RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 LENG8Q96PV6 779 aaPredicted RBP6.99□□□□□ -1.29
COLCA1-205ENST00000620864 DDX4Q9NQI0 724 aaKnown RBP6.99□□□□□ -1.29
COLCA1-205ENST00000620864 COQ3Q9NZJ6 369 aa6.99□□□□□ -1.29
COLCA1-205ENST00000620864 ATRNO75882 1429 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 LOC100509620A0A075B734 347 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 AURKAO14965 403 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 APODP05090 189 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 LGALS2P05162 132 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 MPSTP25325 297 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 ABCG1P45844 678 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 CLCN7P51798 805 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 CLCQ05315 142 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 C2orf80Q0P641 193 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 PIGGQ5H8A4 983 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 CRB2Q5IJ48 1285 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 UBAP2Q5T6F2 1119 aaKnown RBP6.98□□□□□ -1.29
COLCA1-205ENST00000620864 KIAA1614Q5VZ46 1190 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 GLT8D1Q68CQ7 371 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 FAM122CQ6P4D5 195 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 SHKBP1Q8TBC3 707 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 TSPEARQ8WU66 669 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 MYLIPQ8WY64 445 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 ZNF641Q96N77 438 aaPredicted RBP6.98□□□□□ -1.29
COLCA1-205ENST00000620864 INPP4AQ96PE3 977 aaPredicted RBP6.98□□□□□ -1.29
COLCA1-205ENST00000620864 CDC6Q99741 560 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 STUB1Q9UNE7 303 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 CNTN6Q9UQ52 1028 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 MYH9P35579 1960 aaKnown RBP6.98□□□□□ -1.29
COLCA1-205ENST00000620864 RDH16O75452 317 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 ATP6AP2O75787 350 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 CHRNB1P11230 501 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 COL6A1P12109 1028 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 PKMP14618 531 aaKnown RBP6.98□□□□□ -1.29
COLCA1-205ENST00000620864 PRPS1L1P21108 318 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 MAOAP21397 527 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 FPR1P21462 350 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 PRKXP51817 358 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 POLR2HP52434 150 aaKnown RBP6.98□□□□□ -1.29
COLCA1-205ENST00000620864 ACTBP60709 375 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 ACTG1P63261 375 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 GTF2H2Q13888 395 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 GK2Q14410 553 aaPredicted RBP6.98□□□□□ -1.29
COLCA1-205ENST00000620864 GTF2H2CQ6P1K8 395 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 ALDH16A1Q8IZ83 802 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 TMEM145Q8NBT3 493 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 AUTS2Q8WXX7 1259 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 NKD1Q969G9 470 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 OR52B2Q96RD2 323 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 TUBG2Q9NRH3 451 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 GNG13Q9P2W3 67 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 FAM230AA0A1W2PPH8 454 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 TTC24A2A3L6 582 aaPredicted RBP6.98□□□□□ -1.29
COLCA1-205ENST00000620864 E5RJQ4 531 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 OXSR1O95747 527 aaPredicted RBP6.98□□□□□ -1.29
COLCA1-205ENST00000620864 HSD11B1P28845 292 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 CMPK1P30085 196 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 NFKB2Q00653 900 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 GALK2Q01415 458 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.98□□□□□ -1.29
COLCA1-205ENST00000620864 KRBOX4Q5JUW0 171 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 DET1Q7L5Y6 550 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 CPA6Q8N4T0 437 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 ENDOVQ8N8Q3 282 aaKnown RBP6.98□□□□□ -1.29
COLCA1-205ENST00000620864 MAPK15Q8TD08 544 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 ELP5Q8TE02 316 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 XAGE5Q8WWM1 108 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 RRNAD1Q96FB5 475 aaKnown RBP6.98□□□□□ -1.29
COLCA1-205ENST00000620864 LURAP1Q96LR2 239 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 WACQ9BTA9 647 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 TMEM185BQ9H7F4 350 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 NANSQ9NR45 359 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 MGAT4BQ9UQ53 548 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 MRPL42Q9Y6G3 142 aaKnown RBP6.98□□□□□ -1.29
COLCA1-205ENST00000620864 TMEM131LA2VDJ0 1609 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 ELOA3DA6NLF2 546 aaPredicted RBP6.98□□□□□ -1.29
COLCA1-205ENST00000620864 CAPN14A8MX76 684 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 E9PAM4 449 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 NFKBIEO00221 500 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 E2F3O00716 465 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 RFPL2O75678 378 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 RBBP9O75884 186 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 PABPC4LP0CB38 370 aaKnown RBP6.98□□□□□ -1.29
COLCA1-205ENST00000620864 EDNRAP25101 427 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 IDH3GP51553 393 aaPredicted RBP6.98□□□□□ -1.29
COLCA1-205ENST00000620864 ELOA3BQ3SY89 546 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 NOMO2Q5JPE7 1267 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 SPIN3Q5JUX0 258 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 FKBP1CQ5VVH2 108 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 ANKRD22Q5VYY1 191 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 DRICH1Q6PGQ1 229 aaPredicted RBP6.98□□□□□ -1.29
COLCA1-205ENST00000620864 S100A7AQ86SG5 101 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 BEST3Q8N1M1 668 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 NAT16Q8N8M0 369 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 ELOA3Q8NG57 546 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 DPF1Q92782 380 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 GTPBP3Q969Y2 492 aaKnown RBP6.98□□□□□ -1.29
COLCA1-205ENST00000620864 LRRC58Q96CX6 371 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 LRIG1Q96JA1 1093 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 YIPF4Q9BSR8 244 aa6.98□□□□□ -1.29
COLCA1-205ENST00000620864 SERINC1Q9NRX5 453 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms