RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 JUNDP17535 347 aa19.65■□□□□ 0.74
ATG4D-204ENST00000586417 MAPK1P28482 360 aa19.65■□□□□ 0.74
ATG4D-204ENST00000586417 ERFP50548 548 aa19.65■□□□□ 0.74
ATG4D-204ENST00000586417 RAB28P51157 221 aa19.65■□□□□ 0.74
ATG4D-204ENST00000586417 SLC7A2P52569 658 aa19.65■□□□□ 0.74
ATG4D-204ENST00000586417 CLDN8P56748 225 aa19.65■□□□□ 0.74
ATG4D-204ENST00000586417 MEF2AQ02078 507 aaPredicted RBP19.65■□□□□ 0.74
ATG4D-204ENST00000586417 FOXM1Q08050 763 aa19.65■□□□□ 0.74
ATG4D-204ENST00000586417 C1orf61Q13536 156 aa19.65■□□□□ 0.74
ATG4D-204ENST00000586417 LAPTM5Q13571 262 aa19.65■□□□□ 0.74
ATG4D-204ENST00000586417 CAPRIN1Q14444 709 aaKnown RBP19.65■□□□□ 0.74
ATG4D-204ENST00000586417 SLC2A7Q6PXP3 512 aa19.65■□□□□ 0.74
ATG4D-204ENST00000586417 NRROSQ86YC3 692 aa19.65■□□□□ 0.74
ATG4D-204ENST00000586417 DPP10Q8N608 796 aa19.65■□□□□ 0.74
ATG4D-204ENST00000586417 ZNF740Q8NDX6 193 aa19.65■□□□□ 0.74
ATG4D-204ENST00000586417 OR52E1Q8NGJ3 308 aa19.65■□□□□ 0.74
ATG4D-204ENST00000586417 CLHC1Q8NHS4 586 aa19.65■□□□□ 0.74
ATG4D-204ENST00000586417 STMN2Q93045 179 aa19.65■□□□□ 0.74
ATG4D-204ENST00000586417 PCBD2Q9H0N5 130 aa19.65■□□□□ 0.74
ATG4D-204ENST00000586417 SMOC1Q9H4F8 434 aa19.65■□□□□ 0.74
ATG4D-204ENST00000586417 A6NCN8 305 aa19.64■□□□□ 0.73
ATG4D-204ENST00000586417 PRORSD1PA6NEY8 169 aa19.64■□□□□ 0.73
ATG4D-204ENST00000586417 FOXE1O00358 373 aaPredicted RBP19.64■□□□□ 0.73
ATG4D-204ENST00000586417 DLL1O00548 723 aa19.64■□□□□ 0.73
ATG4D-204ENST00000586417 CFIP05156 583 aa19.64■□□□□ 0.73
ATG4D-204ENST00000586417 NME1P15531 152 aaKnown RBP19.64■□□□□ 0.73
ATG4D-204ENST00000586417 SLC6A2P23975 617 aa19.64■□□□□ 0.73
ATG4D-204ENST00000586417 PSMB5P28074 263 aa19.64■□□□□ 0.73
ATG4D-204ENST00000586417 MSX2P35548 267 aaPredicted RBP19.64■□□□□ 0.73
ATG4D-204ENST00000586417 CTSKP43235 329 aa19.64■□□□□ 0.73
ATG4D-204ENST00000586417 RPS13P62277 151 aaKnown RBP19.64■□□□□ 0.73
ATG4D-204ENST00000586417 MS4A2Q01362 244 aa19.64■□□□□ 0.73
ATG4D-204ENST00000586417 NFYCQ13952 458 aa19.64■□□□□ 0.73
ATG4D-204ENST00000586417 RCN1Q15293 331 aa19.64■□□□□ 0.73
ATG4D-204ENST00000586417 ZC3H14Q6PJT7 736 aaKnown RBP19.64■□□□□ 0.73
ATG4D-204ENST00000586417 C17orf64Q86WR6 236 aa19.64■□□□□ 0.73
ATG4D-204ENST00000586417 RAB42Q8N4Z0 105 aa19.64■□□□□ 0.73
ATG4D-204ENST00000586417 ZBTB18Q99592 522 aa19.64■□□□□ 0.73
ATG4D-204ENST00000586417 ARRDC1-AS1Q9H2J1 176 aa19.64■□□□□ 0.73
ATG4D-204ENST00000586417 XKR8Q9H6D3 395 aa19.64■□□□□ 0.73
ATG4D-204ENST00000586417 PELI2Q9HAT8 420 aa19.64■□□□□ 0.73
ATG4D-204ENST00000586417 DMRT3Q9NQL9 472 aa19.64■□□□□ 0.73
ATG4D-204ENST00000586417 CUEDC1Q9NWM3 386 aaPredicted RBP19.64■□□□□ 0.73
ATG4D-204ENST00000586417 TRNAU1APQ9NX07 287 aaKnown RBP19.64■□□□□ 0.73
ATG4D-204ENST00000586417 SLAMF8Q9P0V8 285 aa19.64■□□□□ 0.73
ATG4D-204ENST00000586417 APOBEC3BQ9UH17 382 aaKnown RBP19.64■□□□□ 0.73
ATG4D-204ENST00000586417 ICKQ9UPZ9 632 aa19.64■□□□□ 0.73
ATG4D-204ENST00000586417 TSC22D4Q9Y3Q8 395 aa19.64■□□□□ 0.73
ATG4D-204ENST00000586417 NME4O00746 187 aa19.63■□□□□ 0.73
ATG4D-204ENST00000586417 HIST2H2ACQ16777 129 aaPredicted RBP19.63■□□□□ 0.73
ATG4D-204ENST00000586417 PRRT3Q5FWE3 981 aa19.63■□□□□ 0.73
ATG4D-204ENST00000586417 HIST2H2AA3Q6FI13 130 aa19.63■□□□□ 0.73
ATG4D-204ENST00000586417 PRMT9Q6P2P2 845 aa19.63■□□□□ 0.73
ATG4D-204ENST00000586417 SLC30A9Q6PML9 568 aa19.63■□□□□ 0.73
ATG4D-204ENST00000586417 FAM156AQ8NDB6 213 aa19.63■□□□□ 0.73
ATG4D-204ENST00000586417 ABHD11Q8NFV4 315 aa19.63■□□□□ 0.73
ATG4D-204ENST00000586417 OR2L8Q8NGY9 312 aa19.63■□□□□ 0.73
ATG4D-204ENST00000586417 JADE3Q92613 823 aa19.63■□□□□ 0.73
ATG4D-204ENST00000586417 TSSK3Q96PN8 268 aa19.63■□□□□ 0.73
ATG4D-204ENST00000586417 LRRC61Q9BV99 259 aa19.63■□□□□ 0.73
ATG4D-204ENST00000586417 RAB11FIP5Q9BXF6 653 aa19.63■□□□□ 0.73
ATG4D-204ENST00000586417 SUCOQ9UBS9 1254 aaKnown RBP19.63■□□□□ 0.73
ATG4D-204ENST00000586417 HEBP2Q9Y5Z4 205 aa19.63■□□□□ 0.73
ATG4D-204ENST00000586417 ACOT8O14734 319 aa19.62■□□□□ 0.73
ATG4D-204ENST00000586417 PCSK2P16519 638 aa19.62■□□□□ 0.73
ATG4D-204ENST00000586417 ACTR1BP42025 376 aa19.62■□□□□ 0.73
ATG4D-204ENST00000586417 ACTR1AP61163 376 aa19.62■□□□□ 0.73
ATG4D-204ENST00000586417 RAE1P78406 368 aaKnown RBP19.62■□□□□ 0.73
ATG4D-204ENST00000586417 KRT33BQ14525 404 aa19.62■□□□□ 0.73
ATG4D-204ENST00000586417 DUOXA1Q1HG43 343 aa19.62■□□□□ 0.73
ATG4D-204ENST00000586417 FAM174BQ3ZCQ3 159 aa19.62■□□□□ 0.73
ATG4D-204ENST00000586417 SPANXN4Q5MJ08 99 aa19.62■□□□□ 0.73
ATG4D-204ENST00000586417 SAMD4BQ5PRF9 694 aaKnown RBP19.62■□□□□ 0.73
ATG4D-204ENST00000586417 VN1R5Q7Z5H4 357 aa19.62■□□□□ 0.73
ATG4D-204ENST00000586417 RIMKLAQ8IXN7 391 aa19.62■□□□□ 0.73
ATG4D-204ENST00000586417 SLC15A3Q8IY34 581 aa19.62■□□□□ 0.73
ATG4D-204ENST00000586417 FAM9CQ8IZT9 166 aa19.62■□□□□ 0.73
ATG4D-204ENST00000586417 CHTF18Q8WVB6 975 aa19.62■□□□□ 0.73
ATG4D-204ENST00000586417 EGLN2Q96KS0 407 aa19.62■□□□□ 0.73
ATG4D-204ENST00000586417 TMEM74Q96NL1 305 aa19.62■□□□□ 0.73
ATG4D-204ENST00000586417 EBPLQ9BY08 206 aa19.62■□□□□ 0.73
ATG4D-204ENST00000586417 KIR3DX1Q9H7L2 352 aa19.62■□□□□ 0.73
ATG4D-204ENST00000586417 CAPN10Q9HC96 672 aa19.62■□□□□ 0.73
ATG4D-204ENST00000586417 CMTM6Q9NX76 183 aa19.62■□□□□ 0.73
ATG4D-204ENST00000586417 RUVBL1Q9Y265 456 aaKnown RBP19.62■□□□□ 0.73
ATG4D-204ENST00000586417 SDC3O75056 442 aa19.62■□□□□ 0.73
ATG4D-204ENST00000586417 EPN2O95208 641 aa19.62■□□□□ 0.73
ATG4D-204ENST00000586417 NPPAP01160 153 aa19.62■□□□□ 0.73
ATG4D-204ENST00000586417 HOXD12P35452 270 aa19.62■□□□□ 0.73
ATG4D-204ENST00000586417 PIK3CBP42338 1070 aa19.62■□□□□ 0.73
ATG4D-204ENST00000586417 ACSM2AQ08AH3 577 aa19.62■□□□□ 0.73
ATG4D-204ENST00000586417 TRIM61Q5EBN2 209 aa19.62■□□□□ 0.73
ATG4D-204ENST00000586417 ACSM2BQ68CK6 577 aa19.62■□□□□ 0.73
ATG4D-204ENST00000586417 TMIGD1Q6UXZ0 262 aa19.62■□□□□ 0.73
ATG4D-204ENST00000586417 DLEU7Q6UYE1 221 aa19.62■□□□□ 0.73
ATG4D-204ENST00000586417 KIAA2013Q8IYS2 634 aa19.62■□□□□ 0.73
ATG4D-204ENST00000586417 GPBAR1Q8TDU6 330 aa19.62■□□□□ 0.73
ATG4D-204ENST00000586417 SLC13A3Q8WWT9 602 aa19.62■□□□□ 0.73
ATG4D-204ENST00000586417 UBE2E3Q969T4 207 aa19.62■□□□□ 0.73
ATG4D-204ENST00000586417 SH3KBP1Q96B97 665 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms