RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 SLC25A32Q9H2D1 315 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 MS4A12Q9NXJ0 267 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 CALML5Q9NZT1 146 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 ADAM18Q9Y3Q7 739 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 BUD23O43709 281 aaKnown RBP4.82□□□□□ -1.64
VPS13D-213ENST00000613099 TPOP07202 933 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 ACOT2P49753 483 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 JAM2P57087 298 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 GRIN2CQ14957 1233 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 BATFQ16520 125 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 ACOX2Q99424 681 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 TMEM47Q9BQJ4 181 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 SEC22CQ9BRL7 303 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 LXNQ9BS40 222 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 CDHR5Q9HBB8 845 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 USP54Q70EL1 1684 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 A8MUA0 341 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 H0YIN7 160 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 EEF1E1O43324 174 aaKnown RBP4.82□□□□□ -1.64
VPS13D-213ENST00000613099 ZNF821O75541 412 aaPredicted RBP4.82□□□□□ -1.64
VPS13D-213ENST00000613099 SLC34A2O95436 690 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 GTF2F2P13984 249 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 TPSB2P20231 275 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 SNTB2Q13425 540 aaKnown RBP4.82□□□□□ -1.64
VPS13D-213ENST00000613099 TPSAB1Q15661 275 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 YIF1BQ5BJH7 314 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 ZRANB3Q5FWF4 1079 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 OAFQ86UD1 273 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 NAGSQ8N159 534 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 SYNE4Q8N205 404 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 AUTS2Q8WXX7 1259 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 RPL3LQ92901 407 aaKnown RBP4.82□□□□□ -1.64
VPS13D-213ENST00000613099 ELMOD3Q96FG2 381 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 S100A16Q96FQ6 103 aaKnown RBP4.82□□□□□ -1.64
VPS13D-213ENST00000613099 ZNF419Q96HQ0 510 aaPredicted RBP4.82□□□□□ -1.64
VPS13D-213ENST00000613099 CATSPERBQ9H7T0 1116 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 SLC1A7O00341 560 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 CRHBPP24387 322 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 NOS3P29474 1203 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 CLCN5P51795 746 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 ZDHHC20Q5W0Z9 365 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 CXorf57Q6NSI4 855 aaKnown RBP4.82□□□□□ -1.64
VPS13D-213ENST00000613099 DDX1Q92499 740 aaKnown RBP4.82□□□□□ -1.64
VPS13D-213ENST00000613099 MMP19Q99542 508 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 ANKRD31Q8N7Z5 1873 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 PCDH17O14917 1159 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 TMEM127O75204 238 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 ECHS1P30084 290 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 HEPACAMQ14CZ8 416 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 MBLAC2Q68D91 279 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 MFSD6LQ8IWD5 586 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 CHDHQ8NE62 594 aaPredicted RBP4.82□□□□□ -1.64
VPS13D-213ENST00000613099 ASB13Q8WXK3 278 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 MFFQ9GZY8 342 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 GPRC5BQ9NZH0 403 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 ZIM2Q9NZV7 527 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 ERVW-1Q9UQF0 538 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 TMEM210A6NLX4 147 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 SCGB1D1O95968 90 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 EMP3P54852 163 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 HNRNPA0Q13151 305 aaKnown RBP4.82□□□□□ -1.64
VPS13D-213ENST00000613099 Q3C1V9 767 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 CLLU1Q5K131 121 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 GSG1LQ6UXU4 331 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 BTF3L4Q96K17 158 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 SLC38A3Q99624 504 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 ZNF490Q9ULM2 529 aaPredicted RBP4.82□□□□□ -1.64
VPS13D-213ENST00000613099 USP17L5A8MUK1 530 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 SEC22BO75396 215 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 GIPRP48546 466 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 CYCSP99999 105 aaKnown RBP4.82□□□□□ -1.64
VPS13D-213ENST00000613099 ZNF124Q15973 351 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 TRIM40Q6P9F5 258 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 LINGO2Q7L985 606 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 SETD7Q8WTS6 366 aaKnown RBP4.82□□□□□ -1.64
VPS13D-213ENST00000613099 NELL1Q92832 810 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 CPNE4Q96A23 557 aaPredicted RBP4.82□□□□□ -1.64
VPS13D-213ENST00000613099 COA7Q96BR5 231 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 ELP4Q96EB1 424 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 KCTD10Q9H3F6 313 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 TUT1Q9H6E5 874 aaKnown RBP4.82□□□□□ -1.64
VPS13D-213ENST00000613099 AKIP1Q9NQ31 210 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 KLHL28Q9NXS3 571 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 EXTL2Q9UBQ6 330 aa4.82□□□□□ -1.64
VPS13D-213ENST00000613099 A0A0A6YYH2 397 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 A6NJ64 397 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 TOXO94900 526 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 ADORA3P0DMS8 318 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 CHRNB2P17787 502 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 MEDAGQ5VYS4 303 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 IL27RAQ6UWB1 636 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 FAM156AQ8NDB6 213 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 RAD9AQ99638 391 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 MAGIXQ9H6Y5 334 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 MINDY3Q9H8M7 445 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 CYP8B1Q9UNU6 501 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 MYOCOSA0A1B0GUC4 107 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 M0R143 59 aa4.81□□□□□ -1.64
VPS13D-213ENST00000613099 SRPRAP08240 638 aaKnown RBP4.81□□□□□ -1.64
VPS13D-213ENST00000613099 LINC00032P0C843 101 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms