RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 RAB8BQ92930 207 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 THG1LQ9NWX6 298 aaKnown RBP5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 EBF1Q9UH73 591 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 PCDHA9Q9Y5H5 950 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 FADS2P1A8MWK0 482 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 ZNF99A8MXY4 864 aaPredicted RBP5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 PAK4O96013 591 aaPredicted RBP5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 KELP23276 732 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 CTSOP43234 321 aaPredicted RBP5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 ZNF763Q0D2J5 394 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 PMS2P3Q13401 168 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 RAPSNQ13702 412 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 INAQ16352 499 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 SDE2Q6IQ49 451 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 DEF8Q6ZN54 512 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 SMYD1Q8NB12 490 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 TRMT2BQ96GJ1 504 aaKnown RBP5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 LRIG1Q96JA1 1093 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 IL17FQ96PD4 163 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 UHRF1Q96T88 793 aaPredicted RBP5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 PRRG3Q9BZD7 231 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 CAPN10Q9HC96 672 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 KLHL3Q9UH77 587 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 GMEB2Q9UKD1 530 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 HS3ST2Q9Y278 367 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 COQ6Q9Y2Z9 468 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 PRSS21Q9Y6M0 314 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 TRBC2A0A5B9 178 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 SLC31A1O15431 190 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 TBX1O43435 398 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 TGM5O43548 720 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 BCAS1O75363 584 aaPredicted RBP5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 ABLIM3O94929 683 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 AP2A2O94973 939 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 ALDH3B2P48448 385 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 RPP38P78345 283 aaKnown RBP5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 ALDH6A1Q02252 535 aaKnown RBP5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 KCNC4Q03721 635 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 GRM2Q14416 872 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 SLC36A3Q495N2 470 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 GCNT6Q5T4J0 391 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 C10orf62Q5T681 223 aaPredicted RBP5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 KIAA1614Q5VZ46 1190 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 CCSAPQ6IQ19 270 aaPredicted RBP5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 FAM43BQ6ZT52 329 aaPredicted RBP5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 GRASPQ7Z6J2 395 aaPredicted RBP5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 FAM86B1Q8N7N1 296 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 SRFBP1Q8NEF9 429 aaKnown RBP5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 ZNF607Q96SK3 696 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 NAA50Q9GZZ1 169 aaKnown RBP5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 IKZF5Q9H5V7 419 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 ZDHHC4Q9NPG8 344 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 OGDHLQ9ULD0 1010 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 CLEC4EQ9ULY5 219 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 PCDHGB5Q9Y5G0 923 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 H3BNC9 293 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 MYL12BO14950 172 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 MMP20O60882 483 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 ATP6V1G1O75348 118 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 ALPLP05186 524 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 RHOP08100 348 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 IDSP22304 550 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 NTSP30990 170 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 VIPR1P32241 457 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 BUD31P41223 144 aaPredicted RBP5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 CLCNKAP51800 687 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 DEFB103AP81534 67 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 TGM3Q08188 693 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 ZNF630Q2M218 657 aaPredicted RBP5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 LHX8Q68G74 356 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 ALG1LQ6GMV1 187 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 OR2T11Q8NH01 316 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 VANGL1Q8TAA9 524 aaPredicted RBP5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 CNIH3Q8TBE1 160 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 FNDC8Q8TC99 324 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 TEFMQ96QE5 360 aaKnown RBP5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 DCSTAMPQ9H295 470 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 DCAF13Q9NV06 445 aaKnown RBP5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 FAM118AQ9NWS6 357 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 TLN1Q9Y490 2541 aaKnown RBP5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 KRT87PA6NCN2 255 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 CTSAP10619 480 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 HSD3B1P14060 373 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 HSD3B2P26439 372 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 SOX6P35712 828 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 SGSHP51688 502 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 RPS13P62277 151 aaKnown RBP5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 NPRL3Q12980 569 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 TEAD2Q15562 447 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 CTSL3PQ5NE16 218 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 CPZQ66K79 652 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 ZNF683Q8IZ20 524 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 METTL25Q8N6Q8 603 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 SLCO4A1Q96BD0 722 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 LGALS12Q96DT0 336 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 IL21Q9HBE4 155 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 RDH14Q9HBH5 336 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 PHF24Q9UPV7 400 aa5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 CFAP20Q9Y6A4 193 aaKnown RBP5.45□□□□□ -1.54
SYNCRIP-204ENST00000616122 H7BY64 318 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms