RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 SLC11A1P49279 550 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 NLRP11P59045 1033 aaKnown RBP2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 PLIN5Q00G26 463 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 LTBQ06643 244 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 FOXM1Q08050 763 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 TRDNQ13061 729 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 HTR4Q13639 388 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 CTTNQ14247 550 aaKnown RBP2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 GPR18Q14330 331 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 KRT33BQ14525 404 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 EFNB3Q15768 340 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 SYT16Q17RD7 645 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 ATP13A5Q4VNC0 1218 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 FAM98BQ52LJ0 330 aaKnown RBP2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 MANEAQ5SRI9 462 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 NSUN5P2Q63ZY6 315 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 TMEM211Q6ICI0 200 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 DUS1LQ6P1R4 473 aaKnown RBP2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 TEX38Q6PEX7 206 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 PAPD4Q6PIY7 484 aaKnown RBP2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 MOXD1Q6UVY6 613 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 SUSD1Q6UWL2 747 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 Q6ZSV7 163 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 ANO5Q75V66 913 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 ZNF410Q86VK4 478 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 NRROSQ86YC3 692 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 FOXRED2Q8IWF2 684 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 DSELQ8IZU8 1212 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 BEST3Q8N1M1 668 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 RASGEF1CQ8N431 466 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 SLC38A9Q8NBW4 561 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 CAMKVQ8NCB2 501 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 RDM1Q8NG50 284 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 TEKT4Q8WW24 435 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 PIBF1Q8WXW3 757 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 SECISBP2LQ93073 1101 aaKnown RBP2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 TAAR8Q969N4 342 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 SPACA9Q96E40 222 aaPredicted RBP2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 GRAMD2BQ96HH9 432 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 RPGRIP1Q96KN7 1286 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 APOLD1Q96LR9 279 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 LRRC3BQ96PB8 259 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 SMC6Q96SB8 1091 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 DDOQ99489 341 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 RIT2Q99578 217 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 GFI1Q99684 422 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 CITED2Q99967 270 aaPredicted RBP2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 DESI2Q9BSY9 194 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 THUMPD3Q9BV44 507 aaKnown RBP2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 MRPL9Q9BYD2 267 aaKnown RBP2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 LRRC2Q9BYS8 371 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 GLT8D2Q9H1C3 349 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 C2orf40Q9H1Z8 148 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 RWDD1Q9H446 243 aaPredicted RBP2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 GOLPH3LQ9H4A5 285 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 DHX33Q9H6R0 707 aaKnown RBP2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 AZI2Q9H6S1 392 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 NOL11Q9H8H0 719 aaKnown RBP2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 C17orf75Q9HAS0 396 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 SEBOXQ9HB31 216 aaPredicted RBP2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 CHMP1AQ9HD42 196 aaPredicted RBP2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 KCNMB3Q9NPA1 279 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 KRCC1Q9NPI7 259 aaPredicted RBP2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 CNGB3Q9NQW8 809 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 ZNF302Q9NR11 478 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 PRMT8Q9NR22 394 aaPredicted RBP2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 RBM28Q9NW13 759 aaKnown RBP2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 TAS2R14Q9NYV8 317 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 SPG21Q9NZD8 308 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 WRAP73Q9P2S5 460 aaPredicted RBP2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 PAM16Q9Y3D7 125 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 PCDHGA5Q9Y5G8 931 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 LIPGQ9Y5X9 500 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 SPAG17Q6Q759 2223 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 CLUHO75153 1309 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 ATXN2Q99700 1313 aaKnown RBP2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 CITO14578 2027 aa2.39□□□□□ -2.03
SMARCB1-208ENST00000634926 PTPRDP23468 1912 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 HELZP42694 1942 aaKnown RBP2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 GOLGA6L9A6NEM1 432 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 SMCO2A6NFE2 343 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 FAM90A26D6RGX4 464 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 PTGESO14684 152 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 TIMM23O14925 209 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 ANKRD28O15084 1053 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 MAGEB2O15479 319 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 TEX28O15482 410 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 ASAP2O43150 1006 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 ZBTB43O43298 467 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 SLC37A4O43826 429 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 TSPAN1O60635 241 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 SOCS5O75159 536 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 ZNF217O75362 1048 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 DDHD2O94830 711 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 SLCO2B1O94956 709 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 KCNK5O95279 499 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 SLU7O95391 586 aaKnown RBP2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 TGDSO95455 350 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 TDP2O95551 362 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 ATP5BP06576 529 aaKnown RBP2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms