RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 LINC00854A0A1B0GVQ3 168 aa14.01□□□□□ -0.17
SHROOM1-208ENST00000617339 TRIM64BA6NI03 449 aa14.01□□□□□ -0.17
SHROOM1-208ENST00000617339 SLC9A3R1O14745 358 aaPredicted RBP14.01□□□□□ -0.17
SHROOM1-208ENST00000617339 UGT2B11O75310 529 aa14.01□□□□□ -0.17
SHROOM1-208ENST00000617339 ALOX12P18054 663 aa14.01□□□□□ -0.17
SHROOM1-208ENST00000617339 CD40LGP29965 261 aa14.01□□□□□ -0.17
SHROOM1-208ENST00000617339 TIE1P35590 1138 aa14.01□□□□□ -0.17
SHROOM1-208ENST00000617339 TUBA3CQ13748 450 aa14.01□□□□□ -0.17
SHROOM1-208ENST00000617339 CLPPQ16740 277 aaPredicted RBP14.01□□□□□ -0.17
SHROOM1-208ENST00000617339 TMEM240Q5SV17 173 aa14.01□□□□□ -0.17
SHROOM1-208ENST00000617339 NUDT18Q6ZVK8 323 aa14.01□□□□□ -0.17
SHROOM1-208ENST00000617339 ADGRD2Q7Z7M1 963 aa14.01□□□□□ -0.17
SHROOM1-208ENST00000617339 SLC44A2Q8IWA5 706 aaPredicted RBP14.01□□□□□ -0.17
SHROOM1-208ENST00000617339 CHDHQ8NE62 594 aaPredicted RBP14.01□□□□□ -0.17
SHROOM1-208ENST00000617339 FAM83FQ8NEG4 500 aaPredicted RBP14.01□□□□□ -0.17
SHROOM1-208ENST00000617339 RORBQ92753 470 aa14.01□□□□□ -0.17
SHROOM1-208ENST00000617339 KCTD5Q9NXV2 234 aa14.01□□□□□ -0.17
SHROOM1-208ENST00000617339 FADS2P1A8MWK0 482 aa14□□□□□ -0.17
SHROOM1-208ENST00000617339 CCNKO75909 580 aa14□□□□□ -0.17
SHROOM1-208ENST00000617339 FADS2O95864 444 aaKnown RBP14□□□□□ -0.17
SHROOM1-208ENST00000617339 HSD17B1P14061 328 aa14□□□□□ -0.17
SHROOM1-208ENST00000617339 SERPINB10P48595 397 aa14□□□□□ -0.17
SHROOM1-208ENST00000617339 HNRNPFP52597 415 aaKnown RBP14□□□□□ -0.17
SHROOM1-208ENST00000617339 CYP4F2P78329 520 aa14□□□□□ -0.17
SHROOM1-208ENST00000617339 SLC7A9P82251 487 aa14□□□□□ -0.17
SHROOM1-208ENST00000617339 FAM214AQ32MH5 1076 aa14□□□□□ -0.17
SHROOM1-208ENST00000617339 C8orf82Q6P1X6 216 aaPredicted RBP14□□□□□ -0.17
SHROOM1-208ENST00000617339 LILRA6Q6PI73 481 aa14□□□□□ -0.17
SHROOM1-208ENST00000617339 ENPP6Q6UWR7 440 aa14□□□□□ -0.17
SHROOM1-208ENST00000617339 KIAA1324Q6UXG2 1013 aaKnown RBP14□□□□□ -0.17
SHROOM1-208ENST00000617339 ZDHHC13Q8IUH4 622 aa14□□□□□ -0.17
SHROOM1-208ENST00000617339 MFSD4AQ8N468 514 aa14□□□□□ -0.17
SHROOM1-208ENST00000617339 HOXD1Q9GZZ0 328 aa14□□□□□ -0.17
SHROOM1-208ENST00000617339 ACTL8Q9H568 366 aa14□□□□□ -0.17
SHROOM1-208ENST00000617339 RMND5AQ9H871 391 aa14□□□□□ -0.17
SHROOM1-208ENST00000617339 ERVK-18Q9QC07 812 aa14□□□□□ -0.17
SHROOM1-208ENST00000617339 LAMA1P25391 3075 aa14□□□□□ -0.17
SHROOM1-208ENST00000617339 ZNF99A8MXY4 864 aaPredicted RBP14□□□□□ -0.17
SHROOM1-208ENST00000617339 MANBAO00462 879 aa14□□□□□ -0.17
SHROOM1-208ENST00000617339 SLC31A1O15431 190 aa14□□□□□ -0.17
SHROOM1-208ENST00000617339 TULP3O75386 442 aa14□□□□□ -0.17
SHROOM1-208ENST00000617339 ADH1CP00326 375 aa14□□□□□ -0.17
SHROOM1-208ENST00000617339 VAC14Q08AM6 782 aa14□□□□□ -0.17
SHROOM1-208ENST00000617339 KCNAB2Q13303 367 aa14□□□□□ -0.17
SHROOM1-208ENST00000617339 DHCR24Q15392 516 aa14□□□□□ -0.17
SHROOM1-208ENST00000617339 NDUFA5Q16718 116 aa14□□□□□ -0.17
SHROOM1-208ENST00000617339 CYP2U1Q7Z449 544 aa14□□□□□ -0.17
SHROOM1-208ENST00000617339 GALNT7Q86SF2 657 aa14□□□□□ -0.17
SHROOM1-208ENST00000617339 DTWD1Q8N5C7 304 aa14□□□□□ -0.17
SHROOM1-208ENST00000617339 LILRB4Q8NHJ6 448 aa14□□□□□ -0.17
SHROOM1-208ENST00000617339 SPPL3Q8TCT6 385 aa14□□□□□ -0.17
SHROOM1-208ENST00000617339 DPH2Q9BQC3 489 aaPredicted RBP14□□□□□ -0.17
SHROOM1-208ENST00000617339 RHNO1Q9BSD3 238 aa14□□□□□ -0.17
SHROOM1-208ENST00000617339 YTHDF1Q9BYJ9 559 aaKnown RBP14□□□□□ -0.17
SHROOM1-208ENST00000617339 ADGRE2Q9UHX3 823 aa14□□□□□ -0.17
SHROOM1-208ENST00000617339 FNDC1Q4ZHG4 1894 aaPredicted RBP14□□□□□ -0.17
SHROOM1-208ENST00000617339 TANC1Q9C0D5 1861 aa14□□□□□ -0.17
SHROOM1-208ENST00000617339 PRRT4C9JH25 899 aa14□□□□□ -0.17
SHROOM1-208ENST00000617339 KRT6AP02538 564 aa14□□□□□ -0.17
SHROOM1-208ENST00000617339 KRT6BP04259 564 aa14□□□□□ -0.17
SHROOM1-208ENST00000617339 BCKDHAP12694 445 aa14□□□□□ -0.17
SHROOM1-208ENST00000617339 JUNBP17275 347 aaPredicted RBP14□□□□□ -0.17
SHROOM1-208ENST00000617339 KRT6CP48668 564 aa14□□□□□ -0.17
SHROOM1-208ENST00000617339 PRMT9Q6P2P2 845 aa14□□□□□ -0.17
SHROOM1-208ENST00000617339 SPATA19Q7Z5L4 167 aa14□□□□□ -0.17
SHROOM1-208ENST00000617339 SREK1IP1Q8N9Q2 155 aaPredicted RBP14□□□□□ -0.17
SHROOM1-208ENST00000617339 FRS2Q8WU20 508 aa14□□□□□ -0.17
SHROOM1-208ENST00000617339 PAK1IP1Q9NWT1 392 aaPredicted RBP14□□□□□ -0.17
SHROOM1-208ENST00000617339 PMF1-BGLAPU3KQ54 211 aa14□□□□□ -0.17
SHROOM1-208ENST00000617339 LINC01553A4QN01 128 aa13.99□□□□□ -0.17
SHROOM1-208ENST00000617339 G3V2T6 193 aa13.99□□□□□ -0.17
SHROOM1-208ENST00000617339 SLC16A8O95907 504 aa13.99□□□□□ -0.17
SHROOM1-208ENST00000617339 FTH1P02794 183 aa13.99□□□□□ -0.17
SHROOM1-208ENST00000617339 PGRP06401 933 aa13.99□□□□□ -0.17
SHROOM1-208ENST00000617339 ALDH3A2P51648 485 aa13.99□□□□□ -0.17
SHROOM1-208ENST00000617339 RCAN2Q14206 197 aa13.99□□□□□ -0.17
SHROOM1-208ENST00000617339 ATAT1Q5SQI0 421 aa13.99□□□□□ -0.17
SHROOM1-208ENST00000617339 TMPRSS11BQ86T26 416 aa13.99□□□□□ -0.17
SHROOM1-208ENST00000617339 C10orf111Q8N326 155 aa13.99□□□□□ -0.17
SHROOM1-208ENST00000617339 OR2T12Q8NG77 320 aa13.99□□□□□ -0.17
SHROOM1-208ENST00000617339 MCFD2Q8NI22 146 aa13.99□□□□□ -0.17
SHROOM1-208ENST00000617339 SLC13A3Q8WWT9 602 aa13.99□□□□□ -0.17
SHROOM1-208ENST00000617339 ACPTQ9BZG2 426 aa13.99□□□□□ -0.17
SHROOM1-208ENST00000617339 TRIM39Q9HCM9 518 aa13.99□□□□□ -0.17
SHROOM1-208ENST00000617339 FAM118AQ9NWS6 357 aa13.99□□□□□ -0.17
SHROOM1-208ENST00000617339 GPRC5BQ9NZH0 403 aa13.99□□□□□ -0.17
SHROOM1-208ENST00000617339 NOTCH4Q99466 2003 aa13.99□□□□□ -0.17
SHROOM1-208ENST00000617339 CCRL2O00421 344 aa13.99□□□□□ -0.17
SHROOM1-208ENST00000617339 LILRB3O75022 631 aa13.99□□□□□ -0.17
SHROOM1-208ENST00000617339 ADH5P11766 374 aa13.99□□□□□ -0.17
SHROOM1-208ENST00000617339 S100A3P33764 101 aa13.99□□□□□ -0.17
SHROOM1-208ENST00000617339 ILF2Q12905 390 aaKnown RBP13.99□□□□□ -0.17
SHROOM1-208ENST00000617339 FAM209AQ5JX71 171 aa13.99□□□□□ -0.17
SHROOM1-208ENST00000617339 DESI1Q6ICB0 168 aa13.99□□□□□ -0.17
SHROOM1-208ENST00000617339 SULT1C3Q6IMI6 304 aa13.99□□□□□ -0.17
SHROOM1-208ENST00000617339 HACD2Q6Y1H2 254 aa13.99□□□□□ -0.17
SHROOM1-208ENST00000617339 SYT12Q8IV01 421 aa13.99□□□□□ -0.17
SHROOM1-208ENST00000617339 FAM20CQ8IXL6 584 aa13.99□□□□□ -0.17
SHROOM1-208ENST00000617339 REXO4Q9GZR2 422 aaKnown RBP13.99□□□□□ -0.17
SHROOM1-208ENST00000617339 NTN4Q9HB63 628 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms