RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 ZUFSPQ96AP4 578 aa7.45□□□□□ -1.22
CLK1-215ENST00000621181 IL17FQ96PD4 163 aa7.45□□□□□ -1.22
CLK1-215ENST00000621181 TRIM8Q9BZR9 551 aa7.45□□□□□ -1.22
CLK1-215ENST00000621181 STMN4Q9H169 189 aaPredicted RBP7.45□□□□□ -1.22
CLK1-215ENST00000621181 INTS9Q9NV88 658 aaKnown RBP7.45□□□□□ -1.22
CLK1-215ENST00000621181 ABI3Q9P2A4 366 aa7.45□□□□□ -1.22
CLK1-215ENST00000621181 ZC3H7BQ9UGR2 993 aaKnown RBP7.45□□□□□ -1.22
CLK1-215ENST00000621181 IDSB3KWA1 339 aa7.45□□□□□ -1.22
CLK1-215ENST00000621181 OR1I1O60431 355 aa7.45□□□□□ -1.22
CLK1-215ENST00000621181 SNX3O60493 162 aa7.45□□□□□ -1.22
CLK1-215ENST00000621181 SLC19A2O60779 497 aa7.45□□□□□ -1.22
CLK1-215ENST00000621181 CTSVO60911 334 aa7.45□□□□□ -1.22
CLK1-215ENST00000621181 ABHD2P08910 425 aa7.45□□□□□ -1.22
CLK1-215ENST00000621181 MST1P26927 711 aa7.45□□□□□ -1.22
CLK1-215ENST00000621181 PTPN7P35236 360 aa7.45□□□□□ -1.22
CLK1-215ENST00000621181 SLCO1A2P46721 670 aa7.45□□□□□ -1.22
CLK1-215ENST00000621181 CALCOCO2Q13137 446 aa7.45□□□□□ -1.22
CLK1-215ENST00000621181 SNX1Q13596 522 aa7.45□□□□□ -1.22
CLK1-215ENST00000621181 LONRF1Q17RB8 773 aa7.45□□□□□ -1.22
CLK1-215ENST00000621181 MUM1Q2TAK8 710 aa7.45□□□□□ -1.22
CLK1-215ENST00000621181 GALNTL6Q49A17 601 aa7.45□□□□□ -1.22
CLK1-215ENST00000621181 ATG9BQ674R7 924 aa7.45□□□□□ -1.22
CLK1-215ENST00000621181 FAAH2Q6GMR7 532 aa7.45□□□□□ -1.22
CLK1-215ENST00000621181 HIBCHQ6NVY1 386 aaPredicted RBP7.45□□□□□ -1.22
CLK1-215ENST00000621181 TTC23LQ6PF05 361 aa7.45□□□□□ -1.22
CLK1-215ENST00000621181 DRICH1Q6PGQ1 229 aaPredicted RBP7.45□□□□□ -1.22
CLK1-215ENST00000621181 RIPOR1Q6ZS17 1223 aa7.45□□□□□ -1.22
CLK1-215ENST00000621181 NDUFAF7Q7L592 441 aa7.45□□□□□ -1.22
CLK1-215ENST00000621181 VRK3Q8IV63 474 aa7.45□□□□□ -1.22
CLK1-215ENST00000621181 SLC22A15Q8IZD6 547 aa7.45□□□□□ -1.22
CLK1-215ENST00000621181 CYP4X1Q8N118 509 aa7.45□□□□□ -1.22
CLK1-215ENST00000621181 OR2L8Q8NGY9 312 aa7.45□□□□□ -1.22
CLK1-215ENST00000621181 GSDMBQ8TAX9 411 aa7.45□□□□□ -1.22
CLK1-215ENST00000621181 MAGEC3Q8TD91 643 aa7.45□□□□□ -1.22
CLK1-215ENST00000621181 GRK7Q8WTQ7 553 aa7.45□□□□□ -1.22
CLK1-215ENST00000621181 SKA2Q8WVK7 121 aaPredicted RBP7.45□□□□□ -1.22
CLK1-215ENST00000621181 ASZ1Q8WWH4 475 aa7.45□□□□□ -1.22
CLK1-215ENST00000621181 ZNF285Q96NJ3 590 aa7.45□□□□□ -1.22
CLK1-215ENST00000621181 MENTQ9BUN1 341 aa7.45□□□□□ -1.22
CLK1-215ENST00000621181 YIPF2Q9BWQ6 316 aa7.45□□□□□ -1.22
CLK1-215ENST00000621181 TSSK1BQ9BXA7 367 aa7.45□□□□□ -1.22
CLK1-215ENST00000621181 RAB11FIP5Q9BXF6 653 aa7.45□□□□□ -1.22
CLK1-215ENST00000621181 OSBPL8Q9BZF1 889 aa7.45□□□□□ -1.22
CLK1-215ENST00000621181 LRRC40Q9H9A6 602 aa7.45□□□□□ -1.22
CLK1-215ENST00000621181 HOMER3Q9NSC5 361 aa7.45□□□□□ -1.22
CLK1-215ENST00000621181 A0A0J9YVX5 310 aa7.44□□□□□ -1.22
CLK1-215ENST00000621181 MROH6A6NGR9 719 aa7.44□□□□□ -1.22
CLK1-215ENST00000621181 SMIM23A6NLE4 172 aa7.44□□□□□ -1.22
CLK1-215ENST00000621181 TARM1B6A8C7 271 aa7.44□□□□□ -1.22
CLK1-215ENST00000621181 MGRN1O60291 552 aa7.44□□□□□ -1.22
CLK1-215ENST00000621181 WFS1O76024 890 aa7.44□□□□□ -1.22
CLK1-215ENST00000621181 FKBP9O95302 570 aa7.44□□□□□ -1.22
CLK1-215ENST00000621181 BMP10O95393 424 aa7.44□□□□□ -1.22
CLK1-215ENST00000621181 ACSL3O95573 720 aa7.44□□□□□ -1.22
CLK1-215ENST00000621181 WDPCPO95876 746 aa7.44□□□□□ -1.22
CLK1-215ENST00000621181 SERPINA7P05543 415 aa7.44□□□□□ -1.22
CLK1-215ENST00000621181 APOA4P06727 396 aa7.44□□□□□ -1.22
CLK1-215ENST00000621181 COX6A1P12074 109 aa7.44□□□□□ -1.22
CLK1-215ENST00000621181 FBLP22087 321 aaKnown RBP7.44□□□□□ -1.22
CLK1-215ENST00000621181 PSMB5P28074 263 aa7.44□□□□□ -1.22
CLK1-215ENST00000621181 GCAP28676 217 aa7.44□□□□□ -1.22
CLK1-215ENST00000621181 SSTR2P30874 369 aa7.44□□□□□ -1.22
CLK1-215ENST00000621181 CCR7P32248 378 aa7.44□□□□□ -1.22
CLK1-215ENST00000621181 FOXN2P32314 431 aa7.44□□□□□ -1.22
CLK1-215ENST00000621181 SOX11P35716 441 aa7.44□□□□□ -1.22
CLK1-215ENST00000621181 EMP2P54851 167 aa7.44□□□□□ -1.22
CLK1-215ENST00000621181 AP2B1P63010 937 aa7.44□□□□□ -1.22
CLK1-215ENST00000621181 EEF1A2Q05639 463 aaKnown RBP7.44□□□□□ -1.22
CLK1-215ENST00000621181 P3H1Q32P28 736 aa7.44□□□□□ -1.22
CLK1-215ENST00000621181 CCDC38Q502W7 563 aa7.44□□□□□ -1.22
CLK1-215ENST00000621181 ABHD17BQ5VST6 288 aa7.44□□□□□ -1.22
CLK1-215ENST00000621181 KCTD11Q693B1 232 aa7.44□□□□□ -1.22
CLK1-215ENST00000621181 FRMPD2BQ6IN97 320 aa7.44□□□□□ -1.22
CLK1-215ENST00000621181 CEP97Q8IW35 865 aa7.44□□□□□ -1.22
CLK1-215ENST00000621181 RAB42Q8N4Z0 105 aa7.44□□□□□ -1.22
CLK1-215ENST00000621181 DNAJB8Q8NHS0 232 aa7.44□□□□□ -1.22
CLK1-215ENST00000621181 CKAP2Q8WWK9 683 aa7.44□□□□□ -1.22
CLK1-215ENST00000621181 PSMF1Q92530 271 aa7.44□□□□□ -1.22
CLK1-215ENST00000621181 PWWP2AQ96N64 755 aa7.44□□□□□ -1.22
CLK1-215ENST00000621181 MIPEPQ99797 713 aa7.44□□□□□ -1.22
CLK1-215ENST00000621181 RIC8BQ9NVN3 520 aa7.44□□□□□ -1.22
CLK1-215ENST00000621181 STOX2Q9P2F5 926 aaPredicted RBP7.44□□□□□ -1.22
CLK1-215ENST00000621181 TRPC4Q9UBN4 977 aa7.44□□□□□ -1.22
CLK1-215ENST00000621181 ASIC3Q9UHC3 531 aa7.44□□□□□ -1.22
CLK1-215ENST00000621181 TINAGQ9UJW2 476 aa7.44□□□□□ -1.22
CLK1-215ENST00000621181 EFR3BQ9Y2G0 817 aa7.44□□□□□ -1.22
CLK1-215ENST00000621181 ACTL7BQ9Y614 415 aa7.44□□□□□ -1.22
CLK1-215ENST00000621181 LOC105369274A0A096LPK9 316 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 IGHV1-45A0A0A0MS14 117 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 LOC102723532A0A0G2JNH3 316 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 TMEM120BA0PK00 339 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 CCDC162PA2VCL2 907 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 IQCF5A8MTL0 148 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 FOXO6A8MYZ6 492 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 FFAR3O14843 346 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 GPR42O15529 346 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 ZNF189O75820 626 aaPredicted RBP7.43□□□□□ -1.22
CLK1-215ENST00000621181 TJP3O95049 919 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 MED26O95402 600 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 GAS8O95995 478 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms