RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 SNAP47Q5SQN1 464 aa11.43□□□□□ -0.58
DDX39A-219ENST00000592927 PHF19Q5T6S3 580 aa11.43□□□□□ -0.58
DDX39A-219ENST00000592927 GTF2H2CQ6P1K8 395 aa11.43□□□□□ -0.58
DDX39A-219ENST00000592927 MBOAT1Q6ZNC8 495 aa11.43□□□□□ -0.58
DDX39A-219ENST00000592927 FAM92BQ6ZTR7 304 aa11.43□□□□□ -0.58
DDX39A-219ENST00000592927 ZNF771Q7L3S4 317 aaPredicted RBP11.43□□□□□ -0.58
DDX39A-219ENST00000592927 TMPRSS9Q7Z410 1059 aa11.43□□□□□ -0.58
DDX39A-219ENST00000592927 SYTL1Q8IYJ3 562 aa11.43□□□□□ -0.58
DDX39A-219ENST00000592927 LMNTD1Q8N9Z9 388 aa11.43□□□□□ -0.58
DDX39A-219ENST00000592927 LINC01555Q8NAE3 123 aa11.43□□□□□ -0.58
DDX39A-219ENST00000592927 HMGCLL1Q8TB92 370 aa11.43□□□□□ -0.58
DDX39A-219ENST00000592927 TRPC4APQ8TEL6 797 aa11.43□□□□□ -0.58
DDX39A-219ENST00000592927 AGAP11Q8TF27 550 aa11.43□□□□□ -0.58
DDX39A-219ENST00000592927 ZNF480Q8WV37 535 aa11.43□□□□□ -0.58
DDX39A-219ENST00000592927 SMPDL3AQ92484 453 aa11.43□□□□□ -0.58
DDX39A-219ENST00000592927 SLC22A18Q96BI1 424 aa11.43□□□□□ -0.58
DDX39A-219ENST00000592927 MOCOSQ96EN8 888 aa11.43□□□□□ -0.58
DDX39A-219ENST00000592927 TMEM74Q96NL1 305 aa11.43□□□□□ -0.58
DDX39A-219ENST00000592927 CD180Q99467 661 aa11.43□□□□□ -0.58
DDX39A-219ENST00000592927 TMEM79Q9BSE2 394 aa11.43□□□□□ -0.58
DDX39A-219ENST00000592927 SEMA6CQ9H3T2 930 aa11.43□□□□□ -0.58
DDX39A-219ENST00000592927 ZBTB26Q9HCK0 441 aa11.43□□□□□ -0.58
DDX39A-219ENST00000592927 MID1IP1Q9NPA3 183 aa11.43□□□□□ -0.58
DDX39A-219ENST00000592927 PFDN4Q9NQP4 134 aa11.43□□□□□ -0.58
DDX39A-219ENST00000592927 WDR70Q9NW82 654 aa11.43□□□□□ -0.58
DDX39A-219ENST00000592927 SPHK1Q9NYA1 384 aa11.43□□□□□ -0.58
DDX39A-219ENST00000592927 ACTR10Q9NZ32 417 aa11.43□□□□□ -0.58
DDX39A-219ENST00000592927 TMEM9Q9P0T7 183 aa11.43□□□□□ -0.58
DDX39A-219ENST00000592927 STOX2Q9P2F5 926 aaPredicted RBP11.43□□□□□ -0.58
DDX39A-219ENST00000592927 KLHL3Q9UH77 587 aa11.43□□□□□ -0.58
DDX39A-219ENST00000592927 TRAF6Q9Y4K3 522 aa11.43□□□□□ -0.58
DDX39A-219ENST00000592927 LRRK2Q5S007 2527 aa11.43□□□□□ -0.58
DDX39A-219ENST00000592927 DOPEY1Q5JWR5 2465 aa11.43□□□□□ -0.58
DDX39A-219ENST00000592927 MN1Q10571 1320 aaPredicted RBP11.42□□□□□ -0.58
DDX39A-219ENST00000592927 IGHV5-10-1A0A0J9YXX1 117 aa11.42□□□□□ -0.58
DDX39A-219ENST00000592927 LRRC14BA6NHZ5 514 aa11.42□□□□□ -0.58
DDX39A-219ENST00000592927 A8MU76 341 aa11.42□□□□□ -0.58
DDX39A-219ENST00000592927 UBFD1O14562 309 aaKnown RBP11.42□□□□□ -0.58
DDX39A-219ENST00000592927 AZIN1O14977 448 aa11.42□□□□□ -0.58
DDX39A-219ENST00000592927 CCNT2O60583 730 aaKnown RBP11.42□□□□□ -0.58
DDX39A-219ENST00000592927 CSO75390 466 aaKnown RBP11.42□□□□□ -0.58
DDX39A-219ENST00000592927 RASSF9O75901 435 aa11.42□□□□□ -0.58
DDX39A-219ENST00000592927 C9P02748 559 aa11.42□□□□□ -0.58
DDX39A-219ENST00000592927 UROSP10746 265 aa11.42□□□□□ -0.58
DDX39A-219ENST00000592927 ERGP11308 486 aa11.42□□□□□ -0.58
DDX39A-219ENST00000592927 IMPA1P29218 277 aa11.42□□□□□ -0.58
DDX39A-219ENST00000592927 RBMS1P29558 406 aaKnown RBP11.42□□□□□ -0.58
DDX39A-219ENST00000592927 PRDX3P30048 256 aaKnown RBP11.42□□□□□ -0.58
DDX39A-219ENST00000592927 CCNG1P51959 295 aa11.42□□□□□ -0.58
DDX39A-219ENST00000592927 PPP1CAP62136 330 aa11.42□□□□□ -0.58
DDX39A-219ENST00000592927 ZFP36L1Q07352 338 aaKnown RBP11.42□□□□□ -0.58
DDX39A-219ENST00000592927 CLN3Q13286 438 aa11.42□□□□□ -0.58
DDX39A-219ENST00000592927 TRA2AQ13595 282 aaKnown RBP eCLIP11.42□□□□□ -0.582e-6■□□□□ 10.9
DDX39A-219ENST00000592927 TSTA3Q13630 321 aaPredicted RBP11.42□□□□□ -0.58
DDX39A-219ENST00000592927 FASTKQ14296 549 aaKnown RBP11.42□□□□□ -0.58
DDX39A-219ENST00000592927 RBBP7Q16576 425 aa11.42□□□□□ -0.58
DDX39A-219ENST00000592927 AGTRAPQ6RW13 159 aa11.42□□□□□ -0.58
DDX39A-219ENST00000592927 EPGNQ6UW88 154 aa11.42□□□□□ -0.58
DDX39A-219ENST00000592927 C6orf89Q6UWU4 347 aa11.42□□□□□ -0.58
DDX39A-219ENST00000592927 GPRIN3Q6ZVF9 776 aa11.42□□□□□ -0.58
DDX39A-219ENST00000592927 GOLGA7Q7Z5G4 137 aa11.42□□□□□ -0.58
DDX39A-219ENST00000592927 SLITRK4Q8IW52 837 aa11.42□□□□□ -0.58
DDX39A-219ENST00000592927 TEX9Q8N6V9 391 aa11.42□□□□□ -0.58
DDX39A-219ENST00000592927 GBP7Q8N8V2 638 aaPredicted RBP11.42□□□□□ -0.58
DDX39A-219ENST00000592927 PPFIBP2Q8ND30 876 aa11.42□□□□□ -0.58
DDX39A-219ENST00000592927 THOC1Q96FV9 657 aaKnown RBP11.42□□□□□ -0.58
DDX39A-219ENST00000592927 CCDC74BQ96LY2 380 aa11.42□□□□□ -0.58
DDX39A-219ENST00000592927 NSUN5Q96P11 429 aaKnown RBP11.42□□□□□ -0.58
DDX39A-219ENST00000592927 CCNL2Q96S94 520 aaPredicted RBP11.42□□□□□ -0.58
DDX39A-219ENST00000592927 CCT7Q99832 543 aa11.42□□□□□ -0.58
DDX39A-219ENST00000592927 NTMT1Q9BV86 223 aa11.42□□□□□ -0.58
DDX39A-219ENST00000592927 STRADBQ9C0K7 418 aa11.42□□□□□ -0.58
DDX39A-219ENST00000592927 SEMA4BQ9NPR2 832 aaPredicted RBP11.42□□□□□ -0.58
DDX39A-219ENST00000592927 ACSS2Q9NR19 701 aa11.42□□□□□ -0.58
DDX39A-219ENST00000592927 PDP2Q9P2J9 529 aa11.42□□□□□ -0.58
DDX39A-219ENST00000592927 POMT2Q9UKY4 750 aa11.42□□□□□ -0.58
DDX39A-219ENST00000592927 BSNQ9UPA5 3926 aa11.42□□□□□ -0.58
DDX39A-219ENST00000592927 USP9YO00507 2555 aaPredicted RBP11.42□□□□□ -0.58
DDX39A-219ENST00000592927 PCM1Q15154 2024 aa11.42□□□□□ -0.58
DDX39A-219ENST00000592927 TLCD2A6NGC4 264 aa11.41□□□□□ -0.58
DDX39A-219ENST00000592927 CCT8L1PA6NM43 557 aa11.41□□□□□ -0.58
DDX39A-219ENST00000592927 E7ENX8 843 aa11.41□□□□□ -0.58
DDX39A-219ENST00000592927 HGSO14964 777 aaPredicted RBP11.41□□□□□ -0.58
DDX39A-219ENST00000592927 TOX3O15405 576 aaPredicted RBP11.41□□□□□ -0.58
DDX39A-219ENST00000592927 CCDC22O60826 627 aa11.41□□□□□ -0.58
DDX39A-219ENST00000592927 CRCPO75575 148 aa11.41□□□□□ -0.58
DDX39A-219ENST00000592927 CHEK2O96017 543 aa11.41□□□□□ -0.58
DDX39A-219ENST00000592927 ENO1P06733 434 aaKnown RBP11.41□□□□□ -0.58
DDX39A-219ENST00000592927 EBLN1P0CF75 366 aa11.41□□□□□ -0.58
DDX39A-219ENST00000592927 THRAP10827 490 aa11.41□□□□□ -0.58
DDX39A-219ENST00000592927 UGT2B7P16662 529 aa11.41□□□□□ -0.58
DDX39A-219ENST00000592927 CDH3P22223 829 aa11.41□□□□□ -0.58
DDX39A-219ENST00000592927 CCND1P24385 295 aa11.41□□□□□ -0.58
DDX39A-219ENST00000592927 PEBP1P30086 187 aaKnown RBP11.41□□□□□ -0.58
DDX39A-219ENST00000592927 CCKBRP32239 447 aa11.41□□□□□ -0.58
DDX39A-219ENST00000592927 SH3BP2P78314 561 aa11.41□□□□□ -0.58
DDX39A-219ENST00000592927 FOXK1P85037 733 aa11.41□□□□□ -0.58
DDX39A-219ENST00000592927 TAP2Q03519 686 aa11.41□□□□□ -0.58
DDX39A-219ENST00000592927 NAE1Q13564 534 aa11.41□□□□□ -0.58
DDX39A-219ENST00000592927 SF1Q15637 639 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms