RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 TTLL6Q8N841 843 aa13.39□□□□□ -0.27
CHD1-212ENST00000614616 PCDHGB2Q9Y5G2 931 aa13.39□□□□□ -0.27
CHD1-212ENST00000614616 SLC33A1O00400 549 aaPredicted RBP13.39□□□□□ -0.27
CHD1-212ENST00000614616 RPLP2P05387 115 aaKnown RBP13.39□□□□□ -0.27
CHD1-212ENST00000614616 UBBP0CG47 229 aa13.39□□□□□ -0.27
CHD1-212ENST00000614616 UBCP0CG48 685 aaKnown RBP13.39□□□□□ -0.27
CHD1-212ENST00000614616 LUMP51884 338 aaPredicted RBP13.39□□□□□ -0.27
CHD1-212ENST00000614616 RPS27AP62979 156 aaKnown RBP13.39□□□□□ -0.27
CHD1-212ENST00000614616 UBA52P62987 128 aaKnown RBP13.39□□□□□ -0.27
CHD1-212ENST00000614616 C3orf33Q6P1S2 294 aa13.39□□□□□ -0.27
CHD1-212ENST00000614616 NXPE1Q8N323 547 aa13.39□□□□□ -0.27
CHD1-212ENST00000614616 XAGE5Q8WWM1 108 aa13.39□□□□□ -0.27
CHD1-212ENST00000614616 ZNF597Q96LX8 424 aa13.39□□□□□ -0.27
CHD1-212ENST00000614616 OR2M4Q96R27 311 aa13.39□□□□□ -0.27
CHD1-212ENST00000614616 TREX2Q9BQ50 279 aaPredicted RBP13.39□□□□□ -0.27
CHD1-212ENST00000614616 FZD4Q9ULV1 537 aa13.39□□□□□ -0.27
CHD1-212ENST00000614616 PCDH17O14917 1159 aa13.39□□□□□ -0.27
CHD1-212ENST00000614616 FLRT2O43155 660 aa13.39□□□□□ -0.27
CHD1-212ENST00000614616 ENGP17813 658 aa13.39□□□□□ -0.27
CHD1-212ENST00000614616 HOXD13P35453 343 aa13.39□□□□□ -0.27
CHD1-212ENST00000614616 SP140Q13342 867 aa13.39□□□□□ -0.27
CHD1-212ENST00000614616 TATDN3Q17R31 274 aa13.39□□□□□ -0.27
CHD1-212ENST00000614616 ZFP90Q8TF47 636 aa13.39□□□□□ -0.27
CHD1-212ENST00000614616 SLC22A17Q8WUG5 538 aa13.39□□□□□ -0.27
CHD1-212ENST00000614616 TSSK6Q9BXA6 273 aa13.39□□□□□ -0.27
CHD1-212ENST00000614616 TUBG2Q9NRH3 451 aa13.39□□□□□ -0.27
CHD1-212ENST00000614616 GSKIPQ9P0R6 139 aa13.39□□□□□ -0.27
CHD1-212ENST00000614616 RASGEF1BQ0VAM2 473 aa13.39□□□□□ -0.27
CHD1-212ENST00000614616 PNLDC1Q8NA58 520 aaKnown RBP13.39□□□□□ -0.27
CHD1-212ENST00000614616 PPP4R1LQ9P1A2 415 aa13.39□□□□□ -0.27
CHD1-212ENST00000614616 MED31Q9Y3C7 131 aa13.39□□□□□ -0.27
CHD1-212ENST00000614616 NUP188Q5SRE5 1749 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 LYRM1O43325 122 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 SC5DO75845 299 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 WDPCPO95876 746 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 MAOAP21397 527 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 AXLP30530 894 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 GAD2Q05329 585 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 CLEC12AQ5QGZ9 265 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 UBXN11Q5T124 520 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 ZSWIM9Q86XI8 627 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 RAVER1Q8IY67 606 aaKnown RBP13.38□□□□□ -0.27
CHD1-212ENST00000614616 PSD4Q8NDX1 1056 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 LIN37Q96GY3 246 aaPredicted RBP13.38□□□□□ -0.27
CHD1-212ENST00000614616 MEAF6Q9HAF1 191 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 EQTNQ9NQ60 294 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 WASH6PQ9NQA3 447 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 RUVBL1Q9Y265 456 aaKnown RBP13.38□□□□□ -0.27
CHD1-212ENST00000614616 UBXN7O94888 489 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 HSPA7P48741 367 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 FBXL19Q6PCT2 694 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 HACD2Q6Y1H2 254 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 GID4Q8IVV7 300 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 AGBL3Q8NEM8 1001 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 CPNE2Q96FN4 548 aaPredicted RBP13.38□□□□□ -0.27
CHD1-212ENST00000614616 ZNF536O15090 1300 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 SOBPA7XYQ1 873 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 DDX6P26196 483 aaKnown RBP eCLIP13.38□□□□□ -0.27
CHD1-212ENST00000614616 SNRPD1P62314 119 aaKnown RBP13.38□□□□□ -0.27
CHD1-212ENST00000614616 DUOXA1Q1HG43 343 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 RAB41Q5JT25 222 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 ATAT1Q5SQI0 421 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 ADGRA1Q86SQ6 560 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 ATP6V1C2Q8NEY4 427 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 OR6K6Q8NGW6 343 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 GAL3ST1Q99999 423 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 CDT1Q9H211 546 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 PCDHGA8Q9Y5G5 932 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 C17orf102A2RUQ5 167 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 WASHC1A8K0Z3 465 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 OR4F21O95013 312 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 GDF10P55107 478 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 ZNF33BQ06732 778 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 FAM151BQ6UXP7 276 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 CFAP77Q6ZQR2 320 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 ANGPTL6Q8NI99 470 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 TMIGD2Q96BF3 282 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 TXNDC15Q96J42 360 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 C7orf34Q96L11 122 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 SNX18Q96RF0 628 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 COLEC11Q9BWP8 271 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 CNTNAP4Q9C0A0 1308 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 PRAF2O60831 178 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 SPRED3Q2MJR0 410 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 MFSD14CQ5VZR4 134 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 ZNF574Q6ZN55 896 aaPredicted RBP13.38□□□□□ -0.27
CHD1-212ENST00000614616 TBX5Q99593 518 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 SLC35A5Q9BS91 424 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 POTEKPQ9BYX7 375 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 HCN4Q9Y3Q4 1203 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 OR6C65A6NJZ3 312 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 ARPC5O15511 151 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 EEDO75530 441 aaKnown RBP13.38□□□□□ -0.27
CHD1-212ENST00000614616 ADRA2BP18089 450 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 NOMO2Q5JPE7 1267 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 MINDY1Q8N5J2 469 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 C12orf29Q8N999 325 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 OR2T35Q8NGX2 323 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 DENND1AQ8TEH3 1009 aa13.38□□□□□ -0.27
CHD1-212ENST00000614616 RERGQ96A58 199 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms