RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 EIF2B3Q9NR50 452 aaKnown RBP7.68□□□□□ -1.18
VPS11-209ENST00000622309 MIOSQ9NXC5 875 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 ARHGAP28Q9P2N2 729 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 NFKBIL1Q9UBC1 381 aaPredicted RBP7.68□□□□□ -1.18
VPS11-209ENST00000622309 TMEFF2Q9UIK5 374 aaPredicted RBP7.68□□□□□ -1.18
VPS11-209ENST00000622309 ZFR2Q9UPR6 939 aaKnown RBP7.68□□□□□ -1.18
VPS11-209ENST00000622309 PQLC2LA1A4F0 135 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 INMT-MINDY4F8WBC2 141 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 CBX4O00257 560 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 SCAMP2O15127 329 aaKnown RBP7.68□□□□□ -1.18
VPS11-209ENST00000622309 SIGLEC6O43699 453 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 MATN4O95460 622 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 APOC3P02656 99 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 TAGLN2P37802 199 aaKnown RBP7.68□□□□□ -1.18
VPS11-209ENST00000622309 ZNF143P52747 638 aaPredicted RBP7.68□□□□□ -1.18
VPS11-209ENST00000622309 RPL6Q02878 288 aaKnown RBP7.68□□□□□ -1.18
VPS11-209ENST00000622309 EMX2Q04743 252 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.68□□□□□ -1.18
VPS11-209ENST00000622309 MAP2K5Q13163 448 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 GRB7Q14451 532 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 GBX1Q14549 363 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 MICAQ29983 383 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 PROX2Q3B8N5 592 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 XKR9Q5GH70 373 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 BEND4Q6ZU67 534 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 USP45Q70EL2 814 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 OVCH2Q7RTZ1 564 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 NUDT13Q86X67 352 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 NRSN1Q8IZ57 195 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 GHDCQ8N2G8 530 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 TBC1D19Q8N5T2 526 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 FAM86B1Q8N7N1 296 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 GMCL1P1Q8NEA9 526 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 FAM151AQ8WW52 585 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 TFAP2BQ92481 460 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 LPPQ93052 612 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 EMID1Q96A84 441 aaPredicted RBP7.68□□□□□ -1.18
VPS11-209ENST00000622309 HHIPL1Q96JK4 782 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 SENP8Q96LD8 212 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 GAL3ST1Q99999 423 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 RBCK1Q9BYM8 510 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 HEXA-AS1Q9H8Q6 139 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 AMBNQ9NP70 447 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 SNTG1Q9NSN8 517 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 ERAP1Q9NZ08 941 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 CTSFQ9UBX1 484 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 KIF25Q9UIL4 384 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 ERVW-1Q9UQF0 538 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 DERAQ9Y315 318 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 MRPL11Q9Y3B7 192 aaKnown RBP7.68□□□□□ -1.18
VPS11-209ENST00000622309 KLK4Q9Y5K2 254 aa7.68□□□□□ -1.18
VPS11-209ENST00000622309 DNMT3AQ9Y6K1 912 aaPredicted RBP7.68□□□□□ -1.18
VPS11-209ENST00000622309 ZNF541Q9H0D2 1346 aa7.67□□□□□ -1.18
VPS11-209ENST00000622309 FZD9O00144 591 aa7.67□□□□□ -1.18
VPS11-209ENST00000622309 PPP6CO00743 305 aa7.67□□□□□ -1.18
VPS11-209ENST00000622309 PLA2G10O15496 165 aa7.67□□□□□ -1.18
VPS11-209ENST00000622309 SLC43A1O75387 559 aa7.67□□□□□ -1.18
VPS11-209ENST00000622309 HLA-EP13747 358 aa7.67□□□□□ -1.18
VPS11-209ENST00000622309 PSMB4P28070 264 aa7.67□□□□□ -1.18
VPS11-209ENST00000622309 CSHL1Q14406 222 aa7.67□□□□□ -1.18
VPS11-209ENST00000622309 SLC6A19Q695T7 634 aa7.67□□□□□ -1.18
VPS11-209ENST00000622309 BICRALQ6AI39 1079 aa7.67□□□□□ -1.18
VPS11-209ENST00000622309 SLC39A4Q6P5W5 647 aa7.67□□□□□ -1.18
VPS11-209ENST00000622309 ANGPTL8Q6UXH0 198 aa7.67□□□□□ -1.18
VPS11-209ENST00000622309 USP50Q70EL3 339 aaPredicted RBP7.67□□□□□ -1.18
VPS11-209ENST00000622309 TMEM179BQ7Z7N9 219 aa7.67□□□□□ -1.18
VPS11-209ENST00000622309 CYP4Z1Q86W10 505 aa7.67□□□□□ -1.18
VPS11-209ENST00000622309 XYLT1Q86Y38 959 aa7.67□□□□□ -1.18
VPS11-209ENST00000622309 SLC34A3Q8N130 599 aa7.67□□□□□ -1.18
VPS11-209ENST00000622309 AVL9Q8NBF6 648 aa7.67□□□□□ -1.18
VPS11-209ENST00000622309 WDR36Q8NI36 951 aaKnown RBP7.67□□□□□ -1.18
VPS11-209ENST00000622309 TSPEARQ8WU66 669 aa7.67□□□□□ -1.18
VPS11-209ENST00000622309 MYO19Q96H55 970 aa7.67□□□□□ -1.18
VPS11-209ENST00000622309 RBP7Q96R05 134 aa7.67□□□□□ -1.18
VPS11-209ENST00000622309 ESRP2Q9H6T0 727 aaKnown RBP7.67□□□□□ -1.18
VPS11-209ENST00000622309 SDR39U1Q9NRG7 319 aaPredicted RBP7.67□□□□□ -1.18
VPS11-209ENST00000622309 GSN-AS1Q9NRJ2 163 aa7.67□□□□□ -1.18
VPS11-209ENST00000622309 CISHQ9NSE2 258 aa7.67□□□□□ -1.18
VPS11-209ENST00000622309 RBFOX1Q9NWB1 397 aaKnown RBP7.67□□□□□ -1.18
VPS11-209ENST00000622309 SMPD4Q9NXE4 827 aa7.67□□□□□ -1.18
VPS11-209ENST00000622309 SLAMF8Q9P0V8 285 aa7.67□□□□□ -1.18
VPS11-209ENST00000622309 HCN3Q9P1Z3 774 aa7.67□□□□□ -1.18
VPS11-209ENST00000622309 PRAMEF33A0A0G2JMD5 474 aa7.67□□□□□ -1.18
VPS11-209ENST00000622309 MED7O43513 233 aa7.67□□□□□ -1.18
VPS11-209ENST00000622309 PRAMEF10O60809 474 aa7.67□□□□□ -1.18
VPS11-209ENST00000622309 MMP20O60882 483 aa7.67□□□□□ -1.18
VPS11-209ENST00000622309 SOCS5O75159 536 aa7.67□□□□□ -1.18
VPS11-209ENST00000622309 C1RP00736 705 aa7.67□□□□□ -1.18
VPS11-209ENST00000622309 CPB1P15086 417 aa7.67□□□□□ -1.18
VPS11-209ENST00000622309 MTPNP58546 118 aa7.67□□□□□ -1.18
VPS11-209ENST00000622309 PSPHP78330 225 aa7.67□□□□□ -1.18
VPS11-209ENST00000622309 GTF2H3Q13889 308 aa7.67□□□□□ -1.18
VPS11-209ENST00000622309 FGL2Q14314 439 aa7.67□□□□□ -1.18
VPS11-209ENST00000622309 MXD4Q14582 209 aaPredicted RBP7.67□□□□□ -1.18
VPS11-209ENST00000622309 CCDC85BQ15834 202 aaPredicted RBP7.67□□□□□ -1.18
VPS11-209ENST00000622309 GPR33Q49SQ1 333 aa7.67□□□□□ -1.18
VPS11-209ENST00000622309 DET1Q7L5Y6 550 aa7.67□□□□□ -1.18
VPS11-209ENST00000622309 MS4A15Q8N5U1 240 aa7.67□□□□□ -1.18
VPS11-209ENST00000622309 C10orf53Q8N6V4 93 aa7.67□□□□□ -1.18
VPS11-209ENST00000622309 EFHBQ8N7U6 833 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms