RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 PRSS56P0CW18 603 aa16.82■□□□□ 0.28
TRAPPC3-209ENST00000616395 CD151P48509 253 aa16.82■□□□□ 0.28
TRAPPC3-209ENST00000616395 FASTKD1Q53R41 847 aaKnown RBP16.82■□□□□ 0.28
TRAPPC3-209ENST00000616395 LDLRAP1Q5SW96 308 aa16.82■□□□□ 0.28
TRAPPC3-209ENST00000616395 GPRC6AQ5T6X5 926 aa16.82■□□□□ 0.28
TRAPPC3-209ENST00000616395 AFTPHQ6ULP2 937 aa16.82■□□□□ 0.28
TRAPPC3-209ENST00000616395 KIRREL2Q6UWL6 708 aa16.82■□□□□ 0.28
TRAPPC3-209ENST00000616395 DET1Q7L5Y6 550 aa16.82■□□□□ 0.28
TRAPPC3-209ENST00000616395 CPLX4Q7Z7G2 160 aa16.82■□□□□ 0.28
TRAPPC3-209ENST00000616395 ZNF655Q8N720 491 aaPredicted RBP16.82■□□□□ 0.28
TRAPPC3-209ENST00000616395 DDHD1Q8NEL9 900 aa16.82■□□□□ 0.28
TRAPPC3-209ENST00000616395 MGARPQ8TDB4 240 aa16.82■□□□□ 0.28
TRAPPC3-209ENST00000616395 THOC3Q96J01 351 aaKnown RBP16.82■□□□□ 0.28
TRAPPC3-209ENST00000616395 TXLNGQ9NUQ3 528 aa16.82■□□□□ 0.28
TRAPPC3-209ENST00000616395 NLE1Q9NVX2 485 aaPredicted RBP16.82■□□□□ 0.28
TRAPPC3-209ENST00000616395 FBXO5Q9UKT4 447 aa16.82■□□□□ 0.28
TRAPPC3-209ENST00000616395 HS3ST3B1Q9Y662 390 aa16.82■□□□□ 0.28
TRAPPC3-209ENST00000616395 ANKHD1Q8IWZ3 2542 aaKnown RBP16.82■□□□□ 0.28
TRAPPC3-209ENST00000616395 ZSCAN9O15535 394 aaPredicted RBP16.81■□□□□ 0.28
TRAPPC3-209ENST00000616395 APOA4P06727 396 aa16.81■□□□□ 0.28
TRAPPC3-209ENST00000616395 GSTA1P08263 222 aa16.81■□□□□ 0.28
TRAPPC3-209ENST00000616395 CD99P14209 185 aa16.81■□□□□ 0.28
TRAPPC3-209ENST00000616395 OGNP20774 298 aaKnown RBP16.81■□□□□ 0.28
TRAPPC3-209ENST00000616395 MST1P26927 711 aa16.81■□□□□ 0.28
TRAPPC3-209ENST00000616395 ACVR1Q04771 509 aa16.81■□□□□ 0.28
TRAPPC3-209ENST00000616395 RNF187Q5TA31 235 aaPredicted RBP16.81■□□□□ 0.28
TRAPPC3-209ENST00000616395 ZDHHC20Q5W0Z9 365 aa16.81■□□□□ 0.28
TRAPPC3-209ENST00000616395 ZNF470Q6ECI4 717 aa16.81■□□□□ 0.28
TRAPPC3-209ENST00000616395 BANPQ8N9N5 519 aa16.81■□□□□ 0.28
TRAPPC3-209ENST00000616395 OR2L2Q8NH16 312 aa16.81■□□□□ 0.28
TRAPPC3-209ENST00000616395 MZB1Q8WU39 189 aa16.81■□□□□ 0.28
TRAPPC3-209ENST00000616395 CHMP6Q96FZ7 201 aa16.81■□□□□ 0.28
TRAPPC3-209ENST00000616395 LMF1Q96S06 567 aa16.81■□□□□ 0.28
TRAPPC3-209ENST00000616395 TCF12Q99081 682 aa16.81■□□□□ 0.28
TRAPPC3-209ENST00000616395 CCDC68Q9H2F9 335 aa16.81■□□□□ 0.28
TRAPPC3-209ENST00000616395 CCDC134Q9H6E4 229 aa16.81■□□□□ 0.28
TRAPPC3-209ENST00000616395 SEC14L3Q9UDX4 400 aa16.81■□□□□ 0.28
TRAPPC3-209ENST00000616395 SPG11Q96JI7 2443 aa16.81■□□□□ 0.28
TRAPPC3-209ENST00000616395 TYROBPO43914 113 aa16.8■□□□□ 0.28
TRAPPC3-209ENST00000616395 SRP72O76094 671 aaKnown RBP16.8■□□□□ 0.28
TRAPPC3-209ENST00000616395 AGAP20933 346 aa16.8■□□□□ 0.28
TRAPPC3-209ENST00000616395 CRABP2P29373 138 aa16.8■□□□□ 0.28
TRAPPC3-209ENST00000616395 AKT1P31749 480 aa16.8■□□□□ 0.28
TRAPPC3-209ENST00000616395 CRHR1P34998 444 aa16.8■□□□□ 0.28
TRAPPC3-209ENST00000616395 CCNFP41002 786 aa16.8■□□□□ 0.28
TRAPPC3-209ENST00000616395 GABRA4P48169 554 aa16.8■□□□□ 0.28
TRAPPC3-209ENST00000616395 CDKN1CP49918 316 aaPredicted RBP16.8■□□□□ 0.28
TRAPPC3-209ENST00000616395 ART1P52961 327 aa16.8■□□□□ 0.28
TRAPPC3-209ENST00000616395 ARG2P78540 354 aa16.8■□□□□ 0.28
TRAPPC3-209ENST00000616395 XIAPP98170 497 aa16.8■□□□□ 0.28
TRAPPC3-209ENST00000616395 DBN1Q16643 649 aa16.8■□□□□ 0.28
TRAPPC3-209ENST00000616395 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.8■□□□□ 0.28
TRAPPC3-209ENST00000616395 RAPH1Q70E73 1250 aa16.8■□□□□ 0.28
TRAPPC3-209ENST00000616395 TRIM73Q86UV7 250 aa16.8■□□□□ 0.28
TRAPPC3-209ENST00000616395 LILRA3Q8N6C8 439 aaPredicted RBP16.8■□□□□ 0.28
TRAPPC3-209ENST00000616395 C19orf47Q8N9M1 422 aaKnown RBP16.8■□□□□ 0.28
TRAPPC3-209ENST00000616395 C2CD4AQ8NCU7 369 aaPredicted RBP16.8■□□□□ 0.28
TRAPPC3-209ENST00000616395 ZNF398Q8TD17 642 aa16.8■□□□□ 0.28
TRAPPC3-209ENST00000616395 LRRC8CQ8TDW0 803 aa16.8■□□□□ 0.28
TRAPPC3-209ENST00000616395 HDAC10Q969S8 669 aa16.8■□□□□ 0.28
TRAPPC3-209ENST00000616395 MAGEB18Q96M61 343 aa16.8■□□□□ 0.28
TRAPPC3-209ENST00000616395 TMUB1Q9BVT8 246 aa16.8■□□□□ 0.28
TRAPPC3-209ENST00000616395 ASB8Q9H765 288 aa16.8■□□□□ 0.28
TRAPPC3-209ENST00000616395 CATSPERZQ9NTU4 200 aa16.8■□□□□ 0.28
TRAPPC3-209ENST00000616395 INTS10Q9NVR2 710 aaKnown RBP16.8■□□□□ 0.28
TRAPPC3-209ENST00000616395 ACTR10Q9NZ32 417 aa16.8■□□□□ 0.28
TRAPPC3-209ENST00000616395 DOCK10Q96BY6 2186 aa16.8■□□□□ 0.28
TRAPPC3-209ENST00000616395 C2orf74A8MZ97 194 aa16.79■□□□□ 0.28
TRAPPC3-209ENST00000616395 GOLGA8RI6L899 631 aa16.79■□□□□ 0.28
TRAPPC3-209ENST00000616395 NDUFAB1O14561 156 aa16.79■□□□□ 0.28
TRAPPC3-209ENST00000616395 PIAS1O75925 651 aa16.79■□□□□ 0.28
TRAPPC3-209ENST00000616395 VIMP08670 466 aaKnown RBP16.79■□□□□ 0.28
TRAPPC3-209ENST00000616395 COL6A2P12110 1019 aa16.79■□□□□ 0.28
TRAPPC3-209ENST00000616395 MC4RP32245 332 aa16.79■□□□□ 0.28
TRAPPC3-209ENST00000616395 SMSP52788 366 aa16.79■□□□□ 0.28
TRAPPC3-209ENST00000616395 POU4F1Q01851 419 aa16.79■□□□□ 0.28
TRAPPC3-209ENST00000616395 ITGA9Q13797 1035 aa16.79■□□□□ 0.28
TRAPPC3-209ENST00000616395 BMPR2Q13873 1038 aa16.79■□□□□ 0.28
TRAPPC3-209ENST00000616395 USP10Q14694 798 aaKnown RBP16.79■□□□□ 0.28
TRAPPC3-209ENST00000616395 ZIC1Q15915 447 aa16.79■□□□□ 0.28
TRAPPC3-209ENST00000616395 INAQ16352 499 aa16.79■□□□□ 0.28
TRAPPC3-209ENST00000616395 TTC19Q6DKK2 380 aaPredicted RBP16.79■□□□□ 0.28
TRAPPC3-209ENST00000616395 ZNF771Q7L3S4 317 aaPredicted RBP16.79■□□□□ 0.28
TRAPPC3-209ENST00000616395 CCDC63Q8NA47 563 aa16.79■□□□□ 0.28
TRAPPC3-209ENST00000616395 OR4L1Q8NH43 312 aa16.79■□□□□ 0.28
TRAPPC3-209ENST00000616395 BCAS4Q8TDM0 211 aa16.79■□□□□ 0.28
TRAPPC3-209ENST00000616395 ZNF778Q96MU6 729 aa16.79■□□□□ 0.28
TRAPPC3-209ENST00000616395 FERD3LQ96RJ6 166 aa16.79■□□□□ 0.28
TRAPPC3-209ENST00000616395 SPOCK3Q9BQ16 436 aa16.79■□□□□ 0.28
TRAPPC3-209ENST00000616395 NDC1Q9BTX1 674 aa16.79■□□□□ 0.28
TRAPPC3-209ENST00000616395 XKR8Q9H6D3 395 aa16.79■□□□□ 0.28
TRAPPC3-209ENST00000616395 SMOXQ9NWM0 555 aa16.79■□□□□ 0.28
TRAPPC3-209ENST00000616395 PLA2G3Q9NZ20 509 aa16.79■□□□□ 0.28
TRAPPC3-209ENST00000616395 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.79■□□□□ 0.28
TRAPPC3-209ENST00000616395 HEBP2Q9Y5Z4 205 aa16.79■□□□□ 0.28
TRAPPC3-209ENST00000616395 OR51F1A6NGY5 319 aa16.78■□□□□ 0.28
TRAPPC3-209ENST00000616395 CD3EAPO15446 510 aaKnown RBP16.78■□□□□ 0.28
TRAPPC3-209ENST00000616395 CLDN14O95500 239 aa16.78■□□□□ 0.28
TRAPPC3-209ENST00000616395 STMN1P16949 149 aa16.78■□□□□ 0.28
TRAPPC3-209ENST00000616395 MSH3P20585 1137 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms