RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 CEP78Q5JTW2 689 aa8.21□□□□□ -1.1
GPC6-202ENST00000617456 AARS2Q5JTZ9 985 aaKnown RBP8.21□□□□□ -1.1
GPC6-202ENST00000617456 RNASEH2BQ5TBB1 312 aaKnown RBP8.21□□□□□ -1.1
GPC6-202ENST00000617456 SEL1L2Q5TEA6 688 aa8.21□□□□□ -1.1
GPC6-202ENST00000617456 IGFL3Q6UXB1 125 aa8.21□□□□□ -1.1
GPC6-202ENST00000617456 TBC1D21Q8IYX1 336 aa8.21□□□□□ -1.1
GPC6-202ENST00000617456 LILRA3Q8N6C8 439 aaPredicted RBP8.21□□□□□ -1.1
GPC6-202ENST00000617456 GRHL3Q8TE85 626 aa8.21□□□□□ -1.1
GPC6-202ENST00000617456 DENND1AQ8TEH3 1009 aa8.21□□□□□ -1.1
GPC6-202ENST00000617456 LCN9Q8WX39 176 aa8.21□□□□□ -1.1
GPC6-202ENST00000617456 TFGQ92734 400 aaPredicted RBP8.21□□□□□ -1.1
GPC6-202ENST00000617456 RELTQ969Z4 430 aa8.21□□□□□ -1.1
GPC6-202ENST00000617456 CEP19Q96LK0 163 aa8.21□□□□□ -1.1
GPC6-202ENST00000617456 IP6K3Q96PC2 410 aa8.21□□□□□ -1.1
GPC6-202ENST00000617456 GBP5Q96PP8 586 aa8.21□□□□□ -1.1
GPC6-202ENST00000617456 WDR77Q9BQA1 342 aaPredicted RBP8.21□□□□□ -1.1
GPC6-202ENST00000617456 TMEM121Q9BTD3 319 aa8.21□□□□□ -1.1
GPC6-202ENST00000617456 DHRS4Q9BTZ2 278 aa8.21□□□□□ -1.1
GPC6-202ENST00000617456 TSSK1BQ9BXA7 367 aa8.21□□□□□ -1.1
GPC6-202ENST00000617456 SRMSQ9H3Y6 488 aa8.21□□□□□ -1.1
GPC6-202ENST00000617456 RUBCNLQ9H714 662 aa8.21□□□□□ -1.1
GPC6-202ENST00000617456 C10orf88Q9H8K7 445 aa8.21□□□□□ -1.1
GPC6-202ENST00000617456 EURLQ9NYK6 297 aa8.21□□□□□ -1.1
GPC6-202ENST00000617456 PAK5Q9P286 719 aa8.21□□□□□ -1.1
GPC6-202ENST00000617456 IFT80Q9P2H3 777 aaPredicted RBP8.21□□□□□ -1.1
GPC6-202ENST00000617456 COPG2Q9UBF2 871 aa8.21□□□□□ -1.1
GPC6-202ENST00000617456 NDOR1Q9UHB4 597 aa8.21□□□□□ -1.1
GPC6-202ENST00000617456 ZNF180Q9UJW8 692 aa8.21□□□□□ -1.1
GPC6-202ENST00000617456 GRID1Q9ULK0 1009 aa8.21□□□□□ -1.1
GPC6-202ENST00000617456 L3MBTL1Q9Y468 752 aa8.21□□□□□ -1.1
GPC6-202ENST00000617456 ZFHX3Q15911 3703 aa8.21□□□□□ -1.1
GPC6-202ENST00000617456 CELSR1Q9NYQ6 3014 aa8.21□□□□□ -1.1
GPC6-202ENST00000617456 TRIM64A6NGJ6 449 aa8.2□□□□□ -1.1
GPC6-202ENST00000617456 TRIM64BA6NI03 449 aa8.2□□□□□ -1.1
GPC6-202ENST00000617456 FAM47E-STBD1D6RA91 191 aa8.2□□□□□ -1.1
GPC6-202ENST00000617456 BTN3A3O00478 584 aa8.2□□□□□ -1.1
GPC6-202ENST00000617456 BTN3A1O00481 513 aa8.2□□□□□ -1.1
GPC6-202ENST00000617456 KPNA5O15131 536 aa8.2□□□□□ -1.1
GPC6-202ENST00000617456 URI1O94763 535 aaPredicted RBP8.2□□□□□ -1.1
GPC6-202ENST00000617456 SYF2O95926 243 aaKnown RBP8.2□□□□□ -1.1
GPC6-202ENST00000617456 IGHEP01854 428 aa8.2□□□□□ -1.1
GPC6-202ENST00000617456 S100BP04271 92 aaPredicted RBP8.2□□□□□ -1.1
GPC6-202ENST00000617456 RPN2P04844 631 aa8.2□□□□□ -1.1
GPC6-202ENST00000617456 ACADLP28330 430 aa8.2□□□□□ -1.1
GPC6-202ENST00000617456 PRDX3P30048 256 aaKnown RBP8.2□□□□□ -1.1
GPC6-202ENST00000617456 SHMT2P34897 504 aa8.2□□□□□ -1.1
GPC6-202ENST00000617456 CBX5P45973 191 aa8.2□□□□□ -1.1
GPC6-202ENST00000617456 RAC1P63000 192 aa8.2□□□□□ -1.1
GPC6-202ENST00000617456 GALNT1Q10472 559 aaPredicted RBP8.2□□□□□ -1.1
GPC6-202ENST00000617456 CDC16Q13042 620 aa8.2□□□□□ -1.1
GPC6-202ENST00000617456 SEMA3AQ14563 771 aa8.2□□□□□ -1.1
GPC6-202ENST00000617456 ZXDCQ2QGD7 858 aaPredicted RBP8.2□□□□□ -1.1
GPC6-202ENST00000617456 DEFB110Q30KQ9 67 aa8.2□□□□□ -1.1
GPC6-202ENST00000617456 C10orf62Q5T681 223 aaPredicted RBP8.2□□□□□ -1.1
GPC6-202ENST00000617456 MEI1Q5TIA1 1274 aa8.2□□□□□ -1.1
GPC6-202ENST00000617456 ZNF385CQ66K41 422 aaPredicted RBP8.2□□□□□ -1.1
GPC6-202ENST00000617456 OR52E8Q6IFG1 317 aa8.2□□□□□ -1.1
GPC6-202ENST00000617456 AFTPHQ6ULP2 937 aa8.2□□□□□ -1.1
GPC6-202ENST00000617456 CDHR3Q6ZTQ4 885 aa8.2□□□□□ -1.1
GPC6-202ENST00000617456 TAS2R42Q7RTR8 314 aa8.2□□□□□ -1.1
GPC6-202ENST00000617456 PPP1R32Q7Z5V6 425 aa8.2□□□□□ -1.1
GPC6-202ENST00000617456 AMIGO1Q86WK6 493 aa8.2□□□□□ -1.1
GPC6-202ENST00000617456 SLC13A5Q86YT5 568 aaPredicted RBP8.2□□□□□ -1.1
GPC6-202ENST00000617456 SCUBE1Q8IWY4 988 aa8.2□□□□□ -1.1
GPC6-202ENST00000617456 GPR135Q8IZ08 494 aa8.2□□□□□ -1.1
GPC6-202ENST00000617456 MPP5Q8N3R9 675 aa8.2□□□□□ -1.1
GPC6-202ENST00000617456 DNAAF3Q8N9W5 541 aa8.2□□□□□ -1.1
GPC6-202ENST00000617456 OR7G1Q8NGA0 311 aa8.2□□□□□ -1.1
GPC6-202ENST00000617456 OR4L1Q8NH43 312 aa8.2□□□□□ -1.1
GPC6-202ENST00000617456 OR5K2Q8NHB8 316 aa8.2□□□□□ -1.1
GPC6-202ENST00000617456 ANGPTL6Q8NI99 470 aa8.2□□□□□ -1.1
GPC6-202ENST00000617456 DNAJB14Q8TBM8 379 aa8.2□□□□□ -1.1
GPC6-202ENST00000617456 ASZ1Q8WWH4 475 aa8.2□□□□□ -1.1
GPC6-202ENST00000617456 DNAJC1Q96KC8 554 aaKnown RBP8.2□□□□□ -1.1
GPC6-202ENST00000617456 FERD3LQ96RJ6 166 aa8.2□□□□□ -1.1
GPC6-202ENST00000617456 APOL2Q9BQE5 337 aa8.2□□□□□ -1.1
GPC6-202ENST00000617456 HAUS8Q9BT25 410 aa8.2□□□□□ -1.1
GPC6-202ENST00000617456 CARD6Q9BX69 1037 aa8.2□□□□□ -1.1
GPC6-202ENST00000617456 SPRTNQ9H040 489 aaPredicted RBP8.2□□□□□ -1.1
GPC6-202ENST00000617456 XKR8Q9H6D3 395 aa8.2□□□□□ -1.1
GPC6-202ENST00000617456 PRM3Q9NNZ6 103 aa8.2□□□□□ -1.1
GPC6-202ENST00000617456 ATP13A2Q9NQ11 1180 aa8.2□□□□□ -1.1
GPC6-202ENST00000617456 EIF2B3Q9NR50 452 aaKnown RBP8.2□□□□□ -1.1
GPC6-202ENST00000617456 FBXL4Q9UKA2 621 aa8.2□□□□□ -1.1
GPC6-202ENST00000617456 CDYLQ9Y232 598 aa8.2□□□□□ -1.1
GPC6-202ENST00000617456 GPC6Q9Y625 555 aaPredicted RBP8.2□□□□□ -1.1
GPC6-202ENST00000617456 AP1M2Q9Y6Q5 423 aa8.2□□□□□ -1.1
GPC6-202ENST00000617456 PDZD2O15018 2839 aa8.2□□□□□ -1.1
GPC6-202ENST00000617456 FER1L5A0AVI2 2057 aa8.19□□□□□ -1.1
GPC6-202ENST00000617456 A0A0J9YVX5 310 aa8.19□□□□□ -1.1
GPC6-202ENST00000617456 A0A1B0GUH1 482 aa8.19□□□□□ -1.1
GPC6-202ENST00000617456 SLC5A10A0PJK1 596 aa8.19□□□□□ -1.1
GPC6-202ENST00000617456 E7EVH7 732 aa8.19□□□□□ -1.1
GPC6-202ENST00000617456 CNOT3O75175 753 aaKnown RBP8.19□□□□□ -1.1
GPC6-202ENST00000617456 OR2B3O76000 313 aa8.19□□□□□ -1.1
GPC6-202ENST00000617456 WFS1O76024 890 aa8.19□□□□□ -1.1
GPC6-202ENST00000617456 FTCDO95954 541 aa8.19□□□□□ -1.1
GPC6-202ENST00000617456 EDN3P14138 238 aa8.19□□□□□ -1.1
GPC6-202ENST00000617456 ZNF16P17020 682 aaPredicted RBP8.19□□□□□ -1.1
GPC6-202ENST00000617456 CFL1P23528 166 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms