RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 TMUB1Q9BVT8 246 aa18.97■□□□□ 0.63
TARDBP-228ENST00000629725 CHRAC1Q9NRG0 131 aa18.97■□□□□ 0.63
TARDBP-228ENST00000629725 ARHGEF33A8MVX0 844 aa18.96■□□□□ 0.63
TARDBP-228ENST00000629725 MYO1CO00159 1063 aa18.96■□□□□ 0.63
TARDBP-228ENST00000629725 HAT1O14929 419 aa18.96■□□□□ 0.63
TARDBP-228ENST00000629725 PNLIPRP1P54315 467 aa18.96■□□□□ 0.63
TARDBP-228ENST00000629725 SNRPNP63162 240 aaKnown RBP18.96■□□□□ 0.63
TARDBP-228ENST00000629725 PRSS41Q7RTY9 318 aa18.96■□□□□ 0.63
TARDBP-228ENST00000629725 FGD2Q7Z6J4 655 aa18.96■□□□□ 0.63
TARDBP-228ENST00000629725 TMEM200AQ86VY9 491 aa18.96■□□□□ 0.63
TARDBP-228ENST00000629725 SHISA5Q8N114 240 aa18.96■□□□□ 0.63
TARDBP-228ENST00000629725 MPP5Q8N3R9 675 aa18.96■□□□□ 0.63
TARDBP-228ENST00000629725 CPSF7Q8N684 471 aaKnown RBP18.96■□□□□ 0.63
TARDBP-228ENST00000629725 SLC35B2Q8TB61 432 aa18.96■□□□□ 0.63
TARDBP-228ENST00000629725 ZNF839A8K0R7 811 aa18.95■□□□□ 0.62
TARDBP-228ENST00000629725 SLC25A12O75746 678 aa18.95■□□□□ 0.62
TARDBP-228ENST00000629725 ATP5DP30049 168 aa18.95■□□□□ 0.62
TARDBP-228ENST00000629725 HSD17B2P37059 387 aa18.95■□□□□ 0.62
TARDBP-228ENST00000629725 FDFT1P37268 417 aa18.95■□□□□ 0.62
TARDBP-228ENST00000629725 TAS2R50P59544 299 aa18.95■□□□□ 0.62
TARDBP-228ENST00000629725 KLF1Q13351 362 aaPredicted RBP18.95■□□□□ 0.62
TARDBP-228ENST00000629725 GBX1Q14549 363 aa18.95■□□□□ 0.62
TARDBP-228ENST00000629725 RNFT1Q5M7Z0 435 aa18.95■□□□□ 0.62
TARDBP-228ENST00000629725 CTSL3PQ5NE16 218 aa18.95■□□□□ 0.62
TARDBP-228ENST00000629725 PAPD4Q6PIY7 484 aaKnown RBP18.95■□□□□ 0.62
TARDBP-228ENST00000629725 CEP128Q6ZU80 1094 aa18.95■□□□□ 0.62
TARDBP-228ENST00000629725 PLD3Q8IV08 490 aa18.95■□□□□ 0.62
TARDBP-228ENST00000629725 CCDC170Q8IYT3 715 aa18.95■□□□□ 0.62
TARDBP-228ENST00000629725 PPFIBP2Q8ND30 876 aa18.95■□□□□ 0.62
TARDBP-228ENST00000629725 OLFM1Q99784 485 aa18.95■□□□□ 0.62
TARDBP-228ENST00000629725 EBNA1BP2Q99848 306 aaKnown RBP18.95■□□□□ 0.62
TARDBP-228ENST00000629725 CDCP1Q9H5V8 836 aa18.95■□□□□ 0.62
TARDBP-228ENST00000629725 FAM114A2Q9NRY5 505 aa18.95■□□□□ 0.62
TARDBP-228ENST00000629725 ABCF3Q9NUQ8 709 aa18.95■□□□□ 0.62
TARDBP-228ENST00000629725 HCN3Q9P1Z3 774 aa18.95■□□□□ 0.62
TARDBP-228ENST00000629725 ABCA2Q9BZC7 2435 aa18.94■□□□□ 0.62
TARDBP-228ENST00000629725 CDK2AP1O14519 115 aa18.94■□□□□ 0.62
TARDBP-228ENST00000629725 NME2P1O60361 137 aa18.94■□□□□ 0.62
TARDBP-228ENST00000629725 PSIP1O75475 530 aaKnown RBP18.94■□□□□ 0.62
TARDBP-228ENST00000629725 STATHP02808 62 aa18.94■□□□□ 0.62
TARDBP-228ENST00000629725 NME2P22392 152 aa18.94■□□□□ 0.62
TARDBP-228ENST00000629725 DNAJA1P31689 397 aaKnown RBP18.94■□□□□ 0.62
TARDBP-228ENST00000629725 STIP1P31948 543 aaKnown RBP18.94■□□□□ 0.62
TARDBP-228ENST00000629725 PTGER1P34995 402 aa18.94■□□□□ 0.62
TARDBP-228ENST00000629725 PTGS2P35354 604 aa18.94■□□□□ 0.62
TARDBP-228ENST00000629725 ABATP80404 500 aa18.94■□□□□ 0.62
TARDBP-228ENST00000629725 ACTN3Q08043 901 aaPredicted RBP18.94■□□□□ 0.62
TARDBP-228ENST00000629725 SFT2D3Q587I9 215 aa18.94■□□□□ 0.62
TARDBP-228ENST00000629725 LGI4Q8N135 537 aa18.94■□□□□ 0.62
TARDBP-228ENST00000629725 FAM57AQ8TBR7 257 aa18.94■□□□□ 0.62
TARDBP-228ENST00000629725 ASB5Q8WWX0 329 aa18.94■□□□□ 0.62
TARDBP-228ENST00000629725 FAM136AQ96C01 138 aa18.94■□□□□ 0.62
TARDBP-228ENST00000629725 BIRC8Q96P09 236 aa18.94■□□□□ 0.62
TARDBP-228ENST00000629725 PKP4Q99569 1192 aa18.94■□□□□ 0.62
TARDBP-228ENST00000629725 LPAR4Q99677 370 aa18.94■□□□□ 0.62
TARDBP-228ENST00000629725 ZNF559Q9BR84 538 aa18.94■□□□□ 0.62
TARDBP-228ENST00000629725 NPDC1Q9NQX5 325 aaPredicted RBP18.94■□□□□ 0.62
TARDBP-228ENST00000629725 DUSP10Q9Y6W6 482 aa18.94■□□□□ 0.62
TARDBP-228ENST00000629725 FAM221AA4D161 298 aa18.93■□□□□ 0.62
TARDBP-228ENST00000629725 NKX2-6A6NCS4 301 aa18.93■□□□□ 0.62
TARDBP-228ENST00000629725 NDC80O14777 642 aa18.93■□□□□ 0.62
TARDBP-228ENST00000629725 NIPSNAP2O75323 286 aa18.93■□□□□ 0.62
TARDBP-228ENST00000629725 SLC16A8O95907 504 aa18.93■□□□□ 0.62
TARDBP-228ENST00000629725 CATP04040 527 aaKnown RBP18.93■□□□□ 0.62
TARDBP-228ENST00000629725 TPOP07202 933 aa18.93■□□□□ 0.62
TARDBP-228ENST00000629725 IL1RNP18510 177 aa18.93■□□□□ 0.62
TARDBP-228ENST00000629725 FMO4P31512 558 aa18.93■□□□□ 0.62
TARDBP-228ENST00000629725 BCL6P41182 706 aa18.93■□□□□ 0.62
TARDBP-228ENST00000629725 TFF3Q07654 80 aa18.93■□□□□ 0.62
TARDBP-228ENST00000629725 TBX2Q13207 712 aaPredicted RBP18.93■□□□□ 0.62
TARDBP-228ENST00000629725 ABRAXAS2Q15018 415 aa18.93■□□□□ 0.62
TARDBP-228ENST00000629725 NSDHLQ15738 373 aa18.93■□□□□ 0.62
TARDBP-228ENST00000629725 KLHL38Q2WGJ6 581 aa18.93■□□□□ 0.62
TARDBP-228ENST00000629725 PCID2Q5JVF3 399 aa18.93■□□□□ 0.62
TARDBP-228ENST00000629725 ZNF468Q5VIY5 522 aaPredicted RBP18.93■□□□□ 0.62
TARDBP-228ENST00000629725 CES4AQ5XG92 561 aa18.93■□□□□ 0.62
TARDBP-228ENST00000629725 TMEM211Q6ICI0 200 aa18.93■□□□□ 0.62
TARDBP-228ENST00000629725 PCGF5Q86SE9 256 aa18.93■□□□□ 0.62
TARDBP-228ENST00000629725 CD163Q86VB7 1156 aa18.93■□□□□ 0.62
TARDBP-228ENST00000629725 DMRTC2Q8IXT2 367 aaPredicted RBP18.93■□□□□ 0.62
TARDBP-228ENST00000629725 MMP21Q8N119 569 aa18.93■□□□□ 0.62
TARDBP-228ENST00000629725 OTUD6BQ8N6M0 293 aa18.93■□□□□ 0.62
TARDBP-228ENST00000629725 LILRB4Q8NHJ6 448 aa18.93■□□□□ 0.62
TARDBP-228ENST00000629725 PRRC2AP48634 2157 aaKnown RBP18.92■□□□□ 0.62
TARDBP-228ENST00000629725 A0A1B0GTH9 108 aa18.92■□□□□ 0.62
TARDBP-228ENST00000629725 E7ENX8 843 aa18.92■□□□□ 0.62
TARDBP-228ENST00000629725 H7BY64 318 aa18.92■□□□□ 0.62
TARDBP-228ENST00000629725 SGK494L7N484 410 aa18.92■□□□□ 0.62
TARDBP-228ENST00000629725 SMAPO00193 183 aa18.92■□□□□ 0.62
TARDBP-228ENST00000629725 IFNB1P01574 187 aa18.92■□□□□ 0.62
TARDBP-228ENST00000629725 APRTP07741 180 aa18.92■□□□□ 0.62
TARDBP-228ENST00000629725 CHRM3P20309 590 aa18.92■□□□□ 0.62
TARDBP-228ENST00000629725 PTMSP20962 102 aa18.92■□□□□ 0.62
TARDBP-228ENST00000629725 MSX1P28360 303 aa18.92■□□□□ 0.62
TARDBP-228ENST00000629725 CHRNB4P30926 498 aa18.92■□□□□ 0.62
TARDBP-228ENST00000629725 CYLC1P35663 651 aaPredicted RBP18.92■□□□□ 0.62
TARDBP-228ENST00000629725 CYB561P49447 251 aa18.92■□□□□ 0.62
TARDBP-228ENST00000629725 IST1P53990 364 aa18.92■□□□□ 0.62
TARDBP-228ENST00000629725 TAP2Q03519 686 aa18.92■□□□□ 0.62
TARDBP-228ENST00000629725 USP10Q14694 798 aaKnown RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms