RNA–Protein interactions for RNA: ENST00000600006.5

CHMP2A-205, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-205ENST00000600006 PRICKLE2Q7Z3G6 844 aa7.59□□□□□ -1.19
CHMP2A-205ENST00000600006 PTRH1Q86Y79 214 aaKnown RBP7.59□□□□□ -1.19
CHMP2A-205ENST00000600006 CTAGE3PQ8IX95 158 aa7.59□□□□□ -1.19
CHMP2A-205ENST00000600006 GSPT2Q8IYD1 628 aaKnown RBP7.59□□□□□ -1.19
CHMP2A-205ENST00000600006 MREGQ8N565 214 aa7.59□□□□□ -1.19
CHMP2A-205ENST00000600006 PPM1NQ8N819 430 aa7.59□□□□□ -1.19
CHMP2A-205ENST00000600006 OR4K1Q8NGD4 311 aa7.59□□□□□ -1.19
CHMP2A-205ENST00000600006 SLC5A11Q8WWX8 675 aa7.59□□□□□ -1.19
CHMP2A-205ENST00000600006 COL26A1Q96A83 441 aa7.59□□□□□ -1.19
CHMP2A-205ENST00000600006 ALKBH8Q96BT7 664 aaKnown RBP7.59□□□□□ -1.19
CHMP2A-205ENST00000600006 PYCR2Q96C36 320 aa7.59□□□□□ -1.19
CHMP2A-205ENST00000600006 TM4SF19Q96DZ7 209 aa7.59□□□□□ -1.19
CHMP2A-205ENST00000600006 FER1L6-AS2Q96M78 137 aa7.59□□□□□ -1.19
CHMP2A-205ENST00000600006 CCDC77Q9BR77 488 aa7.59□□□□□ -1.19
CHMP2A-205ENST00000600006 SLC25A23Q9BV35 468 aa7.59□□□□□ -1.19
CHMP2A-205ENST00000600006 DERL2Q9GZP9 239 aa7.59□□□□□ -1.19
CHMP2A-205ENST00000600006 CAB39LQ9H9S4 337 aa7.59□□□□□ -1.19
CHMP2A-205ENST00000600006 P4HTMQ9NXG6 502 aa7.59□□□□□ -1.19
CHMP2A-205ENST00000600006 CTNNAL1Q9UBT7 734 aa7.59□□□□□ -1.19
CHMP2A-205ENST00000600006 FETUBQ9UGM5 382 aa7.59□□□□□ -1.19
CHMP2A-205ENST00000600006 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.59□□□□□ -1.19
CHMP2A-205ENST00000600006 MRPS2Q9Y399 296 aaKnown RBP7.59□□□□□ -1.19
CHMP2A-205ENST00000600006 PCDHGB7Q9Y5F8 929 aa7.59□□□□□ -1.19
CHMP2A-205ENST00000600006 HS3ST3B1Q9Y662 390 aa7.59□□□□□ -1.19
CHMP2A-205ENST00000600006 IKBKGQ9Y6K9 419 aa7.59□□□□□ -1.19
CHMP2A-205ENST00000600006 MAU2Q9Y6X3 613 aa7.59□□□□□ -1.19
CHMP2A-205ENST00000600006 V9GYY5 206 aaPredicted RBP7.59□□□□□ -1.19
CHMP2A-205ENST00000600006 SPTA1P02549 2419 aa7.59□□□□□ -1.19
CHMP2A-205ENST00000600006 A0A0A6YYC8 382 aaPredicted RBP7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 EXOC1LA0A1B0GW35 172 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 TRBC2A0A5B9 178 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 H0YIG0 161 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 I3L1I5 382 aaPredicted RBP7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 J3QKU1 62 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 AGPSO00116 658 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 PEX12O00623 359 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 SOCS6O14544 535 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 CTIFO43310 598 aaKnown RBP7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 NSA2O95478 260 aaKnown RBP7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 INHBAP08476 426 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 ANXA5P08758 320 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 ZGLP1P0C6A0 271 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 CD1DP15813 335 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 CNTFP26441 200 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 GRK3P35626 688 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 SLC26A3P40879 764 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 CASRP41180 1078 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 BCL6P41182 706 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 SLC6A12P48065 614 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 HNMTP50135 292 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 SERPINB9P50453 376 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 CCL11P51671 97 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 CCR8P51685 355 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 PGDP52209 483 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 SOX8P57073 446 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 RAB10P61026 200 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 ATP6V0D1P61421 351 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 SNRPNP63162 240 aaKnown RBP7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 REEP5Q00765 189 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 OCA2Q04671 838 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 KLRB1Q12918 225 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 EFTUD2Q15029 972 aaKnown RBP eCLIP7.58□□□□□ -1.22e-6■■■■■ 35.7
CHMP2A-205ENST00000600006 NDUFA9Q16795 377 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 CATSPEREQ5SY80 951 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 TMEM214Q6NUQ4 689 aaKnown RBP7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 ASB18Q6ZVZ8 466 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 FRA10AC1Q70Z53 315 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 CCDC91Q7Z6B0 441 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 ASPGQ86U10 573 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 HPS6Q86YV9 775 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 TCAIMQ8N3R3 496 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 AMER3Q8N944 861 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 MFSD9Q8NBP5 474 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 CAMKVQ8NCB2 501 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 FDCSPQ8NFU4 85 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 MYRIPQ8NFW9 859 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 STT3BQ8TCJ2 826 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 UBLCP1Q8WVY7 318 aaPredicted RBP7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 SLC44A1Q8WWI5 657 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 NEIL2Q969S2 332 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 MIEF2Q96C03 454 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 UBXN10Q96LJ8 280 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 EGFL8Q99944 293 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 CRB3Q9BUF7 120 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 NUDT9Q9BW91 350 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 TGIF2Q9GZN2 237 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 DRC3Q9H069 523 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 SPNS1Q9H2V7 528 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 SOX17Q9H6I2 414 aaPredicted RBP7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 PELI2Q9HAT8 420 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 SEMA3GQ9NS98 782 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 C14orf105Q9NVL8 296 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 GPR83Q9NYM4 423 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 ZNF282Q9UDV7 671 aaPredicted RBP7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 ZNF180Q9UJW8 692 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 G3BP2Q9UN86 482 aaKnown RBP7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 MAP4K5Q9Y4K4 846 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 BAHCC1Q9P281 2608 aa7.58□□□□□ -1.2
CHMP2A-205ENST00000600006 A0A1W2PQ72 361 aa7.57□□□□□ -1.2
CHMP2A-205ENST00000600006 FEZF1A0PJY2 475 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms