RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 PSMB5P28074 263 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 TIA1P31483 386 aaKnown RBP eCLIP5.95□□□□□ -1.46
LIG3-206ENST00000586058 SSR2P43308 183 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 MRPL19P49406 292 aaKnown RBP5.95□□□□□ -1.46
LIG3-206ENST00000586058 CSNK1EP49674 416 aaKnown RBP5.95□□□□□ -1.46
LIG3-206ENST00000586058 ARL4DP49703 201 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 ATXN3P54252 364 aaPredicted RBP5.95□□□□□ -1.46
LIG3-206ENST00000586058 EPHA4P54764 986 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 NME5P56597 212 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 STXBP1P61764 594 aaKnown RBP5.95□□□□□ -1.46
LIG3-206ENST00000586058 RPS13P62277 151 aaKnown RBP5.95□□□□□ -1.46
LIG3-206ENST00000586058 HMGCS1Q01581 520 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 MEF2AQ02078 507 aaPredicted RBP5.95□□□□□ -1.46
LIG3-206ENST00000586058 FOXM1Q08050 763 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 TBL3Q12788 808 aaKnown RBP5.95□□□□□ -1.46
LIG3-206ENST00000586058 C1orf61Q13536 156 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 NFYCQ13952 458 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 RCAN2Q14206 197 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 GRB7Q14451 532 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 ZNF528Q3MIS6 628 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 CATSPEREQ5SY80 951 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 TPRG1LQ5T0D9 272 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 REP15Q6BDI9 236 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 IYDQ6PHW0 289 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 TSSK4Q6SA08 328 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 ATG14Q6ZNE5 492 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 PRR23BQ6ZRT6 265 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 TMEM26Q6ZUK4 368 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 GPR180Q86V85 440 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 PGAM4Q8N0Y7 254 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 TMEM132CQ8N3T6 1108 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 SFRP1Q8N474 314 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 FRMD1Q8N878 549 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 DTWD2Q8NBA8 298 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 GPR156Q8NFN8 814 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 OR2L3Q8NG85 312 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 CCL4L1Q8NHW4 92 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 HUS1BQ8NHY5 278 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 WDR20Q8TBZ3 569 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 SLC37A2Q8TED4 501 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 RCN3Q96D15 328 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 SPDL1Q96EA4 605 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 APOLD1Q96LR9 279 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 C3orf30Q96M34 536 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 OR4K3Q96R72 315 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 CCDC3Q9BQI4 270 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 DPH7Q9BTV6 452 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 ROGDIQ9GZN7 287 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 TUBB1Q9H4B7 451 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 EPB41L1Q9H4G0 881 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 ZNF385DQ9H6B1 395 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 ERVMER34-1Q9H9K5 563 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 WDR41Q9HAD4 459 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 SLC40A1Q9NP59 571 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 SPAG4Q9NPE6 437 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 MIEF1Q9NQG6 463 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 DMRT3Q9NQL9 472 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 SDR39U1Q9NRG7 319 aaPredicted RBP5.95□□□□□ -1.46
LIG3-206ENST00000586058 DNAAF2Q9NVR5 837 aaKnown RBP5.95□□□□□ -1.46
LIG3-206ENST00000586058 GEMIN8Q9NWZ8 242 aaKnown RBP5.95□□□□□ -1.46
LIG3-206ENST00000586058 ACTR10Q9NZ32 417 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 DLGAP2Q9P1A6 1054 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 ZNF225Q9UK10 706 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 PPT2Q9UMR5 302 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 L3MBTL1Q9Y468 752 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 CSNK1G3Q9Y6M4 447 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.95□□□□□ -1.46
LIG3-206ENST00000586058 SPACA6W5XKT8 324 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 ABCA7Q8IZY2 2146 aa5.95□□□□□ -1.46
LIG3-206ENST00000586058 KCNE1BA0A087WTH5 132 aa5.94□□□□□ -1.46
LIG3-206ENST00000586058 A6NCN8 305 aa5.94□□□□□ -1.46
LIG3-206ENST00000586058 OR6C74A6NCV1 312 aa5.94□□□□□ -1.46
LIG3-206ENST00000586058 OR5K3A6NET4 321 aa5.94□□□□□ -1.46
LIG3-206ENST00000586058 C10orf142B7Z368 130 aa5.94□□□□□ -1.46
LIG3-206ENST00000586058 NPIPB8E9PQR5 432 aa5.94□□□□□ -1.46
LIG3-206ENST00000586058 LMO7DNF2Z398 122 aa5.94□□□□□ -1.46
LIG3-206ENST00000586058 H7BY64 318 aa5.94□□□□□ -1.46
LIG3-206ENST00000586058 BTN3A3O00478 584 aa5.94□□□□□ -1.46
LIG3-206ENST00000586058 TXNDC9O14530 226 aa5.94□□□□□ -1.46
LIG3-206ENST00000586058 SDC3O75056 442 aa5.94□□□□□ -1.46
LIG3-206ENST00000586058 EEDO75530 441 aaKnown RBP5.94□□□□□ -1.46
LIG3-206ENST00000586058 CLEC3AO75596 197 aa5.94□□□□□ -1.46
LIG3-206ENST00000586058 PIAS2O75928 621 aa5.94□□□□□ -1.46
LIG3-206ENST00000586058 PDGFBP01127 241 aaPredicted RBP5.94□□□□□ -1.46
LIG3-206ENST00000586058 NPPAP01160 153 aa5.94□□□□□ -1.46
LIG3-206ENST00000586058 LMNAP02545 664 aaKnown RBP5.94□□□□□ -1.46
LIG3-206ENST00000586058 G6PDP11413 515 aa5.94□□□□□ -1.46
LIG3-206ENST00000586058 UGT2B7P16662 529 aa5.94□□□□□ -1.46
LIG3-206ENST00000586058 EPORP19235 508 aa5.94□□□□□ -1.46
LIG3-206ENST00000586058 POLR2CP19387 275 aaPredicted RBP5.94□□□□□ -1.46
LIG3-206ENST00000586058 PRPS1L1P21108 318 aa5.94□□□□□ -1.46
LIG3-206ENST00000586058 GPX3P22352 226 aa5.94□□□□□ -1.46
LIG3-206ENST00000586058 S100A3P33764 101 aa5.94□□□□□ -1.46
LIG3-206ENST00000586058 AHRP35869 848 aa5.94□□□□□ -1.46
LIG3-206ENST00000586058 TSFMP43897 325 aaKnown RBP5.94□□□□□ -1.46
LIG3-206ENST00000586058 FASLGP48023 281 aa5.94□□□□□ -1.46
LIG3-206ENST00000586058 CCT8P50990 548 aa5.94□□□□□ -1.46
LIG3-206ENST00000586058 NEK2P51955 445 aa5.94□□□□□ -1.46
LIG3-206ENST00000586058 ARFIP1P53367 373 aa5.94□□□□□ -1.46
LIG3-206ENST00000586058 CYP4F2P78329 520 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms