RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 CBFA2T3O75081 653 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 VPS4BO75351 444 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 SKAP2O75563 359 aaPredicted RBP7.69□□□□□ -1.18
CPNE3-209ENST00000620393 C9P02748 559 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 PCNAP12004 261 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 HSD3B1P14060 373 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 PVRP15151 417 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 MAGP20916 626 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 CDH3P22223 829 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 ACP1P24666 158 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 PTX3P26022 381 aaPredicted RBP7.69□□□□□ -1.18
CPNE3-209ENST00000620393 HSD3B2P26439 372 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 SERPINB1P30740 379 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 PIK3CBP42338 1070 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 PPM1FP49593 454 aaPredicted RBP7.69□□□□□ -1.18
CPNE3-209ENST00000620393 CCL7P80098 99 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 MEF2AQ02078 507 aaPredicted RBP7.69□□□□□ -1.18
CPNE3-209ENST00000620393 ZIC1Q15915 447 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 AASDHQ4L235 1098 aaPredicted RBP7.69□□□□□ -1.18
CPNE3-209ENST00000620393 SLC9B1Q4ZJI4 515 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 METTL21CQ5VZV1 264 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 FAM219BQ5XKK7 198 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 TMEM71Q6P5X7 295 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 LARP4Q71RC2 724 aaKnown RBP eCLIP7.69□□□□□ -1.18
CPNE3-209ENST00000620393 ADCK2Q7Z695 626 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 PLD3Q8IV08 490 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 DDIASQ8IXT1 998 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 CARFQ8N187 725 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 GBP7Q8N8V2 638 aaPredicted RBP7.69□□□□□ -1.18
CPNE3-209ENST00000620393 ANKS4BQ8N8V4 417 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 ANKRD53Q8N9V6 530 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 MFSD9Q8NBP5 474 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 TTLQ8NG68 377 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 CEP70Q8NHQ1 597 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 HUS1BQ8NHY5 278 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 IFI44Q8TCB0 444 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 C10orf82Q8WW14 230 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 C19orf60Q96EN9 201 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 SEC16BQ96JE7 1060 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 MAELQ96JY0 434 aaKnown RBP7.69□□□□□ -1.18
CPNE3-209ENST00000620393 TGM7Q96PF1 710 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 CDC6Q99741 560 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 MAP3K3Q99759 626 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 DPYSL5Q9BPU6 564 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 CCDC3Q9BQI4 270 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 EBF4Q9BQW3 602 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 TMEM120AQ9BXJ8 343 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 AKTIPQ9H8T0 292 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 BRF2Q9HAW0 419 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 FARSBQ9NSD9 589 aaKnown RBP7.69□□□□□ -1.18
CPNE3-209ENST00000620393 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.69□□□□□ -1.18
CPNE3-209ENST00000620393 PDP2Q9P2J9 529 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 PILRAQ9UKJ1 303 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 PPT2Q9UMR5 302 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 BTRCQ9Y297 605 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 ARL2BPQ9Y2Y0 163 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 HCN4Q9Y3Q4 1203 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 CCL27Q9Y4X3 112 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 LRP4O75096 1905 aa7.69□□□□□ -1.18
CPNE3-209ENST00000620393 ARHGEF17Q96PE2 2063 aaPredicted RBP7.69□□□□□ -1.18
CPNE3-209ENST00000620393 PCDH15Q96QU1 1955 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 TDRD6O60522 2096 aaKnown RBP7.68□□□□□ -1.18
CPNE3-209ENST00000620393 GOLGA8QA0A0J9YX86 632 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 ATP6AP2A0A1C7CYW4 349 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 GOLGA8OA6NCC3 632 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 TLCD2A6NGC4 264 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 MAGEB17A8MXT2 336 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 NPIPB8E9PQR5 432 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 GOLGA8NF8WBI6 632 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 HAT1O14929 419 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 TOX3O15405 576 aaPredicted RBP7.68□□□□□ -1.18
CPNE3-209ENST00000620393 KIF1CO43896 1103 aaKnown RBP7.68□□□□□ -1.18
CPNE3-209ENST00000620393 PRAMEF10O60809 474 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 CTSVO60911 334 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 CLEC3AO75596 197 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 ATP6AP2O75787 350 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 ZBTB11O95625 1053 aaPredicted RBP7.68□□□□□ -1.18
CPNE3-209ENST00000620393 CPNE6O95741 557 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 RPLP0P05388 317 aaKnown RBP7.68□□□□□ -1.18
CPNE3-209ENST00000620393 GP1BAP07359 652 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 PRR35P0CG20 571 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 EZRP15311 586 aaKnown RBP7.68□□□□□ -1.18
CPNE3-209ENST00000620393 ST6GAL1P15907 406 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 PRPH2P23942 346 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 GSTM2P28161 218 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 EPHA3P29320 983 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 AHRP35869 848 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 BCL6P41182 706 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 GFERP55789 205 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 RPS15AP62244 130 aaKnown RBP7.68□□□□□ -1.18
CPNE3-209ENST00000620393 RPS13P62277 151 aaKnown RBP7.68□□□□□ -1.18
CPNE3-209ENST00000620393 PHEXP78562 749 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 GABPB1Q06547 395 aaPredicted RBP7.68□□□□□ -1.18
CPNE3-209ENST00000620393 CSTF3Q12996 717 aaKnown RBP7.68□□□□□ -1.18
CPNE3-209ENST00000620393 TUBB3Q13509 450 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 DDX39BQ13838 428 aaKnown RBP7.68□□□□□ -1.18
CPNE3-209ENST00000620393 SMU1Q2TAY7 513 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 LSM12Q3MHD2 195 aaKnown RBP7.68□□□□□ -1.18
CPNE3-209ENST00000620393 XKR7Q5GH72 579 aa7.68□□□□□ -1.18
CPNE3-209ENST00000620393 ZC3H12BQ5HYM0 836 aaKnown RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms