RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 ANGPTL3Q9Y5C1 460 aa18.46■□□□□ 0.55
PNKP-207ENST00000596014 PCDHGA4Q9Y5G9 962 aa18.46■□□□□ 0.55
PNKP-207ENST00000596014 TEX51A0A1B0GUA7 166 aa18.45■□□□□ 0.54
PNKP-207ENST00000596014 TRBC2A0A5B9 178 aa18.45■□□□□ 0.54
PNKP-207ENST00000596014 TAF4O00268 1085 aa18.45■□□□□ 0.54
PNKP-207ENST00000596014 OR1F1O43749 312 aa18.45■□□□□ 0.54
PNKP-207ENST00000596014 CPNE3O75131 537 aaKnown RBP18.45■□□□□ 0.54
PNKP-207ENST00000596014 SPAG7O75391 227 aa18.45■□□□□ 0.54
PNKP-207ENST00000596014 LIPCP11150 499 aa18.45■□□□□ 0.54
PNKP-207ENST00000596014 LSP1P33241 339 aa18.45■□□□□ 0.54
PNKP-207ENST00000596014 BCL6P41182 706 aa18.45■□□□□ 0.54
PNKP-207ENST00000596014 NFKB2Q00653 900 aa18.45■□□□□ 0.54
PNKP-207ENST00000596014 XKR6Q5GH73 641 aa18.45■□□□□ 0.54
PNKP-207ENST00000596014 EXOC3L1Q86VI1 746 aa18.45■□□□□ 0.54
PNKP-207ENST00000596014 PROSER1Q86XN7 944 aa18.45■□□□□ 0.54
PNKP-207ENST00000596014 GALNT6Q8NCL4 622 aa18.45■□□□□ 0.54
PNKP-207ENST00000596014 ZNF248Q8NDW4 579 aa18.45■□□□□ 0.54
PNKP-207ENST00000596014 THAP11Q96EK4 314 aa18.45■□□□□ 0.54
PNKP-207ENST00000596014 AIF1LQ9BQI0 150 aa18.45■□□□□ 0.54
PNKP-207ENST00000596014 SLC7A5P2Q9GIP4 190 aa18.45■□□□□ 0.54
PNKP-207ENST00000596014 IQCGQ9H095 443 aaKnown RBP18.45■□□□□ 0.54
PNKP-207ENST00000596014 FER1L5A0AVI2 2057 aa18.45■□□□□ 0.54
PNKP-207ENST00000596014 FITM1A5D6W6 292 aa18.44■□□□□ 0.54
PNKP-207ENST00000596014 G3V2L1 256 aa18.44■□□□□ 0.54
PNKP-207ENST00000596014 H2AFYO75367 372 aaKnown RBP18.44■□□□□ 0.54
PNKP-207ENST00000596014 WFS1O76024 890 aa18.44■□□□□ 0.54
PNKP-207ENST00000596014 GCGRP47871 477 aa18.44■□□□□ 0.54
PNKP-207ENST00000596014 REEP5Q00765 189 aa18.44■□□□□ 0.54
PNKP-207ENST00000596014 IRF8Q02556 426 aa18.44■□□□□ 0.54
PNKP-207ENST00000596014 PCDH1Q08174 1060 aa18.44■□□□□ 0.54
PNKP-207ENST00000596014 GTF2H2Q13888 395 aa18.44■□□□□ 0.54
PNKP-207ENST00000596014 GRM7Q14831 915 aa18.44■□□□□ 0.54
PNKP-207ENST00000596014 TGIF1Q15583 401 aa18.44■□□□□ 0.54
PNKP-207ENST00000596014 GTF2H2CQ6P1K8 395 aa18.44■□□□□ 0.54
PNKP-207ENST00000596014 VN1R4Q7Z5H5 301 aa18.44■□□□□ 0.54
PNKP-207ENST00000596014 NLGN4XQ8N0W4 816 aa18.44■□□□□ 0.54
PNKP-207ENST00000596014 TBC1D19Q8N5T2 526 aa18.44■□□□□ 0.54
PNKP-207ENST00000596014 CSNK1A1LQ8N752 337 aa18.44■□□□□ 0.54
PNKP-207ENST00000596014 MFSD9Q8NBP5 474 aa18.44■□□□□ 0.54
PNKP-207ENST00000596014 NLGN4YQ8NFZ3 816 aaPredicted RBP18.44■□□□□ 0.54
PNKP-207ENST00000596014 CLIP3Q96DZ5 547 aa18.44■□□□□ 0.54
PNKP-207ENST00000596014 WDR34Q96EX3 536 aa18.44■□□□□ 0.54
PNKP-207ENST00000596014 NDC1Q9BTX1 674 aa18.44■□□□□ 0.54
PNKP-207ENST00000596014 PCTPQ9UKL6 214 aa18.44■□□□□ 0.54
PNKP-207ENST00000596014 SRRM3A6NNA2 597 aaPredicted RBP18.44■□□□□ 0.54
PNKP-207ENST00000596014 HBQ1P09105 142 aa18.44■□□□□ 0.54
PNKP-207ENST00000596014 CXCR2P25025 360 aa18.44■□□□□ 0.54
PNKP-207ENST00000596014 CASP2P42575 452 aa18.44■□□□□ 0.54
PNKP-207ENST00000596014 PIK3CGP48736 1102 aa18.44■□□□□ 0.54
PNKP-207ENST00000596014 PRKAA2P54646 552 aa18.44■□□□□ 0.54
PNKP-207ENST00000596014 HERVK_113P63132 956 aa18.44■□□□□ 0.54
PNKP-207ENST00000596014 CHIT1Q13231 466 aa18.44■□□□□ 0.54
PNKP-207ENST00000596014 COL9A2Q14055 689 aaPredicted RBP18.44■□□□□ 0.54
PNKP-207ENST00000596014 DOC2AQ14183 400 aa18.44■□□□□ 0.54
PNKP-207ENST00000596014 E2F2Q14209 437 aa18.44■□□□□ 0.54
PNKP-207ENST00000596014 TBCCQ15814 346 aa18.44■□□□□ 0.54
PNKP-207ENST00000596014 HKDC1Q2TB90 917 aa18.44■□□□□ 0.54
PNKP-207ENST00000596014 PRTGQ2VWP7 1150 aa18.44■□□□□ 0.54
PNKP-207ENST00000596014 C6orf15Q6UXA7 325 aaPredicted RBP18.44■□□□□ 0.54
PNKP-207ENST00000596014 ZYG11AQ6WRX3 759 aa18.44■□□□□ 0.54
PNKP-207ENST00000596014 GOLGA7Q7Z5G4 137 aa18.44■□□□□ 0.54
PNKP-207ENST00000596014 SLC22A9Q8IVM8 553 aa18.44■□□□□ 0.54
PNKP-207ENST00000596014 NKD1Q969G9 470 aa18.44■□□□□ 0.54
PNKP-207ENST00000596014 NAF1Q96HR8 494 aaKnown RBP18.44■□□□□ 0.54
PNKP-207ENST00000596014 LRFN5Q96NI6 719 aa18.44■□□□□ 0.54
PNKP-207ENST00000596014 C1QTNF3Q9BXJ4 246 aa18.44■□□□□ 0.54
PNKP-207ENST00000596014 ERVK-6Q9BXR3 956 aa18.44■□□□□ 0.54
PNKP-207ENST00000596014 IPPKQ9H8X2 491 aa18.44■□□□□ 0.54
PNKP-207ENST00000596014 RAXQ9Y2V3 346 aa18.44■□□□□ 0.54
PNKP-207ENST00000596014 RAD1O60671 282 aa18.43■□□□□ 0.54
PNKP-207ENST00000596014 KATNA1O75449 491 aa18.43■□□□□ 0.54
PNKP-207ENST00000596014 RPS17P08708 135 aaKnown RBP18.43■□□□□ 0.54
PNKP-207ENST00000596014 MYL2P10916 166 aa18.43■□□□□ 0.54
PNKP-207ENST00000596014 EIF2S3P41091 472 aaKnown RBP18.43■□□□□ 0.54
PNKP-207ENST00000596014 SCTRP47872 440 aa18.43■□□□□ 0.54
PNKP-207ENST00000596014 CLN3Q13286 438 aa18.43■□□□□ 0.54
PNKP-207ENST00000596014 MAP7Q14244 749 aa18.43■□□□□ 0.54
PNKP-207ENST00000596014 SLBPQ14493 270 aaKnown RBP eCLIP18.43■□□□□ 0.54
PNKP-207ENST00000596014 RBBP5Q15291 538 aaKnown RBP18.43■□□□□ 0.54
PNKP-207ENST00000596014 FAM214AQ32MH5 1076 aa18.43■□□□□ 0.54
PNKP-207ENST00000596014 RHBDD2Q6NTF9 364 aa18.43■□□□□ 0.54
PNKP-207ENST00000596014 ESX1Q8N693 406 aa18.43■□□□□ 0.54
PNKP-207ENST00000596014 CCDC63Q8NA47 563 aa18.43■□□□□ 0.54
PNKP-207ENST00000596014 TTC29Q8NA56 475 aaPredicted RBP18.43■□□□□ 0.54
PNKP-207ENST00000596014 RDH11Q8TC12 318 aa18.43■□□□□ 0.54
PNKP-207ENST00000596014 TCP10LQ8TDR4 215 aa18.43■□□□□ 0.54
PNKP-207ENST00000596014 KCNE4Q8WWG9 221 aa18.43■□□□□ 0.54
PNKP-207ENST00000596014 TM4SF19Q96DZ7 209 aa18.43■□□□□ 0.54
PNKP-207ENST00000596014 PTCD3Q96EY7 689 aaKnown RBP18.43■□□□□ 0.54
PNKP-207ENST00000596014 CNTNAP3BQ96NU0 1288 aa18.43■□□□□ 0.54
PNKP-207ENST00000596014 CNTNAP3Q9BZ76 1288 aa18.43■□□□□ 0.54
PNKP-207ENST00000596014 SRPK3Q9UPE1 567 aa18.43■□□□□ 0.54
PNKP-207ENST00000596014 HYKKA2RU49 373 aa18.42■□□□□ 0.54
PNKP-207ENST00000596014 TXNDC9O14530 226 aa18.42■□□□□ 0.54
PNKP-207ENST00000596014 P2RX6O15547 441 aa18.42■□□□□ 0.54
PNKP-207ENST00000596014 TYROBPO43914 113 aa18.42■□□□□ 0.54
PNKP-207ENST00000596014 STATHP02808 62 aa18.42■□□□□ 0.54
PNKP-207ENST00000596014 CPA3P15088 417 aa18.42■□□□□ 0.54
PNKP-207ENST00000596014 CD22P20273 847 aa18.42■□□□□ 0.54
PNKP-207ENST00000596014 IMPDH1P20839 514 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms