RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 MCOLN3Q8TDD5 553 aa16.21■□□□□ 0.19
CSNK1E-215ENST00000612795 ZNF778Q96MU6 729 aa16.21■□□□□ 0.19
CSNK1E-215ENST00000612795 FOXC2Q99958 501 aa16.21■□□□□ 0.19
CSNK1E-215ENST00000612795 KCNJ16Q9NPI9 418 aa16.21■□□□□ 0.19
CSNK1E-215ENST00000612795 HCN3Q9P1Z3 774 aa16.21■□□□□ 0.19
CSNK1E-215ENST00000612795 KCNN3Q9UGI6 736 aa16.21■□□□□ 0.19
CSNK1E-215ENST00000612795 TFR2Q9UP52 801 aa16.21■□□□□ 0.19
CSNK1E-215ENST00000612795 ACANP16112 2415 aa16.2■□□□□ 0.18
CSNK1E-215ENST00000612795 CBFA2T2O43439 604 aa16.2■□□□□ 0.18
CSNK1E-215ENST00000612795 NME2P1O60361 137 aa16.2■□□□□ 0.18
CSNK1E-215ENST00000612795 STATHP02808 62 aa16.2■□□□□ 0.18
CSNK1E-215ENST00000612795 ERGP11308 486 aa16.2■□□□□ 0.18
CSNK1E-215ENST00000612795 KLK2P20151 261 aa16.2■□□□□ 0.18
CSNK1E-215ENST00000612795 NME2P22392 152 aa16.2■□□□□ 0.18
CSNK1E-215ENST00000612795 ADRA1DP25100 572 aa16.2■□□□□ 0.18
CSNK1E-215ENST00000612795 MSX1P28360 303 aa16.2■□□□□ 0.18
CSNK1E-215ENST00000612795 EIF3BP55884 814 aaKnown RBP16.2■□□□□ 0.18
CSNK1E-215ENST00000612795 RWDD2BP57060 319 aa16.2■□□□□ 0.18
CSNK1E-215ENST00000612795 FOLH1Q04609 750 aa16.2■□□□□ 0.18
CSNK1E-215ENST00000612795 ACTN3Q08043 901 aaPredicted RBP16.2■□□□□ 0.18
CSNK1E-215ENST00000612795 ANKRD20A4Q4UJ75 823 aa16.2■□□□□ 0.18
CSNK1E-215ENST00000612795 RNFT1Q5M7Z0 435 aa16.2■□□□□ 0.18
CSNK1E-215ENST00000612795 PPHLN1Q8NEY8 458 aaKnown RBP16.2■□□□□ 0.18
CSNK1E-215ENST00000612795 OR51Q1Q8NH59 317 aa16.2■□□□□ 0.18
CSNK1E-215ENST00000612795 LPAR4Q99677 370 aa16.2■□□□□ 0.18
CSNK1E-215ENST00000612795 OLFM1Q99784 485 aa16.2■□□□□ 0.18
CSNK1E-215ENST00000612795 ABCF3Q9NUQ8 709 aa16.2■□□□□ 0.18
CSNK1E-215ENST00000612795 MARCH4Q9P2E8 410 aaPredicted RBP16.2■□□□□ 0.18
CSNK1E-215ENST00000612795 AKAP6Q13023 2319 aa16.19■□□□□ 0.18
CSNK1E-215ENST00000612795 A0A1B0GTL3 188 aa16.19■□□□□ 0.18
CSNK1E-215ENST00000612795 OR2W5A6NFC9 320 aa16.19■□□□□ 0.18
CSNK1E-215ENST00000612795 ERI2A8K979 691 aaKnown RBP16.19■□□□□ 0.18
CSNK1E-215ENST00000612795 NDC80O14777 642 aa16.19■□□□□ 0.18
CSNK1E-215ENST00000612795 HAT1O14929 419 aa16.19■□□□□ 0.18
CSNK1E-215ENST00000612795 CDC40O60508 579 aaKnown RBP eCLIP16.19■□□□□ 0.18
CSNK1E-215ENST00000612795 NSA2O95478 260 aaKnown RBP16.19■□□□□ 0.18
CSNK1E-215ENST00000612795 PRDX1Q06830 199 aaKnown RBP16.19■□□□□ 0.18
CSNK1E-215ENST00000612795 SFT2D3Q587I9 215 aa16.19■□□□□ 0.18
CSNK1E-215ENST00000612795 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.19■□□□□ 0.18
CSNK1E-215ENST00000612795 LRRC6Q86X45 466 aa16.19■□□□□ 0.18
CSNK1E-215ENST00000612795 PLD3Q8IV08 490 aa16.19■□□□□ 0.18
CSNK1E-215ENST00000612795 LGI4Q8N135 537 aa16.19■□□□□ 0.18
CSNK1E-215ENST00000612795 OTUD6BQ8N6M0 293 aa16.19■□□□□ 0.18
CSNK1E-215ENST00000612795 LILRB4Q8NHJ6 448 aa16.19■□□□□ 0.18
CSNK1E-215ENST00000612795 RND1Q92730 232 aa16.19■□□□□ 0.18
CSNK1E-215ENST00000612795 TMEM125Q96AQ2 219 aa16.19■□□□□ 0.18
CSNK1E-215ENST00000612795 UCK2Q9BZX2 261 aa16.19■□□□□ 0.18
CSNK1E-215ENST00000612795 P2RY12Q9H244 342 aa16.19■□□□□ 0.18
CSNK1E-215ENST00000612795 CXXC4Q9H2H0 198 aa16.19■□□□□ 0.18
CSNK1E-215ENST00000612795 CDCP1Q9H5V8 836 aa16.19■□□□□ 0.18
CSNK1E-215ENST00000612795 SLC24A3Q9HC58 644 aa16.19■□□□□ 0.18
CSNK1E-215ENST00000612795 RNF6Q9Y252 685 aa16.19■□□□□ 0.18
CSNK1E-215ENST00000612795 TCAF1Q9Y4C2 921 aa16.19■□□□□ 0.18
CSNK1E-215ENST00000612795 DNAJC13O75165 2243 aa16.18■□□□□ 0.18
CSNK1E-215ENST00000612795 A0A1B0GTH9 108 aa16.18■□□□□ 0.18
CSNK1E-215ENST00000612795 ZNF839A8K0R7 811 aa16.18■□□□□ 0.18
CSNK1E-215ENST00000612795 ARHGEF33A8MVX0 844 aa16.18■□□□□ 0.18
CSNK1E-215ENST00000612795 E7EVH7 732 aa16.18■□□□□ 0.18
CSNK1E-215ENST00000612795 CD3EAPO15446 510 aaKnown RBP16.18■□□□□ 0.18
CSNK1E-215ENST00000612795 NDUFS3O75489 264 aa16.18■□□□□ 0.18
CSNK1E-215ENST00000612795 IL1RNP18510 177 aa16.18■□□□□ 0.18
CSNK1E-215ENST00000612795 PNLIPRP1P54315 467 aa16.18■□□□□ 0.18
CSNK1E-215ENST00000612795 TFF3Q07654 80 aa16.18■□□□□ 0.18
CSNK1E-215ENST00000612795 ARHGAP19Q14CB8 494 aa16.18■□□□□ 0.18
CSNK1E-215ENST00000612795 ABRAXAS2Q15018 415 aa16.18■□□□□ 0.18
CSNK1E-215ENST00000612795 PRSS41Q7RTY9 318 aa16.18■□□□□ 0.18
CSNK1E-215ENST00000612795 CNGA4Q8IV77 575 aa16.18■□□□□ 0.18
CSNK1E-215ENST00000612795 VSTM4Q8IW00 320 aa16.18■□□□□ 0.18
CSNK1E-215ENST00000612795 MARVELD2Q8N4S9 558 aa16.18■□□□□ 0.18
CSNK1E-215ENST00000612795 POGLUT1Q8NBL1 392 aa16.18■□□□□ 0.18
CSNK1E-215ENST00000612795 PEX13Q92968 403 aa16.18■□□□□ 0.18
CSNK1E-215ENST00000612795 NINJ1Q92982 152 aa16.18■□□□□ 0.18
CSNK1E-215ENST00000612795 EBNA1BP2Q99848 306 aaKnown RBP16.18■□□□□ 0.18
CSNK1E-215ENST00000612795 RBCK1Q9BYM8 510 aa16.18■□□□□ 0.18
CSNK1E-215ENST00000612795 TP63Q9H3D4 680 aaPredicted RBP16.18■□□□□ 0.18
CSNK1E-215ENST00000612795 FAM114A2Q9NRY5 505 aa16.18■□□□□ 0.18
CSNK1E-215ENST00000612795 CCM2LQ9NUG4 571 aaPredicted RBP16.18■□□□□ 0.18
CSNK1E-215ENST00000612795 TMEM200CA6NKL6 621 aa16.17■□□□□ 0.18
CSNK1E-215ENST00000612795 USP27XA6NNY8 438 aa16.17■□□□□ 0.18
CSNK1E-215ENST00000612795 MYO1CO00159 1063 aa16.17■□□□□ 0.18
CSNK1E-215ENST00000612795 SMAPO00193 183 aa16.17■□□□□ 0.18
CSNK1E-215ENST00000612795 PRMT3O60678 531 aa16.17■□□□□ 0.18
CSNK1E-215ENST00000612795 TOXO94900 526 aa16.17■□□□□ 0.18
CSNK1E-215ENST00000612795 MATN4O95460 622 aa16.17■□□□□ 0.18
CSNK1E-215ENST00000612795 HOXD4P09016 255 aaPredicted RBP16.17■□□□□ 0.18
CSNK1E-215ENST00000612795 RPS3P23396 243 aaKnown RBP eCLIP16.17■□□□□ 0.18
CSNK1E-215ENST00000612795 CYB561P49447 251 aa16.17■□□□□ 0.18
CSNK1E-215ENST00000612795 MEOX1P50221 254 aa16.17■□□□□ 0.18
CSNK1E-215ENST00000612795 SNRPNP63162 240 aaKnown RBP16.17■□□□□ 0.18
CSNK1E-215ENST00000612795 RELAQ04206 551 aa16.17■□□□□ 0.18
CSNK1E-215ENST00000612795 USP10Q14694 798 aaKnown RBP16.17■□□□□ 0.18
CSNK1E-215ENST00000612795 NSDHLQ15738 373 aa16.17■□□□□ 0.18
CSNK1E-215ENST00000612795 THEMIS2Q5TEJ8 643 aa16.17■□□□□ 0.18
CSNK1E-215ENST00000612795 MEI1Q5TIA1 1274 aa16.17■□□□□ 0.18
CSNK1E-215ENST00000612795 ZNF468Q5VIY5 522 aaPredicted RBP16.17■□□□□ 0.18
CSNK1E-215ENST00000612795 RPS19BP1Q86WX3 136 aaKnown RBP16.17■□□□□ 0.18
CSNK1E-215ENST00000612795 PPFIBP2Q8ND30 876 aa16.17■□□□□ 0.18
CSNK1E-215ENST00000612795 FAM136AQ96C01 138 aa16.17■□□□□ 0.18
CSNK1E-215ENST00000612795 PCDHA13Q9Y5I0 950 aa16.17■□□□□ 0.18
CSNK1E-215ENST00000612795 ZNF407Q9C0G0 2248 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms