RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 COX6A1P12074 109 aa17■□□□□ 0.31
CHMP2A-203ENST00000597209 GRK3P35626 688 aa17■□□□□ 0.31
CHMP2A-203ENST00000597209 RPL21P46778 160 aaKnown RBP17■□□□□ 0.31
CHMP2A-203ENST00000597209 FHL5Q5TD97 284 aa17■□□□□ 0.31
CHMP2A-203ENST00000597209 TMEM214Q6NUQ4 689 aaKnown RBP17■□□□□ 0.31
CHMP2A-203ENST00000597209 TMEM205Q6UW68 189 aa17■□□□□ 0.31
CHMP2A-203ENST00000597209 ISLR2Q6UXK2 745 aa17■□□□□ 0.31
CHMP2A-203ENST00000597209 ZC3HC1Q86WB0 502 aaKnown RBP17■□□□□ 0.31
CHMP2A-203ENST00000597209 ANKMY2Q8IV38 441 aa17■□□□□ 0.31
CHMP2A-203ENST00000597209 ZC3H7AQ8IWR0 971 aaKnown RBP17■□□□□ 0.31
CHMP2A-203ENST00000597209 KBTBD2Q8IY47 623 aa17■□□□□ 0.31
CHMP2A-203ENST00000597209 NKAPQ8N5F7 415 aaKnown RBP17■□□□□ 0.31
CHMP2A-203ENST00000597209 OR4K1Q8NGD4 311 aa17■□□□□ 0.31
CHMP2A-203ENST00000597209 DOCK10Q96BY6 2186 aa17■□□□□ 0.31
CHMP2A-203ENST00000597209 C8orf44Q96CB5 159 aa17■□□□□ 0.31
CHMP2A-203ENST00000597209 BARD1Q99728 777 aaKnown RBP17■□□□□ 0.31
CHMP2A-203ENST00000597209 MESP1Q9BRJ9 268 aa17■□□□□ 0.31
CHMP2A-203ENST00000597209 EPS8L2Q9H6S3 715 aa17■□□□□ 0.31
CHMP2A-203ENST00000597209 ZNF160Q9HCG1 818 aa17■□□□□ 0.31
CHMP2A-203ENST00000597209 SNX24Q9Y343 169 aa17■□□□□ 0.31
CHMP2A-203ENST00000597209 MRPS2Q9Y399 296 aaKnown RBP17■□□□□ 0.31
CHMP2A-203ENST00000597209 PCDHGA10Q9Y5H3 936 aa17■□□□□ 0.31
CHMP2A-203ENST00000597209 RELNP78509 3460 aa16.99■□□□□ 0.31
CHMP2A-203ENST00000597209 IGHV1-45A0A0A0MS14 117 aa16.99■□□□□ 0.31
CHMP2A-203ENST00000597209 NSG1A0A0A6YYJ2 146 aa16.99■□□□□ 0.31
CHMP2A-203ENST00000597209 TCP11X1B4DZS4 312 aa16.99■□□□□ 0.31
CHMP2A-203ENST00000597209 LCMT2O60294 686 aaKnown RBP16.99■□□□□ 0.31
CHMP2A-203ENST00000597209 BMP10O95393 424 aa16.99■□□□□ 0.31
CHMP2A-203ENST00000597209 ZNF37AP17032 561 aaPredicted RBP16.99■□□□□ 0.31
CHMP2A-203ENST00000597209 BCL6P41182 706 aa16.99■□□□□ 0.31
CHMP2A-203ENST00000597209 FASTKD3Q14CZ7 662 aaKnown RBP16.99■□□□□ 0.31
CHMP2A-203ENST00000597209 SBSNQ6UWP8 590 aa16.99■□□□□ 0.31
CHMP2A-203ENST00000597209 TMEM207Q6UWW9 146 aa16.99■□□□□ 0.31
CHMP2A-203ENST00000597209 MAATS1Q7Z4T9 603 aa16.99■□□□□ 0.31
CHMP2A-203ENST00000597209 STRA8Q7Z7C7 330 aa16.99■□□□□ 0.31
CHMP2A-203ENST00000597209 ASPGQ86U10 573 aa16.99■□□□□ 0.31
CHMP2A-203ENST00000597209 CUZD1Q86UP6 607 aa16.99■□□□□ 0.31
CHMP2A-203ENST00000597209 MFSD9Q8NBP5 474 aa16.99■□□□□ 0.31
CHMP2A-203ENST00000597209 ERP44Q9BS26 406 aa16.99■□□□□ 0.31
CHMP2A-203ENST00000597209 RIC8BQ9NVN3 520 aa16.99■□□□□ 0.31
CHMP2A-203ENST00000597209 WHRNQ9P202 907 aa16.99■□□□□ 0.31
CHMP2A-203ENST00000597209 PSAT1Q9Y617 370 aa16.99■□□□□ 0.31
CHMP2A-203ENST00000597209 SLC22A7Q9Y694 548 aa16.99■□□□□ 0.31
CHMP2A-203ENST00000597209 HECTD1Q9ULT8 2610 aa16.99■□□□□ 0.31
CHMP2A-203ENST00000597209 FAM95CA0A1B0GW59 222 aa16.98■□□□□ 0.31
CHMP2A-203ENST00000597209 FEZF1A0PJY2 475 aa16.98■□□□□ 0.31
CHMP2A-203ENST00000597209 FFAR3O14843 346 aa16.98■□□□□ 0.31
CHMP2A-203ENST00000597209 EIF3HO15372 352 aaKnown RBP eCLIP16.98■□□□□ 0.31
CHMP2A-203ENST00000597209 GPR42O15529 346 aa16.98■□□□□ 0.31
CHMP2A-203ENST00000597209 SERPINA7P05543 415 aa16.98■□□□□ 0.31
CHMP2A-203ENST00000597209 CDH1P12830 882 aa16.98■□□□□ 0.31
CHMP2A-203ENST00000597209 CCR8P51685 355 aa16.98■□□□□ 0.31
CHMP2A-203ENST00000597209 PGGT1BP53609 377 aa16.98■□□□□ 0.31
CHMP2A-203ENST00000597209 AP2B1P63010 937 aa16.98■□□□□ 0.31
CHMP2A-203ENST00000597209 SNRPNP63162 240 aaKnown RBP16.98■□□□□ 0.31
CHMP2A-203ENST00000597209 MAT1AQ00266 395 aaKnown RBP16.98■□□□□ 0.31
CHMP2A-203ENST00000597209 MFAP5Q13361 173 aa16.98■□□□□ 0.31
CHMP2A-203ENST00000597209 PPP1R3AQ16821 1122 aa16.98■□□□□ 0.31
CHMP2A-203ENST00000597209 SYT16Q17RD7 645 aa16.98■□□□□ 0.31
CHMP2A-203ENST00000597209 RIPOR1Q6ZS17 1223 aa16.98■□□□□ 0.31
CHMP2A-203ENST00000597209 ZBED8Q8IZ13 594 aa16.98■□□□□ 0.31
CHMP2A-203ENST00000597209 CISD2Q8N5K1 135 aaKnown RBP16.98■□□□□ 0.31
CHMP2A-203ENST00000597209 SPATA4Q8NEY3 305 aa16.98■□□□□ 0.31
CHMP2A-203ENST00000597209 OR9A4Q8NGU2 314 aa16.98■□□□□ 0.31
CHMP2A-203ENST00000597209 DNAJB14Q8TBM8 379 aa16.98■□□□□ 0.31
CHMP2A-203ENST00000597209 SLC13A3Q8WWT9 602 aa16.98■□□□□ 0.31
CHMP2A-203ENST00000597209 ALKBH8Q96BT7 664 aaKnown RBP16.98■□□□□ 0.31
CHMP2A-203ENST00000597209 PYCR2Q96C36 320 aa16.98■□□□□ 0.31
CHMP2A-203ENST00000597209 C19orf60Q96EN9 201 aa16.98■□□□□ 0.31
CHMP2A-203ENST00000597209 OR4K3Q96R72 315 aa16.98■□□□□ 0.31
CHMP2A-203ENST00000597209 MCMBPQ9BTE3 642 aa16.98■□□□□ 0.31
CHMP2A-203ENST00000597209 ZNF700Q9H0M5 742 aa16.98■□□□□ 0.31
CHMP2A-203ENST00000597209 POPDC3Q9HBV1 291 aa16.98■□□□□ 0.31
CHMP2A-203ENST00000597209 ASF1BQ9NVP2 202 aa16.98■□□□□ 0.31
CHMP2A-203ENST00000597209 MKL2Q9ULH7 1088 aa16.98■□□□□ 0.31
CHMP2A-203ENST00000597209 PTPN13Q12923 2485 aa16.98■□□□□ 0.31
CHMP2A-203ENST00000597209 TRBC2A0A5B9 178 aa16.97■□□□□ 0.31
CHMP2A-203ENST00000597209 KLHL18O94889 574 aa16.97■□□□□ 0.31
CHMP2A-203ENST00000597209 SLC35G6P0C7Q6 338 aa16.97■□□□□ 0.31
CHMP2A-203ENST00000597209 PRR35P0CG20 571 aa16.97■□□□□ 0.31
CHMP2A-203ENST00000597209 ICAM2P13598 275 aa16.97■□□□□ 0.31
CHMP2A-203ENST00000597209 SOX11P35716 441 aa16.97■□□□□ 0.31
CHMP2A-203ENST00000597209 TSFMP43897 325 aaKnown RBP16.97■□□□□ 0.31
CHMP2A-203ENST00000597209 CDKL1Q00532 357 aa16.97■□□□□ 0.31
CHMP2A-203ENST00000597209 CALCOCO2Q13137 446 aa16.97■□□□□ 0.31
CHMP2A-203ENST00000597209 B3GNTL1Q67FW5 361 aaPredicted RBP16.97■□□□□ 0.31
CHMP2A-203ENST00000597209 CYS1Q717R9 158 aa16.97■□□□□ 0.31
CHMP2A-203ENST00000597209 TBC1D19Q8N5T2 526 aa16.97■□□□□ 0.31
CHMP2A-203ENST00000597209 OR51Q1Q8NH59 317 aa16.97■□□□□ 0.31
CHMP2A-203ENST00000597209 PSMF1Q92530 271 aa16.97■□□□□ 0.31
CHMP2A-203ENST00000597209 VPS39Q96JC1 886 aa16.97■□□□□ 0.31
CHMP2A-203ENST00000597209 PSMG3-AS1Q96PY0 264 aa16.97■□□□□ 0.31
CHMP2A-203ENST00000597209 RHOJQ9H4E5 214 aa16.97■□□□□ 0.31
CHMP2A-203ENST00000597209 ANKHQ9HCJ1 492 aa16.97■□□□□ 0.31
CHMP2A-203ENST00000597209 MAP10Q9P2G4 905 aa16.97■□□□□ 0.31
CHMP2A-203ENST00000597209 IKZF3Q9UKT9 509 aa16.97■□□□□ 0.31
CHMP2A-203ENST00000597209 COPG1Q9Y678 874 aaKnown RBP16.97■□□□□ 0.31
CHMP2A-203ENST00000597209 CBX6O95503 412 aa16.96■□□□□ 0.31
CHMP2A-203ENST00000597209 GUCA1CO95843 209 aa16.96■□□□□ 0.31
CHMP2A-203ENST00000597209 STATHP02808 62 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms