RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 SEC31AO94979 1220 aaKnown RBP12.54□□□□□ -0.4
H3F3B-213ENST00000593254 TSPAN12O95859 305 aa12.54□□□□□ -0.4
H3F3B-213ENST00000593254 HRH2P25021 359 aa12.54□□□□□ -0.4
H3F3B-213ENST00000593254 ITGA3P26006 1051 aa12.54□□□□□ -0.4
H3F3B-213ENST00000593254 ITGA8P53708 1063 aa12.54□□□□□ -0.4
H3F3B-213ENST00000593254 DSG2Q14126 1118 aa12.54□□□□□ -0.4
H3F3B-213ENST00000593254 HIF1AQ16665 826 aa12.54□□□□□ -0.4
H3F3B-213ENST00000593254 TUBB8Q3ZCM7 444 aa12.54□□□□□ -0.4
H3F3B-213ENST00000593254 VWA2Q5GFL6 755 aa12.54□□□□□ -0.4
H3F3B-213ENST00000593254 TRMT10BQ6PF06 316 aaKnown RBP12.54□□□□□ -0.4
H3F3B-213ENST00000593254 ADCK2Q7Z695 626 aa12.54□□□□□ -0.4
H3F3B-213ENST00000593254 PLD3Q8IV08 490 aa12.54□□□□□ -0.4
H3F3B-213ENST00000593254 MYO1HQ8N1T3 1032 aa12.54□□□□□ -0.4
H3F3B-213ENST00000593254 AMER3Q8N944 861 aa12.54□□□□□ -0.4
H3F3B-213ENST00000593254 ANP32BQ92688 251 aaKnown RBP12.54□□□□□ -0.4
H3F3B-213ENST00000593254 LINGO1Q96FE5 620 aa12.54□□□□□ -0.4
H3F3B-213ENST00000593254 VPS50Q96JG6 964 aa12.54□□□□□ -0.4
H3F3B-213ENST00000593254 PRAP1Q96NZ9 151 aa12.54□□□□□ -0.4
H3F3B-213ENST00000593254 MESP1Q9BRJ9 268 aa12.54□□□□□ -0.4
H3F3B-213ENST00000593254 TRIM51Q9BSJ1 452 aa12.54□□□□□ -0.4
H3F3B-213ENST00000593254 PCBD2Q9H0N5 130 aa12.54□□□□□ -0.4
H3F3B-213ENST00000593254 PARVBQ9HBI1 364 aa12.54□□□□□ -0.4
H3F3B-213ENST00000593254 TMEM184CQ9NVA4 438 aa12.54□□□□□ -0.4
H3F3B-213ENST00000593254 CORO1CQ9ULV4 474 aaPredicted RBP12.54□□□□□ -0.4
H3F3B-213ENST00000593254 PYCARDQ9ULZ3 195 aa12.54□□□□□ -0.4
H3F3B-213ENST00000593254 PCDHGA10Q9Y5H3 936 aa12.54□□□□□ -0.4
H3F3B-213ENST00000593254 COPG1Q9Y678 874 aaKnown RBP12.54□□□□□ -0.4
H3F3B-213ENST00000593254 ZNF469Q96JG9 3925 aaPredicted RBP12.54□□□□□ -0.4
H3F3B-213ENST00000593254 TTI1O43156 1089 aa12.53□□□□□ -0.4
H3F3B-213ENST00000593254 PRPF4O43172 522 aaKnown RBP eCLIP12.53□□□□□ -0.42e-7■■□□□ 13.3
H3F3B-213ENST00000593254 LRRTM2O43300 516 aa12.53□□□□□ -0.4
H3F3B-213ENST00000593254 FOXS1O43638 330 aa12.53□□□□□ -0.4
H3F3B-213ENST00000593254 FDXRP22570 491 aa12.53□□□□□ -0.4
H3F3B-213ENST00000593254 SLC26A3P40879 764 aa12.53□□□□□ -0.4
H3F3B-213ENST00000593254 ARL4CP56559 192 aa12.53□□□□□ -0.4
H3F3B-213ENST00000593254 FAM53BQ14153 422 aa12.53□□□□□ -0.4
H3F3B-213ENST00000593254 FRG1Q14331 258 aaKnown RBP12.53□□□□□ -0.4
H3F3B-213ENST00000593254 PHKG1Q16816 387 aa12.53□□□□□ -0.4
H3F3B-213ENST00000593254 HP1BP3Q5SSJ5 553 aaPredicted RBP12.53□□□□□ -0.4
H3F3B-213ENST00000593254 ATG9BQ674R7 924 aa12.53□□□□□ -0.4
H3F3B-213ENST00000593254 AGTRAPQ6RW13 159 aa12.53□□□□□ -0.4
H3F3B-213ENST00000593254 MBOAT1Q6ZNC8 495 aa12.53□□□□□ -0.4
H3F3B-213ENST00000593254 Q6ZS92 163 aa12.53□□□□□ -0.4
H3F3B-213ENST00000593254 VN1R4Q7Z5H5 301 aa12.53□□□□□ -0.4
H3F3B-213ENST00000593254 LAPTM4BQ86VI4 370 aa12.53□□□□□ -0.4
H3F3B-213ENST00000593254 PALM2Q8IXS6 379 aa12.53□□□□□ -0.4
H3F3B-213ENST00000593254 PRSS58Q8IYP2 241 aa12.53□□□□□ -0.4
H3F3B-213ENST00000593254 TM9SF4Q92544 642 aa12.53□□□□□ -0.4
H3F3B-213ENST00000593254 CFAP36Q96G28 342 aa12.53□□□□□ -0.4
H3F3B-213ENST00000593254 SNF8Q96H20 258 aa12.53□□□□□ -0.4
H3F3B-213ENST00000593254 DRC3Q9H069 523 aa12.53□□□□□ -0.4
H3F3B-213ENST00000593254 ILKAPQ9H0C8 392 aaPredicted RBP12.53□□□□□ -0.4
H3F3B-213ENST00000593254 ZBTB20Q9HC78 741 aaPredicted RBP12.53□□□□□ -0.4
H3F3B-213ENST00000593254 PPANQ9NQ55 473 aaKnown RBP12.53□□□□□ -0.4
H3F3B-213ENST00000593254 C14orf105Q9NVL8 296 aa12.53□□□□□ -0.4
H3F3B-213ENST00000593254 TRPC4Q9UBN4 977 aa12.53□□□□□ -0.4
H3F3B-213ENST00000593254 RNF14Q9UBS8 474 aa12.53□□□□□ -0.4
H3F3B-213ENST00000593254 C3orf18Q9UK00 162 aa12.53□□□□□ -0.4
H3F3B-213ENST00000593254 SH2B3Q9UQQ2 575 aa12.53□□□□□ -0.4
H3F3B-213ENST00000593254 KCNE1BA0A087WTH5 132 aa12.52□□□□□ -0.41
H3F3B-213ENST00000593254 A0A1W2PQ72 361 aa12.52□□□□□ -0.41
H3F3B-213ENST00000593254 E7ESA3 106 aa12.52□□□□□ -0.41
H3F3B-213ENST00000593254 HPP00738 406 aa12.52□□□□□ -0.41
H3F3B-213ENST00000593254 ACPPP15309 386 aa12.52□□□□□ -0.41
H3F3B-213ENST00000593254 CCND1P24385 295 aa12.52□□□□□ -0.41
H3F3B-213ENST00000593254 PAFAH1B1P43034 410 aa12.52□□□□□ -0.41
H3F3B-213ENST00000593254 PER3P56645 1201 aa12.52□□□□□ -0.41
H3F3B-213ENST00000593254 IL2P60568 153 aa12.52□□□□□ -0.41
H3F3B-213ENST00000593254 RPS15AP62244 130 aaKnown RBP12.52□□□□□ -0.41
H3F3B-213ENST00000593254 SNRPNP63162 240 aaKnown RBP12.52□□□□□ -0.41
H3F3B-213ENST00000593254 CSNK1G2P78368 415 aa12.52□□□□□ -0.41
H3F3B-213ENST00000593254 HECTD2Q5U5R9 776 aa12.52□□□□□ -0.41
H3F3B-213ENST00000593254 FAM45BPQ6NSW5 357 aa12.52□□□□□ -0.41
H3F3B-213ENST00000593254 IGFL2Q6UWQ7 119 aa12.52□□□□□ -0.41
H3F3B-213ENST00000593254 CUZD1Q86UP6 607 aa12.52□□□□□ -0.41
H3F3B-213ENST00000593254 PARP9Q8IXQ6 854 aa12.52□□□□□ -0.41
H3F3B-213ENST00000593254 ZADH2Q8N4Q0 377 aa12.52□□□□□ -0.41
H3F3B-213ENST00000593254 GPATCH11Q8N954 259 aa12.52□□□□□ -0.41
H3F3B-213ENST00000593254 FAM45AQ8TCE6 357 aa12.52□□□□□ -0.41
H3F3B-213ENST00000593254 MMABQ96EY8 250 aaPredicted RBP12.52□□□□□ -0.41
H3F3B-213ENST00000593254 HS3ST6Q96QI5 342 aa12.52□□□□□ -0.41
H3F3B-213ENST00000593254 OLFM1Q99784 485 aa12.52□□□□□ -0.41
H3F3B-213ENST00000593254 SGPP1Q9BX95 441 aa12.52□□□□□ -0.41
H3F3B-213ENST00000593254 TGIF2Q9GZN2 237 aa12.52□□□□□ -0.41
H3F3B-213ENST00000593254 LHPPQ9H008 270 aa12.52□□□□□ -0.41
H3F3B-213ENST00000593254 ATG10Q9H0Y0 220 aa12.52□□□□□ -0.41
H3F3B-213ENST00000593254 MKKSQ9NPJ1 570 aaPredicted RBP12.52□□□□□ -0.41
H3F3B-213ENST00000593254 VWA7Q9Y334 891 aa12.52□□□□□ -0.41
H3F3B-213ENST00000593254 MRPS2Q9Y399 296 aaKnown RBP12.52□□□□□ -0.41
H3F3B-213ENST00000593254 CPAMD8Q8IZJ3 1885 aa12.52□□□□□ -0.41
H3F3B-213ENST00000593254 A0A0A6YYC8 382 aaPredicted RBP12.51□□□□□ -0.41
H3F3B-213ENST00000593254 EFCAB8A8MWE9 144 aa12.51□□□□□ -0.41
H3F3B-213ENST00000593254 IDSB3KWA1 339 aa12.51□□□□□ -0.41
H3F3B-213ENST00000593254 I3L1I5 382 aaPredicted RBP12.51□□□□□ -0.41
H3F3B-213ENST00000593254 E2F3O00716 465 aa12.51□□□□□ -0.41
H3F3B-213ENST00000593254 MAP2K7O14733 419 aa12.51□□□□□ -0.41
H3F3B-213ENST00000593254 FFAR3O14843 346 aa12.51□□□□□ -0.41
H3F3B-213ENST00000593254 GPR42O15529 346 aa12.51□□□□□ -0.41
H3F3B-213ENST00000593254 ZG16O60844 167 aa12.51□□□□□ -0.41
H3F3B-213ENST00000593254 ANXA5P08758 320 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms