RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 DET1Q7L5Y6 550 aa16.86■□□□□ 0.29
FAM3A-222ENST00000621967 DSG4Q86SJ6 1040 aa16.86■□□□□ 0.29
FAM3A-222ENST00000621967 TANKQ92844 425 aa16.86■□□□□ 0.29
FAM3A-222ENST00000621967 NRBF2Q96F24 287 aa16.86■□□□□ 0.29
FAM3A-222ENST00000621967 PYURFQ96I23 114 aa16.86■□□□□ 0.29
FAM3A-222ENST00000621967 GPN2Q9H9Y4 310 aaPredicted RBP16.86■□□□□ 0.29
FAM3A-222ENST00000621967 PRSS16Q9NQE7 514 aa16.86■□□□□ 0.29
FAM3A-222ENST00000621967 IL36AQ9UHA7 158 aa16.86■□□□□ 0.29
FAM3A-222ENST00000621967 TMEFF2Q9UIK5 374 aaPredicted RBP16.86■□□□□ 0.29
FAM3A-222ENST00000621967 MBD1Q9UIS9 605 aaPredicted RBP16.86■□□□□ 0.29
FAM3A-222ENST00000621967 TMPRSS11EQ9UL52 423 aa16.86■□□□□ 0.29
FAM3A-222ENST00000621967 NAALAD2Q9Y3Q0 740 aa16.86■□□□□ 0.29
FAM3A-222ENST00000621967 GFYI3L273 518 aa16.86■□□□□ 0.29
FAM3A-222ENST00000621967 SLC16A6O15403 523 aa16.86■□□□□ 0.29
FAM3A-222ENST00000621967 PRAMEF4O60810 478 aa16.86■□□□□ 0.29
FAM3A-222ENST00000621967 CCNA2P20248 432 aa16.86■□□□□ 0.29
FAM3A-222ENST00000621967 ISL1P61371 349 aa16.86■□□□□ 0.29
FAM3A-222ENST00000621967 CD47Q08722 323 aa16.86■□□□□ 0.29
FAM3A-222ENST00000621967 MTAPQ13126 283 aa16.86■□□□□ 0.29
FAM3A-222ENST00000621967 TOP3AQ13472 1001 aaPredicted RBP16.86■□□□□ 0.29
FAM3A-222ENST00000621967 RFX4Q33E94 735 aa16.86■□□□□ 0.29
FAM3A-222ENST00000621967 PTCHD3Q3KNS1 767 aa16.86■□□□□ 0.29
FAM3A-222ENST00000621967 ZNF691Q5VV52 312 aa16.86■□□□□ 0.29
FAM3A-222ENST00000621967 PRAMEF9Q5VWM5 478 aa16.86■□□□□ 0.29
FAM3A-222ENST00000621967 HIPK1Q86Z02 1210 aa16.86■□□□□ 0.29
FAM3A-222ENST00000621967 RASGRP3Q8IV61 690 aa16.86■□□□□ 0.29
FAM3A-222ENST00000621967 FBLIM1Q8WUP2 373 aa16.86■□□□□ 0.29
FAM3A-222ENST00000621967 HSPBAP1Q96EW2 488 aa16.86■□□□□ 0.29
FAM3A-222ENST00000621967 TSSK3Q96PN8 268 aa16.86■□□□□ 0.29
FAM3A-222ENST00000621967 LHPPQ9H008 270 aa16.86■□□□□ 0.29
FAM3A-222ENST00000621967 ADNPQ9H2P0 1102 aa16.86■□□□□ 0.29
FAM3A-222ENST00000621967 BLOC1S6Q9UL45 172 aa16.86■□□□□ 0.29
FAM3A-222ENST00000621967 MMP17Q9ULZ9 603 aa16.86■□□□□ 0.29
FAM3A-222ENST00000621967 LOC100130705A0A1B0GUX0 176 aa16.85■□□□□ 0.29
FAM3A-222ENST00000621967 PRNPP04156 253 aa16.85■□□□□ 0.29
FAM3A-222ENST00000621967 AMD1P17707 334 aa16.85■□□□□ 0.29
FAM3A-222ENST00000621967 NEK2P51955 445 aa16.85■□□□□ 0.29
FAM3A-222ENST00000621967 IL18R1Q13478 541 aa16.85■□□□□ 0.29
FAM3A-222ENST00000621967 CAMK2GQ13555 558 aaPredicted RBP16.85■□□□□ 0.29
FAM3A-222ENST00000621967 MEP1AQ16819 746 aa16.85■□□□□ 0.29
FAM3A-222ENST00000621967 PLEKHS1Q5SXH7 462 aa16.85■□□□□ 0.29
FAM3A-222ENST00000621967 ANKRD26P1Q6NSI1 321 aa16.85■□□□□ 0.29
FAM3A-222ENST00000621967 ZNF551Q7Z340 670 aaPredicted RBP16.85■□□□□ 0.29
FAM3A-222ENST00000621967 ANKRD46Q86W74 232 aa16.85■□□□□ 0.29
FAM3A-222ENST00000621967 DCP2Q8IU60 420 aaKnown RBP16.85■□□□□ 0.29
FAM3A-222ENST00000621967 VRK3Q8IV63 474 aa16.85■□□□□ 0.29
FAM3A-222ENST00000621967 PGBD3Q8N328 593 aa16.85■□□□□ 0.29
FAM3A-222ENST00000621967 RAB2BQ8WUD1 216 aa16.85■□□□□ 0.29
FAM3A-222ENST00000621967 SGCDQ92629 289 aa16.85■□□□□ 0.29
FAM3A-222ENST00000621967 APIPQ96GX9 242 aa16.85■□□□□ 0.29
FAM3A-222ENST00000621967 LRIG1Q96JA1 1093 aa16.85■□□□□ 0.29
FAM3A-222ENST00000621967 MAGEB10Q96LZ2 347 aaPredicted RBP16.85■□□□□ 0.29
FAM3A-222ENST00000621967 GABARAPL1Q9H0R8 117 aa16.85■□□□□ 0.29
FAM3A-222ENST00000621967 ABCG8Q9H221 673 aa16.85■□□□□ 0.29
FAM3A-222ENST00000621967 GPRC5BQ9NZH0 403 aa16.85■□□□□ 0.29
FAM3A-222ENST00000621967 SIT1Q9Y3P8 196 aa16.85■□□□□ 0.29
FAM3A-222ENST00000621967 TTC28Q96AY4 2481 aa16.85■□□□□ 0.29
FAM3A-222ENST00000621967 CKAP5Q14008 2032 aa16.84■□□□□ 0.29
FAM3A-222ENST00000621967 HS6ST1O60243 411 aa16.84■□□□□ 0.29
FAM3A-222ENST00000621967 ATG13O75143 517 aa16.84■□□□□ 0.29
FAM3A-222ENST00000621967 LEFTY1O75610 366 aa16.84■□□□□ 0.29
FAM3A-222ENST00000621967 B3GALT4O96024 378 aa16.84■□□□□ 0.29
FAM3A-222ENST00000621967 UGT2B4P06133 528 aa16.84■□□□□ 0.29
FAM3A-222ENST00000621967 GSNP06396 782 aa16.84■□□□□ 0.29
FAM3A-222ENST00000621967 HIST1H2AGP0C0S8 130 aaPredicted RBP16.84■□□□□ 0.29
FAM3A-222ENST00000621967 ITGAMP11215 1152 aa16.84■□□□□ 0.29
FAM3A-222ENST00000621967 HIST1H2ADP20671 130 aa16.84■□□□□ 0.29
FAM3A-222ENST00000621967 RYKP34925 604 aa16.84■□□□□ 0.29
FAM3A-222ENST00000621967 RANBP1P43487 201 aa16.84■□□□□ 0.29
FAM3A-222ENST00000621967 SPINT3P49223 89 aa16.84■□□□□ 0.29
FAM3A-222ENST00000621967 AP1S2P56377 157 aa16.84■□□□□ 0.29
FAM3A-222ENST00000621967 VAC14Q08AM6 782 aa16.84■□□□□ 0.29
FAM3A-222ENST00000621967 HSPA14Q0VDF9 509 aa16.84■□□□□ 0.29
FAM3A-222ENST00000621967 C16orf72Q14CZ0 275 aa16.84■□□□□ 0.29
FAM3A-222ENST00000621967 ZNF829Q3KNS6 432 aaPredicted RBP16.84■□□□□ 0.29
FAM3A-222ENST00000621967 ARSIQ5FYB1 569 aa16.84■□□□□ 0.29
FAM3A-222ENST00000621967 SERPINA11Q86U17 422 aa16.84■□□□□ 0.29
FAM3A-222ENST00000621967 HIST1H2AHQ96KK5 128 aa16.84■□□□□ 0.29
FAM3A-222ENST00000621967 ZNF641Q96N77 438 aaPredicted RBP16.84■□□□□ 0.29
FAM3A-222ENST00000621967 HIST1H2AJQ99878 128 aa16.84■□□□□ 0.29
FAM3A-222ENST00000621967 H2AFJQ9BTM1 129 aa16.84■□□□□ 0.29
FAM3A-222ENST00000621967 DNAJC11Q9NVH1 559 aa16.84■□□□□ 0.29
FAM3A-222ENST00000621967 PCM1Q15154 2024 aa16.84■□□□□ 0.29
FAM3A-222ENST00000621967 hCG_2014768A0A024R1R8 64 aa16.84■□□□□ 0.29
FAM3A-222ENST00000621967 E2F6O75461 281 aa16.84■□□□□ 0.29
FAM3A-222ENST00000621967 CCNDBP1O95273 360 aa16.84■□□□□ 0.29
FAM3A-222ENST00000621967 MYCLP1P12525 358 aaPredicted RBP16.84■□□□□ 0.29
FAM3A-222ENST00000621967 TRPC1P48995 793 aa16.84■□□□□ 0.29
FAM3A-222ENST00000621967 TPD52P55327 224 aaPredicted RBP16.84■□□□□ 0.29
FAM3A-222ENST00000621967 ZNF33BQ06732 778 aa16.84■□□□□ 0.29
FAM3A-222ENST00000621967 SLC14A1Q13336 389 aa16.84■□□□□ 0.29
FAM3A-222ENST00000621967 FZD5Q13467 585 aa16.84■□□□□ 0.29
FAM3A-222ENST00000621967 DPY19L1Q2PZI1 675 aa16.84■□□□□ 0.29
FAM3A-222ENST00000621967 FRG2Q64ET8 278 aa16.84■□□□□ 0.29
FAM3A-222ENST00000621967 CPZQ66K79 652 aa16.84■□□□□ 0.29
FAM3A-222ENST00000621967 KIAA1211LQ6NV74 962 aa16.84■□□□□ 0.29
FAM3A-222ENST00000621967 SHQ1Q6PI26 577 aaKnown RBP16.84■□□□□ 0.29
FAM3A-222ENST00000621967 GDPD4Q6W3E5 623 aa16.84■□□□□ 0.29
FAM3A-222ENST00000621967 Q6ZNX1 250 aa16.84■□□□□ 0.29
FAM3A-222ENST00000621967 NEK10Q6ZWH5 1172 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms