RNA–Protein interactions for RNA: ENST00000592391.5

DDX39A-217, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,080 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-217ENST00000592391 TBC1D19Q8N5T2 526 aa13.81□□□□□ -0.2
DDX39A-217ENST00000592391 TMEM102Q8N9M5 508 aaPredicted RBP13.81□□□□□ -0.2
DDX39A-217ENST00000592391 MFSD9Q8NBP5 474 aa13.81□□□□□ -0.2
DDX39A-217ENST00000592391 SLC44A1Q8WWI5 657 aa13.81□□□□□ -0.2
DDX39A-217ENST00000592391 NACC2Q96BF6 587 aa13.81□□□□□ -0.2
DDX39A-217ENST00000592391 RHOXF2Q9BQY4 288 aa13.81□□□□□ -0.2
DDX39A-217ENST00000592391 L2HGDHQ9H9P8 463 aa13.81□□□□□ -0.2
DDX39A-217ENST00000592391 PELI2Q9HAT8 420 aa13.81□□□□□ -0.2
DDX39A-217ENST00000592391 NMRAL1Q9HBL8 299 aa13.81□□□□□ -0.2
DDX39A-217ENST00000592391 ACSS2Q9NR19 701 aa13.81□□□□□ -0.2
DDX39A-217ENST00000592391 ZNF282Q9UDV7 671 aaPredicted RBP13.81□□□□□ -0.2
DDX39A-217ENST00000592391 ACOT9Q9Y305 439 aa13.81□□□□□ -0.2
DDX39A-217ENST00000592391 MDC1Q14676 2089 aaKnown RBP13.8□□□□□ -0.2
DDX39A-217ENST00000592391 TLN1Q9Y490 2541 aaKnown RBP13.8□□□□□ -0.2
DDX39A-217ENST00000592391 IGLV3-12A0A075B6K2 115 aa13.8□□□□□ -0.2
DDX39A-217ENST00000592391 A0A087X1B8 175 aa13.8□□□□□ -0.2
DDX39A-217ENST00000592391 A0A0A6YYC8 382 aaPredicted RBP13.8□□□□□ -0.2
DDX39A-217ENST00000592391 TRBC2A0A5B9 178 aa13.8□□□□□ -0.2
DDX39A-217ENST00000592391 I3L1I5 382 aaPredicted RBP13.8□□□□□ -0.2
DDX39A-217ENST00000592391 PEX12O00623 359 aa13.8□□□□□ -0.2
DDX39A-217ENST00000592391 TAPBPO15533 448 aa13.8□□□□□ -0.2
DDX39A-217ENST00000592391 FOXS1O43638 330 aa13.8□□□□□ -0.2
DDX39A-217ENST00000592391 OR1F1O43749 312 aa13.8□□□□□ -0.2
DDX39A-217ENST00000592391 IPO13O94829 963 aaKnown RBP13.8□□□□□ -0.2
DDX39A-217ENST00000592391 WDR47O94967 919 aa13.8□□□□□ -0.2
DDX39A-217ENST00000592391 C2P06681 752 aa13.8□□□□□ -0.2
DDX39A-217ENST00000592391 INHBAP08476 426 aa13.8□□□□□ -0.2
DDX39A-217ENST00000592391 LTA4HP09960 611 aaKnown RBP13.8□□□□□ -0.2
DDX39A-217ENST00000592391 SLC35G6P0C7Q6 338 aa13.8□□□□□ -0.2
DDX39A-217ENST00000592391 TFEBP19484 476 aa13.8□□□□□ -0.2
DDX39A-217ENST00000592391 GGT5P36269 586 aa13.8□□□□□ -0.2
DDX39A-217ENST00000592391 GDF5P43026 501 aa13.8□□□□□ -0.2
DDX39A-217ENST00000592391 RRADP55042 308 aa13.8□□□□□ -0.2
DDX39A-217ENST00000592391 MEF2AQ02078 507 aaPredicted RBP13.8□□□□□ -0.2
DDX39A-217ENST00000592391 OCA2Q04671 838 aa13.8□□□□□ -0.2
DDX39A-217ENST00000592391 SULT1C3Q6IMI6 304 aa13.8□□□□□ -0.2
DDX39A-217ENST00000592391 TMEM214Q6NUQ4 689 aaKnown RBP13.8□□□□□ -0.2
DDX39A-217ENST00000592391 NXPE4Q6UWF7 544 aa13.8□□□□□ -0.2
DDX39A-217ENST00000592391 PPP1R32Q7Z5V6 425 aa13.8□□□□□ -0.2
DDX39A-217ENST00000592391 TMPRSS11BQ86T26 416 aa13.8□□□□□ -0.2
DDX39A-217ENST00000592391 ISCA2Q86U28 154 aa13.8□□□□□ -0.2
DDX39A-217ENST00000592391 PDPRQ8NCN5 879 aa13.8□□□□□ -0.2
DDX39A-217ENST00000592391 LRRN4CLQ8ND94 238 aa13.8□□□□□ -0.2
DDX39A-217ENST00000592391 STAG3L4Q8TBR4 150 aa13.8□□□□□ -0.2
DDX39A-217ENST00000592391 STT3BQ8TCJ2 826 aa13.8□□□□□ -0.2
DDX39A-217ENST00000592391 SLC13A3Q8WWT9 602 aa13.8□□□□□ -0.2
DDX39A-217ENST00000592391 MMABQ96EY8 250 aaPredicted RBP13.8□□□□□ -0.2
DDX39A-217ENST00000592391 MACROD1Q9BQ69 325 aa13.8□□□□□ -0.2
DDX39A-217ENST00000592391 TMEM79Q9BSE2 394 aa13.8□□□□□ -0.2
DDX39A-217ENST00000592391 SOX17Q9H6I2 414 aaPredicted RBP13.8□□□□□ -0.2
DDX39A-217ENST00000592391 ALG9Q9H6U8 611 aa13.8□□□□□ -0.2
DDX39A-217ENST00000592391 CNOT10Q9H9A5 744 aaKnown RBP13.8□□□□□ -0.2
DDX39A-217ENST00000592391 SNX15Q9NRS6 342 aa13.8□□□□□ -0.2
DDX39A-217ENST00000592391 IGSF5Q9NSI5 407 aa13.8□□□□□ -0.2
DDX39A-217ENST00000592391 WWOXQ9NZC7 414 aa13.8□□□□□ -0.2
DDX39A-217ENST00000592391 CD274Q9NZQ7 290 aa13.8□□□□□ -0.2
DDX39A-217ENST00000592391 RNF112Q9ULX5 631 aa13.8□□□□□ -0.2
DDX39A-217ENST00000592391 MRPS2Q9Y399 296 aaKnown RBP13.8□□□□□ -0.2
DDX39A-217ENST00000592391 A0A087WUV0 522 aaPredicted RBP13.79□□□□□ -0.2
DDX39A-217ENST00000592391 H0YIG0 161 aa13.79□□□□□ -0.2
DDX39A-217ENST00000592391 IGHEP01854 428 aa13.79□□□□□ -0.2
DDX39A-217ENST00000592391 ALDOAP04075 364 aaKnown RBP13.79□□□□□ -0.2
DDX39A-217ENST00000592391 ZGLP1P0C6A0 271 aa13.79□□□□□ -0.2
DDX39A-217ENST00000592391 GNAZP19086 355 aa13.79□□□□□ -0.2
DDX39A-217ENST00000592391 MMP11P24347 488 aa13.79□□□□□ -0.2
DDX39A-217ENST00000592391 AVPR1BP47901 424 aa13.79□□□□□ -0.2
DDX39A-217ENST00000592391 KCNC1P48547 511 aa13.79□□□□□ -0.2
DDX39A-217ENST00000592391 SERPINB8P50452 374 aa13.79□□□□□ -0.2
DDX39A-217ENST00000592391 CCL11P51671 97 aa13.79□□□□□ -0.2
DDX39A-217ENST00000592391 SNRPNP63162 240 aaKnown RBP13.79□□□□□ -0.2
DDX39A-217ENST00000592391 REEP5Q00765 189 aa13.79□□□□□ -0.2
DDX39A-217ENST00000592391 CDC16Q13042 620 aa13.79□□□□□ -0.2
DDX39A-217ENST00000592391 PWP1Q13610 501 aa13.79□□□□□ -0.2
DDX39A-217ENST00000592391 LACTB2Q53H82 288 aaPredicted RBP13.79□□□□□ -0.2
DDX39A-217ENST00000592391 TCTN3Q6NUS6 607 aa13.79□□□□□ -0.2
DDX39A-217ENST00000592391 SHISA6Q6ZSJ9 500 aa13.79□□□□□ -0.2
DDX39A-217ENST00000592391 TRMT10CQ7L0Y3 403 aaKnown RBP13.79□□□□□ -0.2
DDX39A-217ENST00000592391 CENPLQ8N0S6 344 aaPredicted RBP13.79□□□□□ -0.2
DDX39A-217ENST00000592391 AMER3Q8N944 861 aa13.79□□□□□ -0.2
DDX39A-217ENST00000592391 ZNF740Q8NDX6 193 aa13.79□□□□□ -0.2
DDX39A-217ENST00000592391 KCTD4Q8WVF5 259 aa13.79□□□□□ -0.2
DDX39A-217ENST00000592391 MIEF2Q96C03 454 aa13.79□□□□□ -0.2
DDX39A-217ENST00000592391 NXNL1Q96CM4 212 aa13.79□□□□□ -0.2
DDX39A-217ENST00000592391 FER1L6-AS2Q96M78 137 aa13.79□□□□□ -0.2
DDX39A-217ENST00000592391 PAFAH2Q99487 392 aa13.79□□□□□ -0.2
DDX39A-217ENST00000592391 AIF1LQ9BQI0 150 aa13.79□□□□□ -0.2
DDX39A-217ENST00000592391 CRB3Q9BUF7 120 aa13.79□□□□□ -0.2
DDX39A-217ENST00000592391 CAPS2Q9BXY5 557 aa13.79□□□□□ -0.2
DDX39A-217ENST00000592391 SPNS1Q9H2V7 528 aa13.79□□□□□ -0.2
DDX39A-217ENST00000592391 ZNF71Q9NQZ8 489 aaPredicted RBP13.79□□□□□ -0.2
DDX39A-217ENST00000592391 SEMA3GQ9NS98 782 aa13.79□□□□□ -0.2
DDX39A-217ENST00000592391 P4HTMQ9NXG6 502 aa13.79□□□□□ -0.2
DDX39A-217ENST00000592391 GPRC5BQ9NZH0 403 aa13.79□□□□□ -0.2
DDX39A-217ENST00000592391 TRPC4Q9UBN4 977 aa13.79□□□□□ -0.2
DDX39A-217ENST00000592391 ZFP69BQ9UJL9 534 aa13.79□□□□□ -0.2
DDX39A-217ENST00000592391 PTBP2Q9UKA9 531 aaKnown RBP13.79□□□□□ -0.2
DDX39A-217ENST00000592391 TP53TG5Q9Y2B4 290 aa13.79□□□□□ -0.2
DDX39A-217ENST00000592391 MAP4K5Q9Y4K4 846 aa13.79□□□□□ -0.2
DDX39A-217ENST00000592391 PCDHGA9Q9Y5G4 932 aaKnown RBP13.79□□□□□ -0.2
DDX39A-217ENST00000592391 IKBKGQ9Y6K9 419 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms