RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 ASPDHA6ND91 283 aa11.59□□□□□ -0.55
CCBE1-203ENST00000589116 C9JVG2 144 aa11.59□□□□□ -0.55
CCBE1-203ENST00000589116 MAP3K13O43283 966 aa11.59□□□□□ -0.55
CCBE1-203ENST00000589116 SEMA3DO95025 777 aa11.59□□□□□ -0.55
CCBE1-203ENST00000589116 ETHE1O95571 254 aa11.59□□□□□ -0.55
CCBE1-203ENST00000589116 CSF2P04141 144 aa11.59□□□□□ -0.55
CCBE1-203ENST00000589116 NME1P15531 152 aaKnown RBP11.59□□□□□ -0.55
CCBE1-203ENST00000589116 CMPK1P30085 196 aa11.59□□□□□ -0.55
CCBE1-203ENST00000589116 ASMTP46597 345 aa11.59□□□□□ -0.55
CCBE1-203ENST00000589116 ACTR3P61158 418 aa11.59□□□□□ -0.55
CCBE1-203ENST00000589116 MEF2AQ02078 507 aaPredicted RBP11.59□□□□□ -0.55
CCBE1-203ENST00000589116 COL9A2Q14055 689 aaPredicted RBP11.59□□□□□ -0.55
CCBE1-203ENST00000589116 KPNB1Q14974 876 aaKnown RBP11.59□□□□□ -0.55
CCBE1-203ENST00000589116 SNCBQ16143 134 aa11.59□□□□□ -0.55
CCBE1-203ENST00000589116 ZNF423Q2M1K9 1284 aa11.59□□□□□ -0.55
CCBE1-203ENST00000589116 SPATS1Q496A3 300 aa11.59□□□□□ -0.55
CCBE1-203ENST00000589116 C1orf146Q5VVC0 180 aa11.59□□□□□ -0.55
CCBE1-203ENST00000589116 CWF19L1Q69YN2 538 aaKnown RBP11.59□□□□□ -0.55
CCBE1-203ENST00000589116 ADNP2Q6IQ32 1131 aa11.59□□□□□ -0.55
CCBE1-203ENST00000589116 ARPINQ7Z6K5 226 aa11.59□□□□□ -0.55
CCBE1-203ENST00000589116 TAF8Q7Z7C8 310 aa11.59□□□□□ -0.55
CCBE1-203ENST00000589116 RBM12BQ8IXT5 1001 aaKnown RBP11.59□□□□□ -0.55
CCBE1-203ENST00000589116 AVL9Q8NBF6 648 aa11.59□□□□□ -0.55
CCBE1-203ENST00000589116 VPS33AQ96AX1 596 aa11.59□□□□□ -0.55
CCBE1-203ENST00000589116 NRTNQ99748 197 aa11.59□□□□□ -0.55
CCBE1-203ENST00000589116 GPATCH1Q9BRR8 931 aaKnown RBP11.59□□□□□ -0.55
CCBE1-203ENST00000589116 DUSP15Q9H1R2 295 aaPredicted RBP11.59□□□□□ -0.55
CCBE1-203ENST00000589116 TCEAL2Q9H3H9 227 aaPredicted RBP11.59□□□□□ -0.55
CCBE1-203ENST00000589116 TM9SF3Q9HD45 589 aa11.59□□□□□ -0.55
CCBE1-203ENST00000589116 PRM3Q9NNZ6 103 aa11.59□□□□□ -0.55
CCBE1-203ENST00000589116 MRPS30Q9NP92 439 aaKnown RBP11.59□□□□□ -0.55
CCBE1-203ENST00000589116 TMEM184CQ9NVA4 438 aa11.59□□□□□ -0.55
CCBE1-203ENST00000589116 DLL3Q9NYJ7 618 aa11.59□□□□□ -0.55
CCBE1-203ENST00000589116 KLF15Q9UIH9 416 aa11.59□□□□□ -0.55
CCBE1-203ENST00000589116 INVSQ9Y283 1065 aa11.59□□□□□ -0.55
CCBE1-203ENST00000589116 DMXL1Q9Y485 3027 aa11.59□□□□□ -0.55
CCBE1-203ENST00000589116 ARHGEF17Q96PE2 2063 aaPredicted RBP11.58□□□□□ -0.56
CCBE1-203ENST00000589116 PRAMEF33A0A0G2JMD5 474 aa11.58□□□□□ -0.56
CCBE1-203ENST00000589116 TRBC2A0A5B9 178 aa11.58□□□□□ -0.56
CCBE1-203ENST00000589116 ANKDD1BA6NHY2 528 aa11.58□□□□□ -0.56
CCBE1-203ENST00000589116 FXYD1O00168 92 aa11.58□□□□□ -0.56
CCBE1-203ENST00000589116 TLR4O00206 839 aa11.58□□□□□ -0.56
CCBE1-203ENST00000589116 TRIM38O00635 465 aa11.58□□□□□ -0.56
CCBE1-203ENST00000589116 PDE5AO76074 875 aa11.58□□□□□ -0.56
CCBE1-203ENST00000589116 VIPP01282 170 aa11.58□□□□□ -0.56
CCBE1-203ENST00000589116 WNT1P04628 370 aa11.58□□□□□ -0.56
CCBE1-203ENST00000589116 CHRM5P08912 532 aaPredicted RBP11.58□□□□□ -0.56
CCBE1-203ENST00000589116 JUNDP17535 347 aa11.58□□□□□ -0.56
CCBE1-203ENST00000589116 PRPS1L1P21108 318 aa11.58□□□□□ -0.56
CCBE1-203ENST00000589116 ME2P23368 584 aa11.58□□□□□ -0.56
CCBE1-203ENST00000589116 PTX3P26022 381 aaPredicted RBP11.58□□□□□ -0.56
CCBE1-203ENST00000589116 TIA1P31483 386 aaKnown RBP eCLIP11.58□□□□□ -0.56
CCBE1-203ENST00000589116 GRK3P35626 688 aa11.58□□□□□ -0.56
CCBE1-203ENST00000589116 DPP6P42658 865 aa11.58□□□□□ -0.56
CCBE1-203ENST00000589116 UBE2IP63279 158 aaKnown RBP11.58□□□□□ -0.56
CCBE1-203ENST00000589116 CSNK1G2P78368 415 aa11.58□□□□□ -0.56
CCBE1-203ENST00000589116 NFYCQ13952 458 aa11.58□□□□□ -0.56
CCBE1-203ENST00000589116 KIR2DS3Q14952 304 aa11.58□□□□□ -0.56
CCBE1-203ENST00000589116 RBBP5Q15291 538 aaKnown RBP11.58□□□□□ -0.56
CCBE1-203ENST00000589116 ANGPT1Q15389 498 aa11.58□□□□□ -0.56
CCBE1-203ENST00000589116 TCEA2Q15560 299 aa11.58□□□□□ -0.56
CCBE1-203ENST00000589116 SAMD4BQ5PRF9 694 aaKnown RBP11.58□□□□□ -0.56
CCBE1-203ENST00000589116 RIPOR1Q6ZS17 1223 aa11.58□□□□□ -0.56
CCBE1-203ENST00000589116 MSANTD1Q6ZTZ1 278 aa11.58□□□□□ -0.56
CCBE1-203ENST00000589116 HPS6Q86YV9 775 aa11.58□□□□□ -0.56
CCBE1-203ENST00000589116 SYT12Q8IV01 421 aa11.58□□□□□ -0.56
CCBE1-203ENST00000589116 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.58□□□□□ -0.56
CCBE1-203ENST00000589116 TBC1D19Q8N5T2 526 aa11.58□□□□□ -0.56
CCBE1-203ENST00000589116 C1orf52Q8N6N3 182 aaKnown RBP11.58□□□□□ -0.56
CCBE1-203ENST00000589116 ZNF740Q8NDX6 193 aa11.58□□□□□ -0.56
CCBE1-203ENST00000589116 OR2L3Q8NG85 312 aa11.58□□□□□ -0.56
CCBE1-203ENST00000589116 DNAJB8Q8NHS0 232 aa11.58□□□□□ -0.56
CCBE1-203ENST00000589116 C1orf216Q8TAB5 229 aa11.58□□□□□ -0.56
CCBE1-203ENST00000589116 WDR60Q8WVS4 1066 aa11.58□□□□□ -0.56
CCBE1-203ENST00000589116 SLC13A3Q8WWT9 602 aa11.58□□□□□ -0.56
CCBE1-203ENST00000589116 DNASE2BQ8WZ79 361 aa11.58□□□□□ -0.56
CCBE1-203ENST00000589116 JADE3Q92613 823 aa11.58□□□□□ -0.56
CCBE1-203ENST00000589116 LRRC58Q96CX6 371 aa11.58□□□□□ -0.56
CCBE1-203ENST00000589116 SLC45A3Q96JT2 553 aa11.58□□□□□ -0.56
CCBE1-203ENST00000589116 LRRC61Q9BV99 259 aa11.58□□□□□ -0.56
CCBE1-203ENST00000589116 SARGQ9BW04 601 aa11.58□□□□□ -0.56
CCBE1-203ENST00000589116 SRMSQ9H3Y6 488 aa11.58□□□□□ -0.56
CCBE1-203ENST00000589116 TMEM181Q9P2C4 612 aa11.58□□□□□ -0.56
CCBE1-203ENST00000589116 ABCD2Q9UBJ2 740 aa11.58□□□□□ -0.56
CCBE1-203ENST00000589116 BCAP29Q9UHQ4 241 aa11.58□□□□□ -0.56
CCBE1-203ENST00000589116 POMPQ9Y244 141 aa11.58□□□□□ -0.56
CCBE1-203ENST00000589116 HEATR5BQ9P2D3 2071 aa11.58□□□□□ -0.56
CCBE1-203ENST00000589116 ZFHX4Q86UP3 3567 aa11.57□□□□□ -0.56
CCBE1-203ENST00000589116 H7BY64 318 aa11.57□□□□□ -0.56
CCBE1-203ENST00000589116 FKBP9O95302 570 aa11.57□□□□□ -0.56
CCBE1-203ENST00000589116 PGRP06401 933 aa11.57□□□□□ -0.56
CCBE1-203ENST00000589116 BCKDHBP21953 392 aa11.57□□□□□ -0.56
CCBE1-203ENST00000589116 PEBP1P30086 187 aaKnown RBP11.57□□□□□ -0.56
CCBE1-203ENST00000589116 PLCL1Q15111 1095 aa11.57□□□□□ -0.56
CCBE1-203ENST00000589116 ELOCQ15369 112 aa11.57□□□□□ -0.56
CCBE1-203ENST00000589116 FAM174BQ3ZCQ3 159 aa11.57□□□□□ -0.56
CCBE1-203ENST00000589116 PRRT3Q5FWE3 981 aa11.57□□□□□ -0.56
CCBE1-203ENST00000589116 WDR45BQ5MNZ6 344 aa11.57□□□□□ -0.56
CCBE1-203ENST00000589116 LAYNQ6UX15 382 aa11.57□□□□□ -0.56
CCBE1-203ENST00000589116 VN1R5Q7Z5H4 357 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms