RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 ALOX15P16050 662 aaPredicted RBP5.05□□□□□ -1.6
SHMT1-211ENST00000618902 ZNF37AP17032 561 aaPredicted RBP5.05□□□□□ -1.6
SHMT1-211ENST00000618902 NELFEP18615 380 aaKnown RBP5.05□□□□□ -1.6
SHMT1-211ENST00000618902 PSMB5P28074 263 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 SLC5A2P31639 672 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 CBSP35520 551 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 ACTR3P61158 418 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 NAA20P61599 178 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 RELAQ04206 551 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 COL9A2Q14055 689 aaPredicted RBP5.05□□□□□ -1.6
SHMT1-211ENST00000618902 KRT33BQ14525 404 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 USP10Q14694 798 aaKnown RBP5.05□□□□□ -1.6
SHMT1-211ENST00000618902 KIR2DS3Q14952 304 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 ARHGAP19Q14CB8 494 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 TSNQ15631 228 aaKnown RBP5.05□□□□□ -1.6
SHMT1-211ENST00000618902 ZIC1Q15915 447 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 ADRM1Q16186 407 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 CYP2A13Q16696 494 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 PPP1R3AQ16821 1122 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 MUM1Q2TAK8 710 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 C18orf21Q32NC0 220 aaPredicted RBP5.05□□□□□ -1.6
SHMT1-211ENST00000618902 TTLL9Q3SXZ7 439 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 SNAP47Q5SQN1 464 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 MROH9Q5TGP6 573 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 YOD1Q5VVQ6 348 aaPredicted RBP5.05□□□□□ -1.6
SHMT1-211ENST00000618902 UGT3A1Q6NUS8 523 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 ZFP1Q6P2D0 407 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 SBSNQ6UWP8 590 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 CCDC81Q6ZN84 652 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 FAM92BQ6ZTR7 304 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 PPP1R3BQ86XI6 285 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 HPS6Q86YV9 775 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 DCUN1D3Q8IWE4 304 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 SCUBE1Q8IWY4 988 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 ALDH16A1Q8IZ83 802 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 CENPLQ8N0S6 344 aaPredicted RBP5.05□□□□□ -1.6
SHMT1-211ENST00000618902 NLGN4XQ8N0W4 816 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 PLD6Q8N2A8 252 aaKnown RBP5.05□□□□□ -1.6
SHMT1-211ENST00000618902 D2HGDHQ8N465 521 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 BMPERQ8N8U9 685 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 NLGN4YQ8NFZ3 816 aaPredicted RBP5.05□□□□□ -1.6
SHMT1-211ENST00000618902 PPP1R14CQ8TAE6 165 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 ZFAND2BQ8WV99 257 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 LCN9Q8WX39 176 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 UTP4Q969X6 686 aaKnown RBP5.05□□□□□ -1.6
SHMT1-211ENST00000618902 ZUFSPQ96AP4 578 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 PDLIM5Q96HC4 596 aaKnown RBP5.05□□□□□ -1.6
SHMT1-211ENST00000618902 MS4A3Q96HJ5 214 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 UBXN10Q96LJ8 280 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 FOPNLQ96NB1 174 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 GPR78Q96P69 363 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 IP6K3Q96PC2 410 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 TGM7Q96PF1 710 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 FAM111AQ96PZ2 611 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 TRAPPC9Q96Q05 1148 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 OR2A14Q96R47 310 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 MAP3K3Q99759 626 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 TMEM120AQ9BXJ8 343 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 SLC12A9Q9BXP2 914 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 CADM1Q9BY67 442 aaKnown RBP5.05□□□□□ -1.6
SHMT1-211ENST00000618902 KLHL25Q9H0H3 589 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 CCDC68Q9H2F9 335 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 ADNPQ9H2P0 1102 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 Q9H521 79 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 MLXIPLQ9NP71 852 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 SLCO1B3Q9NPD5 702 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 SNX15Q9NRS6 342 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 INTS7Q9NVH2 962 aaKnown RBP5.05□□□□□ -1.6
SHMT1-211ENST00000618902 HRASLS2Q9NWW9 162 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 OCIAD1Q9NX40 245 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 SIDT1Q9NXL6 827 aaKnown RBP5.05□□□□□ -1.6
SHMT1-211ENST00000618902 SLC39A1Q9NY26 324 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 TAS2R13Q9NYV9 303 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 VTI1BQ9UEU0 232 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 KLHL3Q9UH77 587 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 PILRAQ9UKJ1 303 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 POMT2Q9UKY4 750 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 PRPF19Q9UMS4 504 aaKnown RBP5.05□□□□□ -1.6
SHMT1-211ENST00000618902 LHX6Q9UPM6 363 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 SH2B3Q9UQQ2 575 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 PDE10AQ9Y233 779 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 BTRCQ9Y297 605 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 KLHL20Q9Y2M5 609 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 TDRKHQ9Y2W6 561 aaKnown RBP5.05□□□□□ -1.6
SHMT1-211ENST00000618902 PCDHB3Q9Y5E6 796 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 PCDHGA6Q9Y5G7 932 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 KLK4Q9Y5K2 254 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 AP1M2Q9Y6Q5 423 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 UBR5O95071 2799 aaPredicted RBP5.05□□□□□ -1.6
SHMT1-211ENST00000618902 CNTRLQ7Z7A1 2325 aa5.05□□□□□ -1.6
SHMT1-211ENST00000618902 SDK2Q58EX2 2172 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 ADAMTS20P59510 1910 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 SLC9B1P1A6NJY1 282 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 EIF4E1BA6NMX2 242 aaKnown RBP5.04□□□□□ -1.6
SHMT1-211ENST00000618902 C2orf74A8MZ97 194 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 TARM1B6A8C7 271 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 E7ENX8 843 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 H0YJX3 145 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 FCHO1O14526 889 aa5.04□□□□□ -1.6
SHMT1-211ENST00000618902 ATXN7O15265 892 aaPredicted RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms