RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 FBXO32Q969P5 355 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 APIPQ96GX9 242 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 NIPSNAP1Q9BPW8 284 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 TM9SF3Q9HD45 589 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 ARL15Q9NXU5 204 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 SH3BP4Q9P0V3 963 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 PARP14Q460N5 1801 aa12.75□□□□□ -0.37
MSH6-214ENST00000616033 GLTPD2A6NH11 291 aa12.74□□□□□ -0.37
MSH6-214ENST00000616033 RFXAPO00287 272 aa12.74□□□□□ -0.37
MSH6-214ENST00000616033 ERN1O75460 977 aaKnown RBP12.74□□□□□ -0.37
MSH6-214ENST00000616033 COX7A2P14406 83 aa12.74□□□□□ -0.37
MSH6-214ENST00000616033 JUNDP17535 347 aa12.74□□□□□ -0.37
MSH6-214ENST00000616033 HNF4AP41235 474 aa12.74□□□□□ -0.37
MSH6-214ENST00000616033 CRATP43155 626 aa12.74□□□□□ -0.37
MSH6-214ENST00000616033 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.74□□□□□ -0.37
MSH6-214ENST00000616033 PDZK1Q5T2W1 519 aa12.74□□□□□ -0.37
MSH6-214ENST00000616033 SYT12Q8IV01 421 aa12.74□□□□□ -0.37
MSH6-214ENST00000616033 LRRC20Q8TCA0 184 aa12.74□□□□□ -0.37
MSH6-214ENST00000616033 ASIC4Q96FT7 647 aa12.74□□□□□ -0.37
MSH6-214ENST00000616033 REV1Q9UBZ9 1251 aa12.74□□□□□ -0.37
MSH6-214ENST00000616033 PCDHGB1Q9Y5G3 927 aa12.74□□□□□ -0.37
MSH6-214ENST00000616033 RAI2Q9Y5P3 530 aa12.74□□□□□ -0.37
MSH6-214ENST00000616033 RETP07949 1114 aa12.74□□□□□ -0.37
MSH6-214ENST00000616033 TTPAP49638 278 aa12.74□□□□□ -0.37
MSH6-214ENST00000616033 HSPA14Q0VDF9 509 aa12.74□□□□□ -0.37
MSH6-214ENST00000616033 KIAA0040Q15053 153 aa12.74□□□□□ -0.37
MSH6-214ENST00000616033 IGSF11Q5DX21 431 aa12.74□□□□□ -0.37
MSH6-214ENST00000616033 C10orf62Q5T681 223 aaPredicted RBP12.74□□□□□ -0.37
MSH6-214ENST00000616033 USP50Q70EL3 339 aaPredicted RBP12.74□□□□□ -0.37
MSH6-214ENST00000616033 EIF3MQ7L2H7 374 aaKnown RBP12.74□□□□□ -0.37
MSH6-214ENST00000616033 UMODL1-AS1Q8N2C9 162 aa12.74□□□□□ -0.37
MSH6-214ENST00000616033 B3GNT7Q8NFL0 401 aa12.74□□□□□ -0.37
MSH6-214ENST00000616033 NELL1Q92832 810 aa12.74□□□□□ -0.37
MSH6-214ENST00000616033 DIRAS2Q96HU8 199 aa12.74□□□□□ -0.37
MSH6-214ENST00000616033 CCDC115Q96NT0 180 aa12.74□□□□□ -0.37
MSH6-214ENST00000616033 CPPED1Q9BRF8 314 aaPredicted RBP12.74□□□□□ -0.37
MSH6-214ENST00000616033 NMRK2Q9NPI5 230 aa12.74□□□□□ -0.37
MSH6-214ENST00000616033 TLR8Q9NR97 1041 aaKnown RBP12.74□□□□□ -0.37
MSH6-214ENST00000616033 PPT2Q9UMR5 302 aa12.74□□□□□ -0.37
MSH6-214ENST00000616033 HSPB11Q9Y547 144 aa12.74□□□□□ -0.37
MSH6-214ENST00000616033 M0QZ92 97 aa12.74□□□□□ -0.37
MSH6-214ENST00000616033 TAPBPO15533 448 aa12.74□□□□□ -0.37
MSH6-214ENST00000616033 CCNDBP1O95273 360 aa12.74□□□□□ -0.37
MSH6-214ENST00000616033 AKR1D1P51857 326 aa12.74□□□□□ -0.37
MSH6-214ENST00000616033 SERINC3Q13530 473 aa12.74□□□□□ -0.37
MSH6-214ENST00000616033 SPDYE7PQ495Y7 208 aa12.74□□□□□ -0.37
MSH6-214ENST00000616033 ATXN7L2Q5T6C5 722 aaPredicted RBP12.74□□□□□ -0.37
MSH6-214ENST00000616033 AMIGO1Q86WK6 493 aa12.74□□□□□ -0.37
MSH6-214ENST00000616033 TIGD4Q8IY51 512 aa12.74□□□□□ -0.37
MSH6-214ENST00000616033 ENKURQ8TC29 256 aa12.74□□□□□ -0.37
MSH6-214ENST00000616033 CHAC2Q8WUX2 184 aa12.74□□□□□ -0.37
MSH6-214ENST00000616033 SH3KBP1Q96B97 665 aa12.74□□□□□ -0.37
MSH6-214ENST00000616033 MTERF3Q96E29 417 aa12.74□□□□□ -0.37
MSH6-214ENST00000616033 ACPTQ9BZG2 426 aa12.74□□□□□ -0.37
MSH6-214ENST00000616033 ASB8Q9H765 288 aa12.74□□□□□ -0.37
MSH6-214ENST00000616033 CCSER2Q9H7U1 834 aa12.74□□□□□ -0.37
MSH6-214ENST00000616033 NLE1Q9NVX2 485 aaPredicted RBP12.74□□□□□ -0.37
MSH6-214ENST00000616033 USP34Q70CQ2 3546 aa12.74□□□□□ -0.37
MSH6-214ENST00000616033 CLCA1A8K7I4 914 aa12.73□□□□□ -0.37
MSH6-214ENST00000616033 I3L521 148 aa12.73□□□□□ -0.37
MSH6-214ENST00000616033 MANBAO00462 879 aa12.73□□□□□ -0.37
MSH6-214ENST00000616033 FCER2P06734 321 aa12.73□□□□□ -0.37
MSH6-214ENST00000616033 PSKH1P11801 424 aa12.73□□□□□ -0.37
MSH6-214ENST00000616033 RPS19P39019 145 aaKnown RBP12.73□□□□□ -0.37
MSH6-214ENST00000616033 KIR3DL1P43629 444 aa12.73□□□□□ -0.37
MSH6-214ENST00000616033 SUOXP51687 545 aa12.73□□□□□ -0.37
MSH6-214ENST00000616033 KRR1Q13601 381 aaKnown RBP12.73□□□□□ -0.37
MSH6-214ENST00000616033 KEAP1Q14145 624 aa12.73□□□□□ -0.37
MSH6-214ENST00000616033 DSC3Q14574 896 aa12.73□□□□□ -0.37
MSH6-214ENST00000616033 STK40Q8N2I9 435 aa12.73□□□□□ -0.37
MSH6-214ENST00000616033 OR9Q1Q8NGQ5 310 aa12.73□□□□□ -0.37
MSH6-214ENST00000616033 MSANTD3Q96H12 275 aa12.73□□□□□ -0.37
MSH6-214ENST00000616033 SDHCQ99643 169 aaPredicted RBP12.73□□□□□ -0.37
MSH6-214ENST00000616033 TMEM121BQ9BXQ6 578 aaPredicted RBP12.73□□□□□ -0.37
MSH6-214ENST00000616033 DYRK4Q9NR20 520 aa12.73□□□□□ -0.37
MSH6-214ENST00000616033 DNAJC27Q9NZQ0 273 aa12.73□□□□□ -0.37
MSH6-214ENST00000616033 CLEC2DQ9UHP7 191 aa12.73□□□□□ -0.37
MSH6-214ENST00000616033 SLITRK5O94991 958 aa12.73□□□□□ -0.37
MSH6-214ENST00000616033 TSPAN19P0C672 248 aa12.73□□□□□ -0.37
MSH6-214ENST00000616033 CSTF3Q12996 717 aaKnown RBP12.73□□□□□ -0.37
MSH6-214ENST00000616033 LEXMQ3ZCV2 418 aa12.73□□□□□ -0.37
MSH6-214ENST00000616033 SBSNQ6UWP8 590 aa12.73□□□□□ -0.37
MSH6-214ENST00000616033 AGMOQ6ZNB7 445 aa12.73□□□□□ -0.37
MSH6-214ENST00000616033 NOXA1Q86UR1 476 aa12.73□□□□□ -0.37
MSH6-214ENST00000616033 OR10G2Q8NGC3 310 aa12.73□□□□□ -0.37
MSH6-214ENST00000616033 IPCEF1Q8WWN9 437 aaPredicted RBP12.73□□□□□ -0.37
MSH6-214ENST00000616033 OR2A14Q96R47 310 aa12.73□□□□□ -0.37
MSH6-214ENST00000616033 FAM126AQ9BYI3 521 aaPredicted RBP12.73□□□□□ -0.37
MSH6-214ENST00000616033 UCK2Q9BZX2 261 aa12.73□□□□□ -0.37
MSH6-214ENST00000616033 SMURF1Q9HCE7 757 aa12.73□□□□□ -0.37
MSH6-214ENST00000616033 NOD1Q9Y239 953 aa12.73□□□□□ -0.37
MSH6-214ENST00000616033 PRSS21Q9Y6M0 314 aa12.73□□□□□ -0.37
MSH6-214ENST00000616033 PIKFYVEQ9Y2I7 2098 aa12.73□□□□□ -0.37
MSH6-214ENST00000616033 A0A0G2JMZ2 1700 aa12.73□□□□□ -0.37
MSH6-214ENST00000616033 LRRC37A2A6NM11 1700 aa12.73□□□□□ -0.37
MSH6-214ENST00000616033 DOCK1Q14185 1865 aa12.73□□□□□ -0.37
MSH6-214ENST00000616033 NUMA1Q14980 2115 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 SUV39H1O43463 412 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 CYP2A7P20853 494 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 ACVR2AP27037 513 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms