RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 ABLIM3O94929 683 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 METTL18O95568 372 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 IL33O95760 270 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 RPL10P27635 214 aaKnown RBP9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 EPHA3P29320 983 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 RCVRNP35243 200 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 ARHGAP8P85298 464 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 RCAN2Q14206 197 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 LIN52Q52LA3 116 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 RAB41Q5JT25 222 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 CEP78Q5JTW2 689 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 SLC30A6Q6NXT4 461 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 POMZP3Q6PJE2 187 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 SLC35A5Q9BS91 424 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 PCDHGB2Q9Y5G2 931 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 FTCDNL1E5RQL4 147 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 TULP2O00295 520 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 B4GALT2O60909 372 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 KLK1P06870 262 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 ZNF3P17036 446 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 ZNF763Q0D2J5 394 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 TRAF3Q13114 568 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 SLC5A9Q2M3M2 681 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 SLC36A3Q495N2 470 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 APCDD1Q8J025 514 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 GPER1Q99527 375 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 OSBPL11Q9BXB4 747 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 ZCCHC3Q9NUD5 404 aaKnown RBP9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 PNPOQ9NVS9 261 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 SLC39A1Q9NY26 324 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 ARAP2Q8WZ64 1704 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 IQCF5A8MTL0 148 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 HMGCLP35914 325 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 ASTE1Q2TB18 679 aaPredicted RBP9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 AP1ARQ63HQ0 302 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 PAMR1Q6UXH9 720 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 GPRIN1Q7Z2K8 1008 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 PLPP6Q8IY26 295 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 MEIOBQ8N635 442 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 PQLC3Q8N755 202 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 OR52E4Q8NGH9 312 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 TSEN15Q8WW01 171 aaKnown RBP9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 GEMIN6Q8WXD5 167 aaKnown RBP9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 CD180Q99467 661 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 UGDHO60701 494 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 ABCB7O75027 752 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 POU2F2P09086 479 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 PGCP20142 388 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 PLCXD2Q0VAA5 305 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 CBX3Q13185 183 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 ARMC4Q5T2S8 1044 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 YOD1Q5VVQ6 348 aaPredicted RBP9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 GLYATQ6IB77 296 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 RPL13AP3Q6NVV1 102 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 FIGLAQ6QHK4 219 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 PIH1D2Q8WWB5 315 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 RCN3Q96D15 328 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 MARK4Q96L34 752 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 MRPS26Q9BYN8 205 aaKnown RBP9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 LIPT1Q9Y234 373 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 SLC22A14Q9Y267 594 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 RBM7Q9Y580 266 aaKnown RBP9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 POLR1CO15160 346 aaPredicted RBP9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 CD27P26842 260 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 SLC18A1P54219 525 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 OASLQ15646 514 aaKnown RBP9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 KLHL22Q53GT1 634 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 LCTLQ6UWM7 567 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 SYVN1Q86TM6 617 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 PACS2Q86VP3 889 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 CLHC1Q8NHS4 586 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 FER1L6-AS2Q96M78 137 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 HSPA12BQ96MM6 686 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 PTCHD1Q96NR3 888 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 LPAR4Q99677 370 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 ZFYVE21Q9BQ24 234 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 IL37Q9NZH6 218 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 THAP10Q9P2Z0 257 aaPredicted RBP9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 CDH22Q9UJ99 828 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 SSR3Q9UNL2 185 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 GDF10P55107 478 aa9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 RACK1P63244 317 aaKnown RBP9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 NTHL1P78549 312 aa9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 NXPE4Q6UWF7 544 aa9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 MSANTD1Q6ZTZ1 278 aa9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 PDZD3Q86UT5 571 aa9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 GIPC3Q8TF64 312 aa9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 UCN3Q969E3 161 aa9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 ABTB1Q969K4 478 aaPredicted RBP9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 KCND3Q9UK17 655 aa9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 TIMM22Q9Y584 194 aa9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 LDB2O43679 373 aa9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 NME6O75414 186 aaPredicted RBP9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 GAREM2Q75VX8 874 aa9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 BPHLQ86WA6 291 aaPredicted RBP9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 ZC3HC1Q86WB0 502 aaKnown RBP9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 AGBL5Q8NDL9 886 aa9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 TOR1AIP2Q8NFQ8 470 aa9.42□□□□□ -0.9
TNFRSF9-204ENST00000615230 FATE1Q969F0 183 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms