RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 SYNPO2LQ9H987 977 aa18.05■□□□□ 0.48
CCDC9-205ENST00000600117 PELI2Q9HAT8 420 aa18.05■□□□□ 0.48
CCDC9-205ENST00000600117 ACSS2Q9NR19 701 aa18.05■□□□□ 0.48
CCDC9-205ENST00000600117 AKAP7Q9P0M2 348 aaPredicted RBP18.05■□□□□ 0.48
CCDC9-205ENST00000600117 IL17BQ9UHF5 180 aa18.05■□□□□ 0.48
CCDC9-205ENST00000600117 SATB2Q9UPW6 733 aa18.05■□□□□ 0.48
CCDC9-205ENST00000600117 HMGB1P1B2RPK0 211 aaPredicted RBP18.04■□□□□ 0.48
CCDC9-205ENST00000600117 HAT1O14929 419 aa18.04■□□□□ 0.48
CCDC9-205ENST00000600117 PLD2O14939 933 aa18.04■□□□□ 0.48
CCDC9-205ENST00000600117 ZWINTO95229 277 aa18.04■□□□□ 0.48
CCDC9-205ENST00000600117 C1GALT1C1LP0DN25 315 aa18.04■□□□□ 0.48
CCDC9-205ENST00000600117 EPB42P16452 691 aa18.04■□□□□ 0.48
CCDC9-205ENST00000600117 ITIH1P19827 911 aa18.04■□□□□ 0.48
CCDC9-205ENST00000600117 VARSP26640 1264 aaKnown RBP18.04■□□□□ 0.48
CCDC9-205ENST00000600117 ALDH3A1P30838 453 aa18.04■□□□□ 0.48
CCDC9-205ENST00000600117 CCR8P51685 355 aa18.04■□□□□ 0.48
CCDC9-205ENST00000600117 SLC18A1P54219 525 aa18.04■□□□□ 0.48
CCDC9-205ENST00000600117 REEP5Q00765 189 aa18.04■□□□□ 0.48
CCDC9-205ENST00000600117 MC2RQ01718 297 aa18.04■□□□□ 0.48
CCDC9-205ENST00000600117 RELAQ04206 551 aa18.04■□□□□ 0.48
CCDC9-205ENST00000600117 GPR19Q15760 415 aa18.04■□□□□ 0.48
CCDC9-205ENST00000600117 DEFB110Q30KQ9 67 aa18.04■□□□□ 0.48
CCDC9-205ENST00000600117 C3orf38Q5JPI3 329 aa18.04■□□□□ 0.48
CCDC9-205ENST00000600117 TMTC4Q5T4D3 741 aa18.04■□□□□ 0.48
CCDC9-205ENST00000600117 FCRL4Q96PJ5 515 aa18.04■□□□□ 0.48
CCDC9-205ENST00000600117 MECRQ9BV79 373 aa18.04■□□□□ 0.48
CCDC9-205ENST00000600117 OR7A17O14581 309 aa18.03■□□□□ 0.48
CCDC9-205ENST00000600117 CLGNO14967 610 aa18.03■□□□□ 0.48
CCDC9-205ENST00000600117 BPGMP07738 259 aa18.03■□□□□ 0.48
CCDC9-205ENST00000600117 CTSBP07858 339 aa18.03■□□□□ 0.48
CCDC9-205ENST00000600117 EZRP15311 586 aaKnown RBP18.03■□□□□ 0.48
CCDC9-205ENST00000600117 CD22P20273 847 aa18.03■□□□□ 0.48
CCDC9-205ENST00000600117 CASP2P42575 452 aa18.03■□□□□ 0.48
CCDC9-205ENST00000600117 SERPINB4P48594 390 aa18.03■□□□□ 0.48
CCDC9-205ENST00000600117 PIK3CGP48736 1102 aa18.03■□□□□ 0.48
CCDC9-205ENST00000600117 CDH13P55290 713 aa18.03■□□□□ 0.48
CCDC9-205ENST00000600117 MEF2AQ02078 507 aaPredicted RBP18.03■□□□□ 0.48
CCDC9-205ENST00000600117 ACY1Q03154 408 aa18.03■□□□□ 0.48
CCDC9-205ENST00000600117 DOC2AQ14183 400 aa18.03■□□□□ 0.48
CCDC9-205ENST00000600117 LIPMQ5VYY2 423 aa18.03■□□□□ 0.48
CCDC9-205ENST00000600117 ATG9BQ674R7 924 aa18.03■□□□□ 0.48
CCDC9-205ENST00000600117 ADCK2Q7Z695 626 aa18.03■□□□□ 0.48
CCDC9-205ENST00000600117 PLD3Q8IV08 490 aa18.03■□□□□ 0.48
CCDC9-205ENST00000600117 ZNF740Q8NDX6 193 aa18.03■□□□□ 0.48
CCDC9-205ENST00000600117 ZNF501Q96CX3 271 aaPredicted RBP18.03■□□□□ 0.48
CCDC9-205ENST00000600117 SARGQ9BW04 601 aa18.03■□□□□ 0.48
CCDC9-205ENST00000600117 EHD1Q9H4M9 534 aa18.03■□□□□ 0.48
CCDC9-205ENST00000600117 GSTO2Q9H4Y5 243 aa18.03■□□□□ 0.48
CCDC9-205ENST00000600117 IPPKQ9H8X2 491 aa18.03■□□□□ 0.48
CCDC9-205ENST00000600117 APMAPQ9HDC9 416 aa18.03■□□□□ 0.48
CCDC9-205ENST00000600117 FBXO8Q9NRD0 319 aa18.03■□□□□ 0.48
CCDC9-205ENST00000600117 FGF21Q9NSA1 209 aa18.03■□□□□ 0.48
CCDC9-205ENST00000600117 PISDQ9UG56 409 aa18.03■□□□□ 0.48
CCDC9-205ENST00000600117 PLCL2Q9UPR0 1127 aa18.03■□□□□ 0.48
CCDC9-205ENST00000600117 ANGPTL3Q9Y5C1 460 aa18.03■□□□□ 0.48
CCDC9-205ENST00000600117 PCDHGA8Q9Y5G5 932 aa18.03■□□□□ 0.48
CCDC9-205ENST00000600117 HEMK1Q9Y5R4 338 aaPredicted RBP18.03■□□□□ 0.48
CCDC9-205ENST00000600117 MDC1Q14676 2089 aaKnown RBP18.03■□□□□ 0.48
CCDC9-205ENST00000600117 A0A0J9YVX5 310 aa18.02■□□□□ 0.48
CCDC9-205ENST00000600117 H3BMH7 237 aa18.02■□□□□ 0.48
CCDC9-205ENST00000600117 MAP3K7O43318 606 aa18.02■□□□□ 0.48
CCDC9-205ENST00000600117 TRIM13O60858 407 aa18.02■□□□□ 0.48
CCDC9-205ENST00000600117 WFS1O76024 890 aa18.02■□□□□ 0.48
CCDC9-205ENST00000600117 SUPT7LO94864 414 aa18.02■□□□□ 0.48
CCDC9-205ENST00000600117 NAGLUP54802 743 aa18.02■□□□□ 0.48
CCDC9-205ENST00000600117 WDR4P57081 412 aaKnown RBP18.02■□□□□ 0.48
CCDC9-205ENST00000600117 TRAF3Q13114 568 aa18.02■□□□□ 0.48
CCDC9-205ENST00000600117 CHIT1Q13231 466 aa18.02■□□□□ 0.48
CCDC9-205ENST00000600117 TUBB3Q13509 450 aa18.02■□□□□ 0.48
CCDC9-205ENST00000600117 SLBPQ14493 270 aaKnown RBP eCLIP18.02■□□□□ 0.48
CCDC9-205ENST00000600117 TBCCQ15814 346 aa18.02■□□□□ 0.48
CCDC9-205ENST00000600117 XKR6Q5GH73 641 aa18.02■□□□□ 0.48
CCDC9-205ENST00000600117 ZC3H12BQ5HYM0 836 aaKnown RBP18.02■□□□□ 0.48
CCDC9-205ENST00000600117 FRMPD2BQ6IN97 320 aa18.02■□□□□ 0.48
CCDC9-205ENST00000600117 MCATQ8IVS2 390 aaKnown RBP18.02■□□□□ 0.48
CCDC9-205ENST00000600117 ANKRD42Q8N9B4 389 aa18.02■□□□□ 0.48
CCDC9-205ENST00000600117 OR52B6Q8NGF0 335 aa18.02■□□□□ 0.48
CCDC9-205ENST00000600117 PMEPA1Q969W9 287 aa18.02■□□□□ 0.48
CCDC9-205ENST00000600117 ZNF285Q96NJ3 590 aa18.02■□□□□ 0.48
CCDC9-205ENST00000600117 OR2A5Q96R48 311 aa18.02■□□□□ 0.48
CCDC9-205ENST00000600117 OR6C1Q96RD1 312 aa18.02■□□□□ 0.48
CCDC9-205ENST00000600117 ZFYVE21Q9BQ24 234 aa18.02■□□□□ 0.48
CCDC9-205ENST00000600117 GATA5Q9BWX5 397 aaPredicted RBP18.02■□□□□ 0.48
CCDC9-205ENST00000600117 FAM117AQ9C073 453 aa18.02■□□□□ 0.48
CCDC9-205ENST00000600117 NOL11Q9H8H0 719 aaKnown RBP18.02■□□□□ 0.48
CCDC9-205ENST00000600117 SEMA4BQ9NPR2 832 aaPredicted RBP18.02■□□□□ 0.48
CCDC9-205ENST00000600117 GEMIN8Q9NWZ8 242 aaKnown RBP18.02■□□□□ 0.48
CCDC9-205ENST00000600117 MYO9AB2RTY4 2548 aa18.02■□□□□ 0.47
CCDC9-205ENST00000600117 LOC105369274A0A096LPK9 316 aa18.01■□□□□ 0.47
CCDC9-205ENST00000600117 LOC102723532A0A0G2JNH3 316 aa18.01■□□□□ 0.47
CCDC9-205ENST00000600117 A0A1B0GTL3 188 aa18.01■□□□□ 0.47
CCDC9-205ENST00000600117 TRBC2A0A5B9 178 aa18.01■□□□□ 0.47
CCDC9-205ENST00000600117 FEZF1A0PJY2 475 aa18.01■□□□□ 0.47
CCDC9-205ENST00000600117 PPP6CO00743 305 aa18.01■□□□□ 0.47
CCDC9-205ENST00000600117 LCMT2O60294 686 aaKnown RBP18.01■□□□□ 0.47
CCDC9-205ENST00000600117 KATNA1O75449 491 aa18.01■□□□□ 0.47
CCDC9-205ENST00000600117 JMJD7P0C870 316 aa18.01■□□□□ 0.47
CCDC9-205ENST00000600117 FGF5P12034 268 aa18.01■□□□□ 0.47
CCDC9-205ENST00000600117 TSPAN8P19075 237 aa18.01■□□□□ 0.47
CCDC9-205ENST00000600117 BCL6P41182 706 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms