RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 EFCAB11Q9BUY7 163 aa11.17□□□□□ -0.62
CHMP2A-207ENST00000600804 ACAT2Q9BWD1 397 aa11.17□□□□□ -0.62
CHMP2A-207ENST00000600804 CCDC134Q9H6E4 229 aa11.17□□□□□ -0.62
CHMP2A-207ENST00000600804 IPPKQ9H8X2 491 aa11.17□□□□□ -0.62
CHMP2A-207ENST00000600804 HAO1Q9UJM8 370 aa11.17□□□□□ -0.62
CHMP2A-207ENST00000600804 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.17□□□□□ -0.62
CHMP2A-207ENST00000600804 ANGPTL3Q9Y5C1 460 aa11.17□□□□□ -0.62
CHMP2A-207ENST00000600804 NBASA2RRP1 2371 aa11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 KCNE1BA0A087WTH5 132 aa11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 IGHV5-51A0A0C4DH38 117 aa11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 K7ENP7 123 aa11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 PRAMEF4O60810 478 aa11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 SNNO75324 88 aaPredicted RBP11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 ESRRBO95718 433 aa11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 ENO1P06733 434 aaKnown RBP11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 FGF4P08620 206 aa11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 CDH1P12830 882 aa11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 EZRP15311 586 aaKnown RBP11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 ST6GAL1P15907 406 aa11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 CDH3P22223 829 aa11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 GRK3P35626 688 aa11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 CCNG1P51959 295 aa11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 UCNP55089 124 aa11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 CSNK1G2P78368 415 aa11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 REEP5Q00765 189 aa11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 IRF8Q02556 426 aa11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 ZNF33BQ06732 778 aa11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 SRSF6Q13247 344 aaKnown RBP11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 CLN3Q13286 438 aa11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 TSTA3Q13630 321 aaPredicted RBP11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 CHI3L2Q15782 390 aa11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 PAGE2BQ5JRK9 111 aa11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 CACHD1Q5VU97 1274 aa11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 BROXQ5VW32 411 aa11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 PRAMEF9Q5VWM5 478 aa11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 ATG16L1Q676U5 607 aa11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 INO80CQ6PI98 192 aaPredicted RBP11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 RNF165Q6ZSG1 346 aa11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 RNF44Q7L0R7 432 aa11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 D2HGDHQ8N465 521 aa11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 CCNYL1Q8N7R7 359 aa11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 EXD3Q8N9H8 876 aa11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 C19orf47Q8N9M1 422 aaKnown RBP11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 SNX31Q8N9S9 440 aa11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 MGARPQ8TDB4 240 aa11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 CKAP2Q8WWK9 683 aa11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 UBE2E3Q969T4 207 aa11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 MAGEB18Q96M61 343 aa11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 SLC46A1Q96NT5 459 aa11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 NSUN5Q96P11 429 aaKnown RBP11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 AIF1LQ9BQI0 150 aa11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 DPH7Q9BTV6 452 aa11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 DPH1Q9BZG8 443 aa11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 NOL11Q9H8H0 719 aaKnown RBP11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 MANSC1Q9H8J5 431 aa11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 EML4Q9HC35 981 aaKnown RBP11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 MLXIPLQ9NP71 852 aa11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 SLC6A20Q9NP91 592 aa11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 THAP1Q9NVV9 213 aa11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 CUEDC1Q9NWM3 386 aaPredicted RBP11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 TRPS1Q9UHF7 1281 aa11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 ZNF225Q9UK10 706 aa11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 PILRAQ9UKJ1 303 aa11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 ATXN7L1Q9ULK2 861 aaPredicted RBP11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 PPT2Q9UMR5 302 aa11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 SH2B3Q9UQQ2 575 aa11.16□□□□□ -0.62
CHMP2A-207ENST00000600804 TRBC2A0A5B9 178 aa11.15□□□□□ -0.62
CHMP2A-207ENST00000600804 E7EQ34 232 aa11.15□□□□□ -0.62
CHMP2A-207ENST00000600804 H0YIV9 168 aa11.15□□□□□ -0.62
CHMP2A-207ENST00000600804 MAP3K7O43318 606 aa11.15□□□□□ -0.62
CHMP2A-207ENST00000600804 CLDN9O95484 217 aa11.15□□□□□ -0.62
CHMP2A-207ENST00000600804 NELFEP18615 380 aaKnown RBP11.15□□□□□ -0.62
CHMP2A-207ENST00000600804 MAGP20916 626 aa11.15□□□□□ -0.62
CHMP2A-207ENST00000600804 BGNP21810 368 aa11.15□□□□□ -0.62
CHMP2A-207ENST00000600804 SERPINB1P30740 379 aa11.15□□□□□ -0.62
CHMP2A-207ENST00000600804 AHRP35869 848 aa11.15□□□□□ -0.62
CHMP2A-207ENST00000600804 INHBCP55103 352 aa11.15□□□□□ -0.62
CHMP2A-207ENST00000600804 CDH13P55290 713 aa11.15□□□□□ -0.62
CHMP2A-207ENST00000600804 ABCE1P61221 599 aaKnown RBP11.15□□□□□ -0.62
CHMP2A-207ENST00000600804 RPS15AP62244 130 aaKnown RBP11.15□□□□□ -0.62
CHMP2A-207ENST00000600804 YBX1P67809 324 aaKnown RBP11.15□□□□□ -0.62
CHMP2A-207ENST00000600804 HSD11B2P80365 405 aa11.15□□□□□ -0.62
CHMP2A-207ENST00000600804 CHIT1Q13231 466 aa11.15□□□□□ -0.62
CHMP2A-207ENST00000600804 STX3Q13277 289 aa11.15□□□□□ -0.62
CHMP2A-207ENST00000600804 DOC2AQ14183 400 aa11.15□□□□□ -0.62
CHMP2A-207ENST00000600804 CATSPEREQ5SY80 951 aa11.15□□□□□ -0.62
CHMP2A-207ENST00000600804 FCRL6Q6DN72 434 aa11.15□□□□□ -0.62
CHMP2A-207ENST00000600804 GRHL2Q6ISB3 625 aa11.15□□□□□ -0.62
CHMP2A-207ENST00000600804 FAM92BQ6ZTR7 304 aa11.15□□□□□ -0.62
CHMP2A-207ENST00000600804 GPRIN3Q6ZVF9 776 aa11.15□□□□□ -0.62
CHMP2A-207ENST00000600804 MILR1Q7Z6M3 343 aa11.15□□□□□ -0.62
CHMP2A-207ENST00000600804 TMPRSS11BQ86T26 416 aa11.15□□□□□ -0.62
CHMP2A-207ENST00000600804 TRIM73Q86UV7 250 aa11.15□□□□□ -0.62
CHMP2A-207ENST00000600804 LAS2Q8IYD9 372 aa11.15□□□□□ -0.62
CHMP2A-207ENST00000600804 KRT78Q8N1N4 520 aa11.15□□□□□ -0.62
CHMP2A-207ENST00000600804 TBC1D19Q8N5T2 526 aa11.15□□□□□ -0.62
CHMP2A-207ENST00000600804 TTLQ8NG68 377 aa11.15□□□□□ -0.62
CHMP2A-207ENST00000600804 OR52B6Q8NGF0 335 aa11.15□□□□□ -0.62
CHMP2A-207ENST00000600804 PPP1R14CQ8TAE6 165 aa11.15□□□□□ -0.62
CHMP2A-207ENST00000600804 TRPC4APQ8TEL6 797 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms