□□□□ -0.52
LINC00339-213ENST00000642137 AFAP1L2Q8N4X5 818 aa11.78□□□□□ -0.52
LINC00339-213ENST00000642137 ZNF781Q8N8C0 355 aa11.78□□□□□ -0.52
LINC00339-213ENST00000642137 ANKRD53Q8N9V6 530 aa11.78□□□□□ -0.52
LINC00339-213ENST00000642137 PIWIL2Q8TC59 973 aaKnown RBP11.78□□□□□ -0.52
LINC00339-213ENST00000642137 ZNF473Q8WTR7 871 aaKnown RBP11.78□□□□□ -0.52
LINC00339-213ENST00000642137 SELENOMQ8WWX9 145 aa11.78□□□□□ -0.52
LINC00339-213ENST00000642137 USP7Q93009 1102 aa11.78□□□□□ -0.52
LINC00339-213ENST00000642137 LIN37Q96GY3 246 aaPredicted RBP11.78□□□□□ -0.52
LINC00339-213ENST00000642137 FAR2Q96K12 515 aa11.78□□□□□ -0.52
LINC00339-213ENST00000642137 ZNF285Q96NJ3 590 aa11.78□□□□□ -0.52
LINC00339-213ENST00000642137 FRG2BQ96QU4 278 aa11.78□□□□□ -0.52
LINC00339-213ENST00000642137 CMKLR1Q99788 373 aa11.78□□□□□ -0.52
LINC00339-213ENST00000642137 ELOVL6Q9H5J4 265 aa11.78□□□□□ -0.52
LINC00339-213ENST00000642137 PNPOQ9NVS9 261 aa11.78□□□□□ -0.52
LINC00339-213ENST00000642137 SERTAD3Q9UJW9 196 aa11.78□□□□□ -0.52
LINC00339-213ENST00000642137 PPT2Q9UMR5 302 aa11.78□□□□□ -0.52
LINC00339-213ENST00000642137 LOC105369274A0A096LPK9 316 aa11.77□□□□□ -0.53
LINC00339-213ENST00000642137 LOC102723532A0A0G2JNH3 316 aa11.77□□□□□ -0.53
LINC00339-213ENST00000642137 DCDC2BA2VCK2 349 aa11.77□□□□□ -0.53
LINC00339-213ENST00000642137 H0YGG7 62 aa11.77□□□□□ -0.53
LINC00339-213ENST00000642137 FFAR3O14843 346 aa11.77□□□□□ -0.53
LINC00339-213ENST00000642137 GPR42O15529 346 aa11.77□□□□□ -0.53
LINC00339-213ENST00000642137 HCRTR1O43613 425 aa11.77□□□□□ -0.53
LINC00339-213ENST00000642137 EDF1O60869 148 aaKnown RBP11.77□□□□□ -0.53
LINC00339-213ENST00000642137 PDYNP01213 254 aa11.77□□□□□ -0.53
LINC00339-213ENST00000642137 SERPINA6P08185 405 aa11.77□□□□□ -0.53
LINC00339-213ENST00000642137 PCNAP12004 261 aa11.77□□□□□ -0.53
LINC00339-213ENST00000642137 HSD3B1P14060 373 aa11.77□□□□□ -0.53
LINC00339-213ENST00000642137 HSD3B2P26439 372 aa11.77□□□□□ -0.53
LINC00339-213ENST00000642137 SERPINB3P29508 390 aa11.77□□□□□ -0.53
LINC00339-213ENST00000642137 ARF3P61204 181 aaPredicted RBP11.77□□□□□ -0.53
LINC00339-213ENST00000642137 PHEXP78562 749 aa11.77□□□□□ -0.53
LINC00339-213ENST00000642137 MC2RQ01718 297 aa11.77□□□□□ -0.53
LINC00339-213ENST00000642137 EIF3IQ13347 325 aaKnown RBP11.77□□□□□ -0.53
LINC00339-213ENST00000642137 PUM1Q14671 1186 aaKnown RBP eCLIP11.77□□□□□ -0.53
LINC00339-213ENST00000642137 C16orf72Q14CZ0 275 aa11.77□□□□□ -0.53
LINC00339-213ENST00000642137 CLEC6AQ6EIG7 209 aa11.77□□□□□ -0.53
LINC00339-213ENST00000642137 FRMPD2BQ6IN97 320 aa11.77□□□□□ -0.53
LINC00339-213ENST00000642137 VN1R4Q7Z5H5 301 aa11.77□□□□□ -0.53
LINC00339-213ENST00000642137 ASPGQ86U10 573 aa11.77□□□□□ -0.53
LINC00339-213ENST00000642137 OR4N4Q8N0Y3 316 aa11.77□□□□□ -0.53
LINC00339-213ENST00000642137 GALNT15Q8N3T1 639 aa11.77□□□□□ -0.53
LINC00339-213ENST00000642137 ZNF655Q8N720 491 aaPredicted RBP11.77□□□□□ -0.53
LINC00339-213ENST00000642137 CAMKVQ8NCB2 501 aa11.77□□□□□ -0.53
LINC00339-213ENST00000642137 OR8K5Q8NH50 307 aa11.77□□□□□ -0.53
LINC00339-213ENST00000642137 HUS1BQ8NHY5 278 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms