RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 SPPL2AQ8TCT8 520 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 CSGALNACT1Q8TDX6 532 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 SOCS4Q8WXH5 440 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 FRG2BQ96QU4 278 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 NEK6Q9HC98 313 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 PLCXD1Q9NUJ7 323 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 CCDC59Q9P031 241 aaKnown RBP10.55□□□□□ -0.72
SNIP1-204ENST00000638725 SPATA7Q9P0W8 599 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 FZD4Q9ULV1 537 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 PCDHGB6Q9Y5F9 930 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 PCDHGB3Q9Y5G1 929 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 LYVE1Q9Y5Y7 322 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 A3GALT2U3KPV4 340 aa10.55□□□□□ -0.72
SNIP1-204ENST00000638725 TNFRSF11BO00300 401 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 SUV39H1O43463 412 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 MED26O95402 600 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 COPZ1P61923 177 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 AP1S1P61966 158 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 SRSF11Q05519 484 aaKnown RBP10.54□□□□□ -0.72
SNIP1-204ENST00000638725 HSPA14Q0VDF9 509 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 DDX39BQ13838 428 aaKnown RBP10.54□□□□□ -0.72
SNIP1-204ENST00000638725 FAM26DQ5JW98 314 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 RSBN1Q5VWQ0 802 aaPredicted RBP10.54□□□□□ -0.72
SNIP1-204ENST00000638725 FUT10Q6P4F1 479 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 CCDC80Q76M96 950 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 OR52J3Q8NH60 311 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 BBS2Q9BXC9 721 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 ATG10Q9H0Y0 220 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 NMRK2Q9NPI5 230 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 FKBP14Q9NWM8 211 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 FBXL12Q9NXK8 326 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 ZNF226Q9NYT6 803 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 MBD1Q9UIS9 605 aaPredicted RBP10.54□□□□□ -0.72
SNIP1-204ENST00000638725 SCN8AQ9UQD0 1980 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 C2orf78A6NCI8 922 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 SH3BGRLO75368 114 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 RPL17P18621 184 aaKnown RBP10.54□□□□□ -0.72
SNIP1-204ENST00000638725 CASP9P55211 416 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 B4GALNT1Q00973 533 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 BCL2L1Q07817 233 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 ABRQ12979 859 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 CHIT1Q13231 466 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 PPIGQ13427 754 aaKnown RBP eCLIP10.54□□□□□ -0.72
SNIP1-204ENST00000638725 TP53BP2Q13625 1128 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 VEZF1Q14119 521 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 TMEM173Q86WV6 379 aaPredicted RBP10.54□□□□□ -0.72
SNIP1-204ENST00000638725 VRK3Q8IV63 474 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 CPA6Q8N4T0 437 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 OR10G2Q8NGC3 310 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 UTP15Q8TED0 518 aaKnown RBP10.54□□□□□ -0.72
SNIP1-204ENST00000638725 NIPSNAP1Q9BPW8 284 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 ROGDIQ9GZN7 287 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 RMI1Q9H9A7 625 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 FAM120CQ9NX05 1096 aaKnown RBP10.54□□□□□ -0.72
SNIP1-204ENST00000638725 ADPRHL2Q9NX46 363 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 EHD3Q9NZN3 535 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 SLC6A14Q9UN76 642 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 PCDHB11Q9Y5F2 797 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 NOX1Q9Y5S8 564 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 A0A1W2PQ67 120 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 GCM2O75603 506 aaPredicted RBP10.54□□□□□ -0.72
SNIP1-204ENST00000638725 CCNKO75909 580 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 ACPPP15309 386 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 PTPN2P17706 415 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 NSG1P42857 185 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 SLC6A12P48065 614 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 SLC11A1P49279 550 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 RGS6P49758 472 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 UGT2B15P54855 530 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 ST3GAL4Q11206 333 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 GAB1Q13480 694 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 C10orf62Q5T681 223 aaPredicted RBP10.54□□□□□ -0.72
SNIP1-204ENST00000638725 LYPLAL1Q5VWZ2 237 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 C17orf99Q6UX52 265 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 RFLNAQ6ZTI6 216 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 TPGS1Q6ZTW0 290 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 ZNF605Q86T29 641 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 MMAAQ8IVH4 418 aaKnown RBP10.54□□□□□ -0.72
SNIP1-204ENST00000638725 CYP4Z2PQ8N1L4 340 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 IL17RDQ8NFM7 739 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 COL21A1Q96P44 957 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 MTERF1Q99551 399 aaKnown RBP10.54□□□□□ -0.72
SNIP1-204ENST00000638725 NUAK2Q9H093 628 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 CHST8Q9H2A9 424 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 MARCH7Q9H992 704 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 MOV10Q9HCE1 1003 aaKnown RBP10.54□□□□□ -0.72
SNIP1-204ENST00000638725 C14orf119Q9NWQ9 140 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 NDUFAF4Q9P032 175 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 PCDHGA2Q9Y5H1 932 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 OR51B4Q9Y5P0 310 aa10.54□□□□□ -0.72
SNIP1-204ENST00000638725 MN1Q10571 1320 aaPredicted RBP10.53□□□□□ -0.72
SNIP1-204ENST00000638725 NPIPB8E9PQR5 432 aa10.53□□□□□ -0.72
SNIP1-204ENST00000638725 DPM1O60762 260 aa10.53□□□□□ -0.72
SNIP1-204ENST00000638725 AOC2O75106 756 aa10.53□□□□□ -0.72
SNIP1-204ENST00000638725 CELF2O95319 508 aaKnown RBP10.53□□□□□ -0.72
SNIP1-204ENST00000638725 HIST1H2AGP0C0S8 130 aaPredicted RBP10.53□□□□□ -0.72
SNIP1-204ENST00000638725 CBSLP0DN79 551 aa10.53□□□□□ -0.72
SNIP1-204ENST00000638725 CKBP12277 381 aa10.53□□□□□ -0.72
SNIP1-204ENST00000638725 CD22P20273 847 aa10.53□□□□□ -0.72
SNIP1-204ENST00000638725 HIST1H2ADP20671 130 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms