RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 REEP4Q9H6H4 257 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 SERHLQ9NQF3 203 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 AGPAT4Q9NRZ5 378 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 ZNF282Q9UDV7 671 aaPredicted RBP15.73■□□□□ 0.11
LDB3-208ENST00000623007 ADAM29Q9UKF5 820 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 SUFUQ9UMX1 484 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 AURKCQ9UQB9 309 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 DMTF1Q9Y222 760 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 PRKAB1Q9Y478 270 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 PCDHB14Q9Y5E9 798 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 TCRBV5S2A0A599 114 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 PRSS38A1L453 326 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 KRT87PA6NCN2 255 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 PRR23AA6NEV1 266 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 DFNA5O60443 496 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 RAP2AP10114 183 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 SRFP11831 508 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 IGFBP4P22692 258 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 TACR1P25103 407 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 OXTRP30559 389 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 REEP5Q00765 189 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 LRRC36Q1X8D7 754 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 TMTC4Q5T4D3 741 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 KIAA1324Q6UXG2 1013 aaKnown RBP15.73■□□□□ 0.11
LDB3-208ENST00000623007 MICU2Q8IYU8 434 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 ZNF548Q8NEK5 533 aaPredicted RBP15.73■□□□□ 0.11
LDB3-208ENST00000623007 CLHC1Q8NHS4 586 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 RPLP0P6Q8NHW5 317 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 ZFPM2Q8WW38 1151 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 SLCO4A1Q96BD0 722 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 MENTQ9BUN1 341 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 OSBPL11Q9BXB4 747 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 REXO4Q9GZR2 422 aaKnown RBP15.73■□□□□ 0.11
LDB3-208ENST00000623007 RAD21L1Q9H4I0 556 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 MAGIXQ9H6Y5 334 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 KIR3DX1Q9H7L2 352 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 PCOLCE2Q9UKZ9 415 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 PCDHGB4Q9UN71 923 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 GPSM3Q9Y4H4 160 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 PCDHGA2Q9Y5H1 932 aa15.73■□□□□ 0.11
LDB3-208ENST00000623007 ANTXRLA6NF34 631 aa15.72■□□□□ 0.11
LDB3-208ENST00000623007 MBTPS2O43462 519 aa15.72■□□□□ 0.11
LDB3-208ENST00000623007 PKLRP30613 574 aa15.72■□□□□ 0.11
LDB3-208ENST00000623007 SHMT2P34897 504 aa15.72■□□□□ 0.11
LDB3-208ENST00000623007 CCR5P51681 352 aa15.72■□□□□ 0.11
LDB3-208ENST00000623007 AQP4P55087 323 aa15.72■□□□□ 0.11
LDB3-208ENST00000623007 CHRNB3Q05901 458 aa15.72■□□□□ 0.11
LDB3-208ENST00000623007 PRDX1Q06830 199 aaKnown RBP15.72■□□□□ 0.11
LDB3-208ENST00000623007 UGT8Q16880 541 aa15.72■□□□□ 0.11
LDB3-208ENST00000623007 SFT2D3Q587I9 215 aa15.72■□□□□ 0.11
LDB3-208ENST00000623007 ABRAXAS1Q6UWZ7 409 aa15.72■□□□□ 0.11
LDB3-208ENST00000623007 CALHM3Q86XJ0 350 aa15.72■□□□□ 0.11
LDB3-208ENST00000623007 PGBD3Q8N328 593 aa15.72■□□□□ 0.11
LDB3-208ENST00000623007 LRTOMTQ8WZ04 291 aa15.72■□□□□ 0.11
LDB3-208ENST00000623007 N4BP2L2Q92802 583 aaPredicted RBP15.72■□□□□ 0.11
LDB3-208ENST00000623007 SLC22A18Q96BI1 424 aa15.72■□□□□ 0.11
LDB3-208ENST00000623007 ZNF764Q96H86 408 aaPredicted RBP15.72■□□□□ 0.11
LDB3-208ENST00000623007 CAMK1GQ96NX5 476 aa15.72■□□□□ 0.11
LDB3-208ENST00000623007 INSM2Q96T92 566 aaPredicted RBP15.72■□□□□ 0.11
LDB3-208ENST00000623007 EBPLQ9BY08 206 aa15.72■□□□□ 0.11
LDB3-208ENST00000623007 PRO3102Q9H379 93 aa15.72■□□□□ 0.11
LDB3-208ENST00000623007 OLAHQ9NV23 265 aa15.72■□□□□ 0.11
LDB3-208ENST00000623007 LIMD1Q9UGP4 676 aa15.72■□□□□ 0.11
LDB3-208ENST00000623007 TAC3Q9UHF0 121 aa15.72■□□□□ 0.11
LDB3-208ENST00000623007 NUMA1Q14980 2115 aa15.72■□□□□ 0.11
LDB3-208ENST00000623007 PDZK1P1A8MUH7 402 aa15.71■□□□□ 0.11
LDB3-208ENST00000623007 SLC31A1O15431 190 aa15.71■□□□□ 0.11
LDB3-208ENST00000623007 LATO43561 262 aa15.71■□□□□ 0.11
LDB3-208ENST00000623007 TBX19O60806 448 aa15.71■□□□□ 0.11
LDB3-208ENST00000623007 DEAF1O75398 565 aaPredicted RBP15.71■□□□□ 0.11
LDB3-208ENST00000623007 LDLRP01130 860 aa15.71■□□□□ 0.11
LDB3-208ENST00000623007 ABCB1P08183 1280 aaPredicted RBP15.71■□□□□ 0.11
LDB3-208ENST00000623007 HOXB9P17482 250 aaPredicted RBP15.71■□□□□ 0.11
LDB3-208ENST00000623007 NDUFV2P19404 249 aa15.71■□□□□ 0.11
LDB3-208ENST00000623007 TPMTP51580 245 aa15.71■□□□□ 0.11
LDB3-208ENST00000623007 TRA2BP62995 288 aaKnown RBP15.71■□□□□ 0.11
LDB3-208ENST00000623007 RAE1P78406 368 aaKnown RBP15.71■□□□□ 0.11
LDB3-208ENST00000623007 LRRC32Q14392 662 aa15.71■□□□□ 0.11
LDB3-208ENST00000623007 TMEM35AQ53FP2 167 aa15.71■□□□□ 0.11
LDB3-208ENST00000623007 PPP4R4Q6NUP7 873 aa15.71■□□□□ 0.11
LDB3-208ENST00000623007 COMMD6Q7Z4G1 85 aa15.71■□□□□ 0.11
LDB3-208ENST00000623007 MARVELD2Q8N4S9 558 aa15.71■□□□□ 0.11
LDB3-208ENST00000623007 OR10A6Q8NH74 314 aa15.71■□□□□ 0.11
LDB3-208ENST00000623007 KLK6Q92876 244 aa15.71■□□□□ 0.11
LDB3-208ENST00000623007 BIRC7Q96CA5 298 aa15.71■□□□□ 0.11
LDB3-208ENST00000623007 ERLEC1Q96DZ1 483 aa15.71■□□□□ 0.11
LDB3-208ENST00000623007 TMEM184CQ9NVA4 438 aa15.71■□□□□ 0.11
LDB3-208ENST00000623007 TRNAU1APQ9NX07 287 aaKnown RBP15.71■□□□□ 0.11
LDB3-208ENST00000623007 SLC25A37Q9NYZ2 338 aa15.71■□□□□ 0.11
LDB3-208ENST00000623007 MOSPD1Q9UJG1 213 aa15.71■□□□□ 0.11
LDB3-208ENST00000623007 VPS4AQ9UN37 437 aa15.71■□□□□ 0.11
LDB3-208ENST00000623007 PCYT1BQ9Y5K3 369 aaPredicted RBP15.71■□□□□ 0.11
LDB3-208ENST00000623007 MYO9BQ13459 2157 aa15.71■□□□□ 0.1
LDB3-208ENST00000623007 TCRBV21S2A2A0A5A6 115 aa15.7■□□□□ 0.1
LDB3-208ENST00000623007 ARHGAP10A1A4S6 786 aa15.7■□□□□ 0.1
LDB3-208ENST00000623007 CLEC3AO75596 197 aa15.7■□□□□ 0.1
LDB3-208ENST00000623007 MTHFD1P11586 935 aaKnown RBP15.7■□□□□ 0.1
LDB3-208ENST00000623007 GPX2P18283 190 aa15.7■□□□□ 0.1
LDB3-208ENST00000623007 RPL10P27635 214 aaKnown RBP15.7■□□□□ 0.1
LDB3-208ENST00000623007 RABIFP47224 123 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms