RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 PFN3P60673 137 aa15.94■□□□□ 0.14
LIG1-206ENST00000594067 SRSF11Q05519 484 aaKnown RBP15.94■□□□□ 0.14
LIG1-206ENST00000594067 ATAD3BQ5T9A4 648 aa15.94■□□□□ 0.14
LIG1-206ENST00000594067 KIAA1614Q5VZ46 1190 aa15.94■□□□□ 0.14
LIG1-206ENST00000594067 TPGS2Q68CL5 300 aa15.94■□□□□ 0.14
LIG1-206ENST00000594067 AHSA2Q719I0 299 aa15.94■□□□□ 0.14
LIG1-206ENST00000594067 TSPYL5Q86VY4 417 aaPredicted RBP15.94■□□□□ 0.14
LIG1-206ENST00000594067 SH3KBP1Q96B97 665 aa15.94■□□□□ 0.14
LIG1-206ENST00000594067 TXNDC15Q96J42 360 aa15.94■□□□□ 0.14
LIG1-206ENST00000594067 EHD1Q9H4M9 534 aa15.94■□□□□ 0.14
LIG1-206ENST00000594067 SUV39H2Q9H5I1 410 aa15.94■□□□□ 0.14
LIG1-206ENST00000594067 ZDHHC6Q9H6R6 413 aa15.94■□□□□ 0.14
LIG1-206ENST00000594067 EIF2S1P05198 315 aaKnown RBP15.94■□□□□ 0.14
LIG1-206ENST00000594067 AQP1P29972 269 aa15.94■□□□□ 0.14
LIG1-206ENST00000594067 PTPN5P54829 565 aa15.94■□□□□ 0.14
LIG1-206ENST00000594067 SNRPD1P62314 119 aaKnown RBP15.94■□□□□ 0.14
LIG1-206ENST00000594067 RPP38P78345 283 aaKnown RBP15.94■□□□□ 0.14
LIG1-206ENST00000594067 CREMQ03060 361 aa15.94■□□□□ 0.14
LIG1-206ENST00000594067 SPOUT1Q5T280 376 aaKnown RBP15.94■□□□□ 0.14
LIG1-206ENST00000594067 ERICH5Q6P6B1 374 aa15.94■□□□□ 0.14
LIG1-206ENST00000594067 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.94■□□□□ 0.148e-7■□□□□ 9.2
LIG1-206ENST00000594067 Q6ZPB1 254 aaPredicted RBP15.94■□□□□ 0.14
LIG1-206ENST00000594067 HOMEZQ8IX15 550 aa15.94■□□□□ 0.14
LIG1-206ENST00000594067 DCSTAMPQ9H295 470 aa15.94■□□□□ 0.14
LIG1-206ENST00000594067 CCNB1IP1Q9NPC3 277 aa15.94■□□□□ 0.14
LIG1-206ENST00000594067 CFAP97Q9P2B7 532 aa15.94■□□□□ 0.14
LIG1-206ENST00000594067 LSM7Q9UK45 103 aaKnown RBP15.94■□□□□ 0.14
LIG1-206ENST00000594067 IGLV3-16A0A075B6K0 115 aa15.93■□□□□ 0.14
LIG1-206ENST00000594067 WBP4O75554 376 aaKnown RBP15.93■□□□□ 0.14
LIG1-206ENST00000594067 KCNK2O95069 426 aa15.93■□□□□ 0.14
LIG1-206ENST00000594067 ATP1B2P14415 290 aaPredicted RBP15.93■□□□□ 0.14
LIG1-206ENST00000594067 EPHB3P54753 998 aa15.93■□□□□ 0.14
LIG1-206ENST00000594067 CCL23P55773 120 aa15.93■□□□□ 0.14
LIG1-206ENST00000594067 SP3Q02447 781 aa15.93■□□□□ 0.14
LIG1-206ENST00000594067 NPRL3Q12980 569 aa15.93■□□□□ 0.14
LIG1-206ENST00000594067 XKR6Q5GH73 641 aa15.93■□□□□ 0.14
LIG1-206ENST00000594067 PGBD3Q8N328 593 aa15.93■□□□□ 0.14
LIG1-206ENST00000594067 TPT1P8Q9HAU6 139 aa15.93■□□□□ 0.14
LIG1-206ENST00000594067 IL21Q9HBE4 155 aa15.93■□□□□ 0.14
LIG1-206ENST00000594067 ANKHQ9HCJ1 492 aa15.93■□□□□ 0.14
LIG1-206ENST00000594067 VPS29Q9UBQ0 182 aa15.93■□□□□ 0.14
LIG1-206ENST00000594067 B4GALT6Q9UBX8 382 aa15.93■□□□□ 0.14
LIG1-206ENST00000594067 KLHL3Q9UH77 587 aa15.93■□□□□ 0.14
LIG1-206ENST00000594067 ZNF106Q9H2Y7 1883 aaKnown RBP15.93■□□□□ 0.14
LIG1-206ENST00000594067 NPIPB8E9PQR5 432 aa15.93■□□□□ 0.14
LIG1-206ENST00000594067 GFYI3L273 518 aa15.93■□□□□ 0.14
LIG1-206ENST00000594067 EIF3FO00303 357 aaPredicted RBP15.93■□□□□ 0.14
LIG1-206ENST00000594067 PCDHGA12O60330 932 aa15.93■□□□□ 0.14
LIG1-206ENST00000594067 MRPS14O60783 128 aaKnown RBP15.93■□□□□ 0.14
LIG1-206ENST00000594067 CKMP06732 381 aa15.93■□□□□ 0.14
LIG1-206ENST00000594067 MPC1LP0DKB6 136 aa15.93■□□□□ 0.14
LIG1-206ENST00000594067 ZNF404Q494X3 552 aa15.93■□□□□ 0.14
LIG1-206ENST00000594067 STEAP3Q658P3 488 aa15.93■□□□□ 0.14
LIG1-206ENST00000594067 FAM217AQ8IXS0 508 aa15.93■□□□□ 0.14
LIG1-206ENST00000594067 MAL2Q969L2 176 aa15.93■□□□□ 0.14
LIG1-206ENST00000594067 MMP27Q9H306 513 aa15.93■□□□□ 0.14
LIG1-206ENST00000594067 ZBTB20Q9HC78 741 aaPredicted RBP15.93■□□□□ 0.14
LIG1-206ENST00000594067 ABT1Q9ULW3 272 aaKnown RBP15.93■□□□□ 0.14
LIG1-206ENST00000594067 ZNF451Q9Y4E5 1061 aa15.93■□□□□ 0.14
LIG1-206ENST00000594067 UGT2A1Q9Y4X1 527 aa15.93■□□□□ 0.14
LIG1-206ENST00000594067 TBX1O43435 398 aa15.92■□□□□ 0.14
LIG1-206ENST00000594067 SOD2P04179 222 aa15.92■□□□□ 0.14
LIG1-206ENST00000594067 S100A1P23297 94 aa15.92■□□□□ 0.14
LIG1-206ENST00000594067 LIPAP38571 399 aa15.92■□□□□ 0.14
LIG1-206ENST00000594067 ITGA1P56199 1179 aa15.92■□□□□ 0.14
LIG1-206ENST00000594067 SYT16Q17RD7 645 aa15.92■□□□□ 0.14
LIG1-206ENST00000594067 ADNP2Q6IQ32 1131 aa15.92■□□□□ 0.14
LIG1-206ENST00000594067 CCDC80Q76M96 950 aa15.92■□□□□ 0.14
LIG1-206ENST00000594067 GPR155Q7Z3F1 870 aa15.92■□□□□ 0.14
LIG1-206ENST00000594067 DEFB128Q7Z7B8 93 aa15.92■□□□□ 0.14
LIG1-206ENST00000594067 APH1BQ8WW43 257 aa15.92■□□□□ 0.14
LIG1-206ENST00000594067 ELMO1Q92556 727 aa15.92■□□□□ 0.14
LIG1-206ENST00000594067 FOXJ1Q92949 421 aa15.92■□□□□ 0.14
LIG1-206ENST00000594067 FCRL1Q96LA6 429 aa15.92■□□□□ 0.14
LIG1-206ENST00000594067 FAM120CQ9NX05 1096 aaKnown RBP15.92■□□□□ 0.14
LIG1-206ENST00000594067 SPATA7Q9P0W8 599 aa15.92■□□□□ 0.14
LIG1-206ENST00000594067 SRRDQ9UH36 339 aa15.92■□□□□ 0.14
LIG1-206ENST00000594067 FZD4Q9ULV1 537 aa15.92■□□□□ 0.14
LIG1-206ENST00000594067 IFT52Q9Y366 437 aa15.92■□□□□ 0.14
LIG1-206ENST00000594067 INSL5Q9Y5Q6 135 aa15.92■□□□□ 0.14
LIG1-206ENST00000594067 MICAL3Q7RTP6 2002 aa15.92■□□□□ 0.14
LIG1-206ENST00000594067 METTL15A6NJ78 407 aa15.92■□□□□ 0.14
LIG1-206ENST00000594067 E7EQ34 232 aa15.92■□□□□ 0.14
LIG1-206ENST00000594067 RFPL2O75678 378 aa15.92■□□□□ 0.14
LIG1-206ENST00000594067 VIPP01282 170 aa15.92■□□□□ 0.14
LIG1-206ENST00000594067 GABRR2P28476 465 aa15.92■□□□□ 0.14
LIG1-206ENST00000594067 SPINT3P49223 89 aa15.92■□□□□ 0.14
LIG1-206ENST00000594067 SEPHS1P49903 392 aa15.92■□□□□ 0.14
LIG1-206ENST00000594067 ABRQ12979 859 aa15.92■□□□□ 0.14
LIG1-206ENST00000594067 CAMK2GQ13555 558 aaPredicted RBP15.92■□□□□ 0.14
LIG1-206ENST00000594067 LRIT3Q3SXY7 679 aa15.92■□□□□ 0.14
LIG1-206ENST00000594067 COLEC12Q5KU26 742 aa15.92■□□□□ 0.14
LIG1-206ENST00000594067 ZNF648Q5T619 568 aaPredicted RBP15.92■□□□□ 0.14
LIG1-206ENST00000594067 UBE2UQ5VVX9 321 aa15.92■□□□□ 0.14
LIG1-206ENST00000594067 GPR153Q6NV75 609 aa15.92■□□□□ 0.14
LIG1-206ENST00000594067 AKAP14Q86UN6 197 aa15.92■□□□□ 0.14
LIG1-206ENST00000594067 ENTHD1Q8IYW4 607 aa15.92■□□□□ 0.14
LIG1-206ENST00000594067 HS6ST3Q8IZP7 471 aa15.92■□□□□ 0.14
LIG1-206ENST00000594067 CMTM8Q8IZV2 173 aa15.92■□□□□ 0.14
LIG1-206ENST00000594067 SYNPOQ8N3V7 929 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms