RNA–Protein interactions for RNA: ENST00000601065.5

SNRNP70-209, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 3

Gene SNRNP70, Length 1,757 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-209ENST00000601065 TGM7Q96PF1 710 aa21.15■□□□□ 0.98
SNRNP70-209ENST00000601065 SARGQ9BW04 601 aa21.15■□□□□ 0.98
SNRNP70-209ENST00000601065 NT5DC2Q9H857 520 aa21.15■□□□□ 0.98
SNRNP70-209ENST00000601065 TSC22D4Q9Y3Q8 395 aa21.15■□□□□ 0.98
SNRNP70-209ENST00000601065 UNC13CQ8NB66 2214 aa21.15■□□□□ 0.98
SNRNP70-209ENST00000601065 PCNAP12004 261 aa21.15■□□□□ 0.98
SNRNP70-209ENST00000601065 CDH3P22223 829 aa21.15■□□□□ 0.98
SNRNP70-209ENST00000601065 CSF2RBP32927 897 aa21.15■□□□□ 0.98
SNRNP70-209ENST00000601065 ZNF33BQ06732 778 aa21.15■□□□□ 0.98
SNRNP70-209ENST00000601065 RBBP5Q15291 538 aaKnown RBP21.15■□□□□ 0.98
SNRNP70-209ENST00000601065 C10orf62Q5T681 223 aaPredicted RBP21.15■□□□□ 0.98
SNRNP70-209ENST00000601065 METTL21CQ5VZV1 264 aa21.15■□□□□ 0.98
SNRNP70-209ENST00000601065 TMEM198Q66K66 360 aa21.15■□□□□ 0.98
SNRNP70-209ENST00000601065 FAM92BQ6ZTR7 304 aa21.15■□□□□ 0.98
SNRNP70-209ENST00000601065 TRIM46Q7Z4K8 759 aa21.15■□□□□ 0.98
SNRNP70-209ENST00000601065 PLD3Q8IV08 490 aa21.15■□□□□ 0.98
SNRNP70-209ENST00000601065 ANKRD53Q8N9V6 530 aa21.15■□□□□ 0.98
SNRNP70-209ENST00000601065 HUS1BQ8NHY5 278 aa21.15■□□□□ 0.98
SNRNP70-209ENST00000601065 BAHD1Q8TBE0 780 aaPredicted RBP21.15■□□□□ 0.98
SNRNP70-209ENST00000601065 ZDHHC12Q96GR4 267 aa21.15■□□□□ 0.98
SNRNP70-209ENST00000601065 MTERF1Q99551 399 aaKnown RBP21.15■□□□□ 0.98
SNRNP70-209ENST00000601065 MAP3K3Q99759 626 aa21.15■□□□□ 0.98
SNRNP70-209ENST00000601065 KLHL25Q9H0H3 589 aa21.15■□□□□ 0.98
SNRNP70-209ENST00000601065 SEMA6CQ9H3T2 930 aa21.15■□□□□ 0.98
SNRNP70-209ENST00000601065 AKTIPQ9H8T0 292 aa21.15■□□□□ 0.98
SNRNP70-209ENST00000601065 PFDN4Q9NQP4 134 aa21.15■□□□□ 0.98
SNRNP70-209ENST00000601065 C1GALT1Q9NS00 363 aa21.15■□□□□ 0.98
SNRNP70-209ENST00000601065 ARMCX1Q9P291 453 aa21.15■□□□□ 0.98
SNRNP70-209ENST00000601065 TRBC2A0A5B9 178 aa21.14■□□□□ 0.97
SNRNP70-209ENST00000601065 SERTM1A2A2V5 107 aa21.14■□□□□ 0.97
SNRNP70-209ENST00000601065 C4orf47A7E2U8 309 aa21.14■□□□□ 0.97
SNRNP70-209ENST00000601065 SH3BP5O60239 455 aa21.14■□□□□ 0.97
SNRNP70-209ENST00000601065 LCMT2O60294 686 aaKnown RBP21.14■□□□□ 0.97
SNRNP70-209ENST00000601065 HOXB3P14651 431 aaPredicted RBP21.14■□□□□ 0.97
SNRNP70-209ENST00000601065 CKMT2P17540 419 aa21.14■□□□□ 0.97
SNRNP70-209ENST00000601065 WDR74Q6RFH5 385 aaPredicted RBP21.14■□□□□ 0.97
SNRNP70-209ENST00000601065 Q6ZSR9 355 aa21.14■□□□□ 0.97
SNRNP70-209ENST00000601065 USP53Q70EK8 1073 aa21.14■□□□□ 0.97
SNRNP70-209ENST00000601065 LARP4Q71RC2 724 aaKnown RBP eCLIP21.14■□□□□ 0.972e-7■■□□□ 12
SNRNP70-209ENST00000601065 PLXDC1Q8IUK5 500 aa21.14■□□□□ 0.97
SNRNP70-209ENST00000601065 NAXDQ8IW45 347 aa21.14■□□□□ 0.97
SNRNP70-209ENST00000601065 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.14■□□□□ 0.977e-7■■■■■ 43.5
SNRNP70-209ENST00000601065 RNF175Q8N4F7 328 aa21.14■□□□□ 0.97
SNRNP70-209ENST00000601065 OR2T11Q8NH01 316 aa21.14■□□□□ 0.97
SNRNP70-209ENST00000601065 TUBGCP3Q96CW5 907 aa21.14■□□□□ 0.97
SNRNP70-209ENST00000601065 FTSJ1Q9UET6 329 aa21.14■□□□□ 0.97
SNRNP70-209ENST00000601065 GIMAP2Q9UG22 337 aa21.14■□□□□ 0.97
SNRNP70-209ENST00000601065 G3BP2Q9UN86 482 aaKnown RBP21.14■□□□□ 0.97
SNRNP70-209ENST00000601065 TRIM33Q9UPN9 1127 aa21.14■□□□□ 0.97
SNRNP70-209ENST00000601065 HCN4Q9Y3Q4 1203 aa21.14■□□□□ 0.97
SNRNP70-209ENST00000601065 TLCD2A6NGC4 264 aa21.13■□□□□ 0.97
SNRNP70-209ENST00000601065 OR1F1O43749 312 aa21.13■□□□□ 0.97
SNRNP70-209ENST00000601065 KIF1CO43896 1103 aaKnown RBP21.13■□□□□ 0.97
SNRNP70-209ENST00000601065 FOXD2O60548 495 aaPredicted RBP21.13■□□□□ 0.97
SNRNP70-209ENST00000601065 C9P02748 559 aa21.13■□□□□ 0.97
SNRNP70-209ENST00000601065 EZRP15311 586 aaKnown RBP21.13■□□□□ 0.97
SNRNP70-209ENST00000601065 ST6GAL1P15907 406 aa21.13■□□□□ 0.97
SNRNP70-209ENST00000601065 SCTRP47872 440 aa21.13■□□□□ 0.97
SNRNP70-209ENST00000601065 SQSTM1Q13501 440 aa21.13■□□□□ 0.97
SNRNP70-209ENST00000601065 DDX39BQ13838 428 aaKnown RBP21.13■□□□□ 0.97
SNRNP70-209ENST00000601065 TRAPPC9Q96Q05 1148 aa21.13■□□□□ 0.97
SNRNP70-209ENST00000601065 CD180Q99467 661 aa21.13■□□□□ 0.97
SNRNP70-209ENST00000601065 ACPTQ9BZG2 426 aa21.13■□□□□ 0.97
SNRNP70-209ENST00000601065 ZMYND15Q9H091 742 aa21.13■□□□□ 0.97
SNRNP70-209ENST00000601065 RHBGQ9H310 441 aa21.13■□□□□ 0.97
SNRNP70-209ENST00000601065 SAR1AQ9NR31 198 aa21.13■□□□□ 0.97
SNRNP70-209ENST00000601065 CCL27Q9Y4X3 112 aa21.13■□□□□ 0.97
SNRNP70-209ENST00000601065 MN1Q10571 1320 aaPredicted RBP21.13■□□□□ 0.97
SNRNP70-209ENST00000601065 A0A1W2PQM1 296 aa21.13■□□□□ 0.97
SNRNP70-209ENST00000601065 MAGEB17A8MXT2 336 aa21.13■□□□□ 0.97
SNRNP70-209ENST00000601065 GDF9O60383 454 aa21.13■□□□□ 0.97
SNRNP70-209ENST00000601065 PRAMEF10O60809 474 aa21.13■□□□□ 0.97
SNRNP70-209ENST00000601065 UBOX5O94941 541 aa21.13■□□□□ 0.97
SNRNP70-209ENST00000601065 BCL6P41182 706 aa21.13■□□□□ 0.97
SNRNP70-209ENST00000601065 PIK3CBP42338 1070 aa21.13■□□□□ 0.97
SNRNP70-209ENST00000601065 CCL7P80098 99 aa21.13■□□□□ 0.97
SNRNP70-209ENST00000601065 UBAP2LQ14157 1087 aaKnown RBP21.13■□□□□ 0.97
SNRNP70-209ENST00000601065 ZIC1Q15915 447 aa21.13■□□□□ 0.97
SNRNP70-209ENST00000601065 CCDC121Q6ZUS5 278 aa21.13■□□□□ 0.97
SNRNP70-209ENST00000601065 VN1R5Q7Z5H4 357 aa21.13■□□□□ 0.97
SNRNP70-209ENST00000601065 BRF2Q9HAW0 419 aa21.13■□□□□ 0.97
SNRNP70-209ENST00000601065 MDC1Q14676 2089 aaKnown RBP21.12■□□□□ 0.97
SNRNP70-209ENST00000601065 SLC28A1O00337 649 aa21.12■□□□□ 0.97
SNRNP70-209ENST00000601065 FOXE1O00358 373 aaPredicted RBP21.12■□□□□ 0.97
SNRNP70-209ENST00000601065 CTSVO60911 334 aa21.12■□□□□ 0.97
SNRNP70-209ENST00000601065 VPS4BO75351 444 aa21.12■□□□□ 0.97
SNRNP70-209ENST00000601065 RPLP0P05388 317 aaKnown RBP21.12■□□□□ 0.97
SNRNP70-209ENST00000601065 ACP1P24666 158 aa21.12■□□□□ 0.97
SNRNP70-209ENST00000601065 HMGCS1Q01581 520 aa21.12■□□□□ 0.97
SNRNP70-209ENST00000601065 RELAQ04206 551 aa21.12■□□□□ 0.97
SNRNP70-209ENST00000601065 CSTF3Q12996 717 aaKnown RBP21.12■□□□□ 0.97
SNRNP70-209ENST00000601065 FBXO42Q6P3S6 717 aa21.12■□□□□ 0.97
SNRNP70-209ENST00000601065 TBC1D19Q8N5T2 526 aa21.12■□□□□ 0.97
SNRNP70-209ENST00000601065 GBP7Q8N8V2 638 aaPredicted RBP21.12■□□□□ 0.97
SNRNP70-209ENST00000601065 C19orf47Q8N9M1 422 aaKnown RBP21.12■□□□□ 0.97
SNRNP70-209ENST00000601065 MARK4Q96L34 752 aa21.12■□□□□ 0.97
SNRNP70-209ENST00000601065 CATSPER2Q96P56 530 aa21.12■□□□□ 0.97
SNRNP70-209ENST00000601065 NUDT22Q9BRQ3 303 aa21.12■□□□□ 0.97
SNRNP70-209ENST00000601065 LRRN3Q9H3W5 708 aa21.12■□□□□ 0.97
SNRNP70-209ENST00000601065 DMRT3Q9NQL9 472 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms