RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 VWA2Q5GFL6 755 aa17.32■□□□□ 0.36
DDX39A-212ENST00000590260 COLEC12Q5KU26 742 aa17.32■□□□□ 0.36
DDX39A-212ENST00000590260 GARNL3Q5VVW2 1013 aa17.32■□□□□ 0.36
DDX39A-212ENST00000590260 TMEM214Q6NUQ4 689 aaKnown RBP17.32■□□□□ 0.36
DDX39A-212ENST00000590260 PRMT9Q6P2P2 845 aa17.32■□□□□ 0.36
DDX39A-212ENST00000590260 ISCA2Q86U28 154 aa17.32■□□□□ 0.36
DDX39A-212ENST00000590260 LAPTM4BQ86VI4 370 aa17.32■□□□□ 0.36
DDX39A-212ENST00000590260 PTRH1Q86Y79 214 aaKnown RBP17.32■□□□□ 0.36
DDX39A-212ENST00000590260 PDSS2Q86YH6 399 aa17.32■□□□□ 0.36
DDX39A-212ENST00000590260 AMER2Q8N7J2 671 aa17.32■□□□□ 0.36
DDX39A-212ENST00000590260 ANKRD53Q8N9V6 530 aa17.32■□□□□ 0.36
DDX39A-212ENST00000590260 MFSD9Q8NBP5 474 aa17.32■□□□□ 0.36
DDX39A-212ENST00000590260 STT3BQ8TCJ2 826 aa17.32■□□□□ 0.36
DDX39A-212ENST00000590260 SLC5A11Q8WWX8 675 aa17.32■□□□□ 0.36
DDX39A-212ENST00000590260 ATOH8Q96SQ7 321 aa17.32■□□□□ 0.36
DDX39A-212ENST00000590260 AICDAQ9GZX7 198 aa17.32■□□□□ 0.36
DDX39A-212ENST00000590260 MTRF1LQ9UGC7 380 aaKnown RBP17.32■□□□□ 0.36
DDX39A-212ENST00000590260 NFU1Q9UMS0 254 aa17.32■□□□□ 0.36
DDX39A-212ENST00000590260 ALDOAP04075 364 aaKnown RBP17.31■□□□□ 0.36
DDX39A-212ENST00000590260 FAM153BP0C7A2 387 aa17.31■□□□□ 0.36
DDX39A-212ENST00000590260 SFTPCP11686 197 aa17.31■□□□□ 0.36
DDX39A-212ENST00000590260 PLA2G2AP14555 144 aa17.31■□□□□ 0.36
DDX39A-212ENST00000590260 EPORP19235 508 aa17.31■□□□□ 0.36
DDX39A-212ENST00000590260 GGT5P36269 586 aa17.31■□□□□ 0.36
DDX39A-212ENST00000590260 CCL11P51671 97 aa17.31■□□□□ 0.36
DDX39A-212ENST00000590260 CCR8P51685 355 aa17.31■□□□□ 0.36
DDX39A-212ENST00000590260 ATP6V0D1P61421 351 aa17.31■□□□□ 0.36
DDX39A-212ENST00000590260 MAT1AQ00266 395 aaKnown RBP17.31■□□□□ 0.36
DDX39A-212ENST00000590260 REEP5Q00765 189 aa17.31■□□□□ 0.36
DDX39A-212ENST00000590260 KLC1Q07866 573 aa17.31■□□□□ 0.36
DDX39A-212ENST00000590260 DSG2Q14126 1118 aa17.31■□□□□ 0.36
DDX39A-212ENST00000590260 FAM153CQ494X1 144 aa17.31■□□□□ 0.36
DDX39A-212ENST00000590260 MROH9Q5TGP6 573 aa17.31■□□□□ 0.36
DDX39A-212ENST00000590260 RAB43Q86YS6 212 aa17.31■□□□□ 0.36
DDX39A-212ENST00000590260 OR9A4Q8NGU2 314 aa17.31■□□□□ 0.36
DDX39A-212ENST00000590260 RERGQ96A58 199 aaPredicted RBP17.31■□□□□ 0.36
DDX39A-212ENST00000590260 KIAA1191Q96A73 305 aa17.31■□□□□ 0.36
DDX39A-212ENST00000590260 COL26A1Q96A83 441 aa17.31■□□□□ 0.36
DDX39A-212ENST00000590260 NXNL1Q96CM4 212 aa17.31■□□□□ 0.36
DDX39A-212ENST00000590260 THAP11Q96EK4 314 aa17.31■□□□□ 0.36
DDX39A-212ENST00000590260 MVB12AQ96EY5 273 aa17.31■□□□□ 0.36
DDX39A-212ENST00000590260 CYTH2Q99418 400 aa17.31■□□□□ 0.36
DDX39A-212ENST00000590260 EGFL8Q99944 293 aa17.31■□□□□ 0.36
DDX39A-212ENST00000590260 L2HGDHQ9H9P8 463 aa17.31■□□□□ 0.36
DDX39A-212ENST00000590260 P4HTMQ9NXG6 502 aa17.31■□□□□ 0.36
DDX39A-212ENST00000590260 HS3ST3B1Q9Y662 390 aa17.31■□□□□ 0.36
DDX39A-212ENST00000590260 TLN1Q9Y490 2541 aaKnown RBP17.31■□□□□ 0.36
DDX39A-212ENST00000590260 TRBC2A0A5B9 178 aa17.3■□□□□ 0.36
DDX39A-212ENST00000590260 C4orf51C9J302 202 aa17.3■□□□□ 0.36
DDX39A-212ENST00000590260 SUV39H1O43463 412 aa17.3■□□□□ 0.36
DDX39A-212ENST00000590260 DNAJB6O75190 326 aa17.3■□□□□ 0.36
DDX39A-212ENST00000590260 ALOX12BO75342 701 aa17.3■□□□□ 0.36
DDX39A-212ENST00000590260 C2P06681 752 aa17.3■□□□□ 0.36
DDX39A-212ENST00000590260 ZGLP1P0C6A0 271 aa17.3■□□□□ 0.36
DDX39A-212ENST00000590260 RHOXF2BP0C7M4 288 aa17.3■□□□□ 0.36
DDX39A-212ENST00000590260 FBLP22087 321 aaKnown RBP17.3■□□□□ 0.36
DDX39A-212ENST00000590260 VARSP26640 1264 aaKnown RBP17.3■□□□□ 0.36
DDX39A-212ENST00000590260 SCTRP47872 440 aa17.3■□□□□ 0.36
DDX39A-212ENST00000590260 HNMTP50135 292 aa17.3■□□□□ 0.36
DDX39A-212ENST00000590260 HYAL2Q12891 473 aa17.3■□□□□ 0.36
DDX39A-212ENST00000590260 FAM53BQ14153 422 aa17.3■□□□□ 0.36
DDX39A-212ENST00000590260 TCTN3Q6NUS6 607 aa17.3■□□□□ 0.36
DDX39A-212ENST00000590260 NXPE4Q6UWF7 544 aa17.3■□□□□ 0.36
DDX39A-212ENST00000590260 FRA10AC1Q70Z53 315 aa17.3■□□□□ 0.36
DDX39A-212ENST00000590260 ASPGQ86U10 573 aa17.3■□□□□ 0.36
DDX39A-212ENST00000590260 GPSM1Q86YR5 675 aa17.3■□□□□ 0.36
DDX39A-212ENST00000590260 PDPRQ8NCN5 879 aa17.3■□□□□ 0.36
DDX39A-212ENST00000590260 FDCSPQ8NFU4 85 aa17.3■□□□□ 0.36
DDX39A-212ENST00000590260 UHMK1Q8TAS1 419 aaKnown RBP17.3■□□□□ 0.36
DDX39A-212ENST00000590260 KCTD4Q8WVF5 259 aa17.3■□□□□ 0.36
DDX39A-212ENST00000590260 SLC44A1Q8WWI5 657 aa17.3■□□□□ 0.36
DDX39A-212ENST00000590260 MMABQ96EY8 250 aaPredicted RBP17.3■□□□□ 0.36
DDX39A-212ENST00000590260 GPR78Q96P69 363 aa17.3■□□□□ 0.36
DDX39A-212ENST00000590260 RHOXF2Q9BQY4 288 aa17.3■□□□□ 0.36
DDX39A-212ENST00000590260 NUDT9Q9BW91 350 aa17.3■□□□□ 0.36
DDX39A-212ENST00000590260 TXLNGYQ9BZA5 131 aa17.3■□□□□ 0.36
DDX39A-212ENST00000590260 DRC3Q9H069 523 aa17.3■□□□□ 0.36
DDX39A-212ENST00000590260 ALG9Q9H6U8 611 aa17.3■□□□□ 0.36
DDX39A-212ENST00000590260 SNX15Q9NRS6 342 aa17.3■□□□□ 0.36
DDX39A-212ENST00000590260 PTBP2Q9UKA9 531 aaKnown RBP17.3■□□□□ 0.36
DDX39A-212ENST00000590260 ZNF462Q96JM2 2506 aa17.3■□□□□ 0.36
DDX39A-212ENST00000590260 OR1F1O43749 312 aa17.29■□□□□ 0.36
DDX39A-212ENST00000590260 WDR47O94967 919 aa17.29■□□□□ 0.36
DDX39A-212ENST00000590260 B3GALT4O96024 378 aa17.29■□□□□ 0.36
DDX39A-212ENST00000590260 CD63P08962 238 aa17.29■□□□□ 0.36
DDX39A-212ENST00000590260 MYBL2P10244 700 aa17.29■□□□□ 0.36
DDX39A-212ENST00000590260 PIM1P11309 404 aaPredicted RBP17.29■□□□□ 0.36
DDX39A-212ENST00000590260 MTHFD2P13995 350 aa17.29■□□□□ 0.36
DDX39A-212ENST00000590260 IL1RNP18510 177 aa17.29■□□□□ 0.36
DDX39A-212ENST00000590260 TFEBP19484 476 aa17.29■□□□□ 0.36
DDX39A-212ENST00000590260 MMP11P24347 488 aa17.29■□□□□ 0.36
DDX39A-212ENST00000590260 GCAP28676 217 aa17.29■□□□□ 0.36
DDX39A-212ENST00000590260 MAGEA12P43365 314 aa17.29■□□□□ 0.36
DDX39A-212ENST00000590260 HSPA7P48741 367 aa17.29■□□□□ 0.36
DDX39A-212ENST00000590260 LACTB2Q53H82 288 aaPredicted RBP17.29■□□□□ 0.36
DDX39A-212ENST00000590260 DCAF10Q5QP82 559 aa17.29■□□□□ 0.36
DDX39A-212ENST00000590260 KIRREL2Q6UWL6 708 aa17.29■□□□□ 0.36
DDX39A-212ENST00000590260 SLCO4C1Q6ZQN7 724 aa17.29■□□□□ 0.36
DDX39A-212ENST00000590260 MED25Q71SY5 747 aa17.29■□□□□ 0.36
DDX39A-212ENST00000590260 TMPRSS11BQ86T26 416 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms