RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 CFAP47Q6ZTR5 3102 aa17.74■□□□□ 0.43
CIRBP-245ENST00000621399 PCM1Q15154 2024 aa17.74■□□□□ 0.43
CIRBP-245ENST00000621399 E2F3O00716 465 aa17.73■□□□□ 0.43
CIRBP-245ENST00000621399 DLX3O60479 287 aa17.73■□□□□ 0.43
CIRBP-245ENST00000621399 PLIN3O60664 434 aa17.73■□□□□ 0.43
CIRBP-245ENST00000621399 SPAG7O75391 227 aa17.73■□□□□ 0.43
CIRBP-245ENST00000621399 KATNA1O75449 491 aa17.73■□□□□ 0.43
CIRBP-245ENST00000621399 STATHP02808 62 aa17.73■□□□□ 0.43
CIRBP-245ENST00000621399 PROCP04070 461 aa17.73■□□□□ 0.43
CIRBP-245ENST00000621399 RORAP35398 523 aa17.73■□□□□ 0.43
CIRBP-245ENST00000621399 SCTRP47872 440 aa17.73■□□□□ 0.43
CIRBP-245ENST00000621399 CHIT1Q13231 466 aa17.73■□□□□ 0.43
CIRBP-245ENST00000621399 GTF2H2Q13888 395 aa17.73■□□□□ 0.43
CIRBP-245ENST00000621399 ST3GAL2Q16842 350 aa17.73■□□□□ 0.43
CIRBP-245ENST00000621399 HKDC1Q2TB90 917 aa17.73■□□□□ 0.43
CIRBP-245ENST00000621399 PRTGQ2VWP7 1150 aa17.73■□□□□ 0.43
CIRBP-245ENST00000621399 C1orf189Q5VU69 101 aa17.73■□□□□ 0.43
CIRBP-245ENST00000621399 YOD1Q5VVQ6 348 aaPredicted RBP17.73■□□□□ 0.43
CIRBP-245ENST00000621399 GTF2H2CQ6P1K8 395 aa17.73■□□□□ 0.43
CIRBP-245ENST00000621399 GOLGA7Q7Z5G4 137 aa17.73■□□□□ 0.43
CIRBP-245ENST00000621399 VN1R4Q7Z5H5 301 aa17.73■□□□□ 0.43
CIRBP-245ENST00000621399 ASPGQ86U10 573 aa17.73■□□□□ 0.43
CIRBP-245ENST00000621399 KRT78Q8N1N4 520 aa17.73■□□□□ 0.43
CIRBP-245ENST00000621399 CAMKVQ8NCB2 501 aa17.73■□□□□ 0.43
CIRBP-245ENST00000621399 SLC13A3Q8WWT9 602 aa17.73■□□□□ 0.43
CIRBP-245ENST00000621399 MR1Q95460 341 aa17.73■□□□□ 0.43
CIRBP-245ENST00000621399 PTCD3Q96EY7 689 aaKnown RBP17.73■□□□□ 0.43
CIRBP-245ENST00000621399 RUFY1Q96T51 708 aa17.73■□□□□ 0.43
CIRBP-245ENST00000621399 EFCAB11Q9BUY7 163 aa17.73■□□□□ 0.43
CIRBP-245ENST00000621399 SARGQ9BW04 601 aa17.73■□□□□ 0.43
CIRBP-245ENST00000621399 C12orf65Q9H3J6 166 aaKnown RBP17.73■□□□□ 0.43
CIRBP-245ENST00000621399 IPPKQ9H8X2 491 aa17.73■□□□□ 0.43
CIRBP-245ENST00000621399 LHX9Q9NQ69 397 aa17.73■□□□□ 0.43
CIRBP-245ENST00000621399 MKS1Q9NXB0 559 aa17.73■□□□□ 0.43
CIRBP-245ENST00000621399 SENP1Q9P0U3 644 aa17.73■□□□□ 0.43
CIRBP-245ENST00000621399 NDOR1Q9UHB4 597 aa17.73■□□□□ 0.43
CIRBP-245ENST00000621399 RUVBL1Q9Y265 456 aaKnown RBP17.73■□□□□ 0.43
CIRBP-245ENST00000621399 CACNA1GO43497 2377 aa17.73■□□□□ 0.43
CIRBP-245ENST00000621399 DMXL2Q8TDJ6 3036 aa17.72■□□□□ 0.43
CIRBP-245ENST00000621399 P2RX6O15547 441 aa17.72■□□□□ 0.43
CIRBP-245ENST00000621399 PRAMEF4O60810 478 aa17.72■□□□□ 0.43
CIRBP-245ENST00000621399 SERPIND1P05546 499 aa17.72■□□□□ 0.43
CIRBP-245ENST00000621399 MYZAPP0CAP1 466 aa17.72■□□□□ 0.43
CIRBP-245ENST00000621399 MYL2P10916 166 aa17.72■□□□□ 0.43
CIRBP-245ENST00000621399 H2AFXP16104 143 aaPredicted RBP17.72■□□□□ 0.43
CIRBP-245ENST00000621399 AGXTP21549 392 aa17.72■□□□□ 0.43
CIRBP-245ENST00000621399 AHRP35869 848 aa17.72■□□□□ 0.43
CIRBP-245ENST00000621399 STAT5AP42229 794 aa17.72■□□□□ 0.43
CIRBP-245ENST00000621399 GCGRP47871 477 aa17.72■□□□□ 0.43
CIRBP-245ENST00000621399 NFKB2Q00653 900 aa17.72■□□□□ 0.43
CIRBP-245ENST00000621399 ABHD18Q0P651 414 aa17.72■□□□□ 0.43
CIRBP-245ENST00000621399 LAPTM5Q13571 262 aa17.72■□□□□ 0.43
CIRBP-245ENST00000621399 TBCCQ15814 346 aa17.72■□□□□ 0.43
CIRBP-245ENST00000621399 HIST2H2ACQ16777 129 aaPredicted RBP17.72■□□□□ 0.43
CIRBP-245ENST00000621399 PAGE2BQ5JRK9 111 aa17.72■□□□□ 0.43
CIRBP-245ENST00000621399 MANEAQ5SRI9 462 aa17.72■□□□□ 0.43
CIRBP-245ENST00000621399 PRAMEF9Q5VWM5 478 aa17.72■□□□□ 0.43
CIRBP-245ENST00000621399 HIST2H2AA3Q6FI13 130 aa17.72■□□□□ 0.43
CIRBP-245ENST00000621399 FAM199XQ6PEV8 388 aaPredicted RBP17.72■□□□□ 0.43
CIRBP-245ENST00000621399 TMIGD1Q6UXZ0 262 aa17.72■□□□□ 0.43
CIRBP-245ENST00000621399 SLC22A9Q8IVM8 553 aa17.72■□□□□ 0.43
CIRBP-245ENST00000621399 SPACA3Q8IXA5 215 aa17.72■□□□□ 0.43
CIRBP-245ENST00000621399 DSELQ8IZU8 1212 aa17.72■□□□□ 0.43
CIRBP-245ENST00000621399 ATP6V1E2Q96A05 226 aa17.72■□□□□ 0.43
CIRBP-245ENST00000621399 KIAA1143Q96AT1 154 aaPredicted RBP17.72■□□□□ 0.43
CIRBP-245ENST00000621399 WDR34Q96EX3 536 aa17.72■□□□□ 0.43
CIRBP-245ENST00000621399 PGM2Q96G03 612 aa17.72■□□□□ 0.43
CIRBP-245ENST00000621399 MACROD1Q9BQ69 325 aa17.72■□□□□ 0.43
CIRBP-245ENST00000621399 AKIRIN1Q9H9L7 192 aaPredicted RBP17.72■□□□□ 0.43
CIRBP-245ENST00000621399 ZFP69BQ9UJL9 534 aa17.72■□□□□ 0.43
CIRBP-245ENST00000621399 PCTPQ9UKL6 214 aa17.72■□□□□ 0.43
CIRBP-245ENST00000621399 PLLPQ9Y342 182 aa17.72■□□□□ 0.43
CIRBP-245ENST00000621399 A0A087WV48 116 aa17.71■□□□□ 0.43
CIRBP-245ENST00000621399 LOC101059948A0A1B0GTJ6 334 aa17.71■□□□□ 0.43
CIRBP-245ENST00000621399 A0A1B0GX78 115 aa17.71■□□□□ 0.43
CIRBP-245ENST00000621399 GOLGA6L10A6NI86 522 aa17.71■□□□□ 0.43
CIRBP-245ENST00000621399 G3V2L1 256 aa17.71■□□□□ 0.43
CIRBP-245ENST00000621399 DSCR3O14972 297 aa17.71■□□□□ 0.43
CIRBP-245ENST00000621399 NDUFS4O43181 175 aa17.71■□□□□ 0.43
CIRBP-245ENST00000621399 WFS1O76024 890 aa17.71■□□□□ 0.43
CIRBP-245ENST00000621399 SLC35G6P0C7Q6 338 aa17.71■□□□□ 0.43
CIRBP-245ENST00000621399 ATXN8OSP0DMR3 200 aa17.71■□□□□ 0.43
CIRBP-245ENST00000621399 CPA3P15088 417 aa17.71■□□□□ 0.43
CIRBP-245ENST00000621399 CREB1P16220 341 aa17.71■□□□□ 0.43
CIRBP-245ENST00000621399 CASP2P42575 452 aa17.71■□□□□ 0.43
CIRBP-245ENST00000621399 PRKAA2P54646 552 aa17.71■□□□□ 0.43
CIRBP-245ENST00000621399 EMP3P54852 163 aa17.71■□□□□ 0.43
CIRBP-245ENST00000621399 HERVK_113P63132 956 aa17.71■□□□□ 0.43
CIRBP-245ENST00000621399 PCDH1Q08174 1060 aa17.71■□□□□ 0.43
CIRBP-245ENST00000621399 MUM1Q2TAK8 710 aa17.71■□□□□ 0.43
CIRBP-245ENST00000621399 GARNL3Q5VVW2 1013 aa17.71■□□□□ 0.43
CIRBP-245ENST00000621399 ZYG11AQ6WRX3 759 aa17.71■□□□□ 0.43
CIRBP-245ENST00000621399 VASH2Q86V25 355 aa17.71■□□□□ 0.43
CIRBP-245ENST00000621399 MYLK4Q86YV6 388 aaPredicted RBP17.71■□□□□ 0.43
CIRBP-245ENST00000621399 ANKRD53Q8N9V6 530 aa17.71■□□□□ 0.43
CIRBP-245ENST00000621399 RDH11Q8TC12 318 aa17.71■□□□□ 0.43
CIRBP-245ENST00000621399 PROKR1Q8TCW9 393 aa17.71■□□□□ 0.43
CIRBP-245ENST00000621399 PPP4R1Q8TF05 950 aa17.71■□□□□ 0.43
CIRBP-245ENST00000621399 TM4SF19Q96DZ7 209 aa17.71■□□□□ 0.43
CIRBP-245ENST00000621399 CCDC126Q96EE4 140 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms