RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 COX15Q7KZN9 410 aa8.25□□□□□ -1.09
ATG4D-202ENST00000585437 PIGWQ7Z7B1 504 aa8.25□□□□□ -1.09
ATG4D-202ENST00000585437 CEP97Q8IW35 865 aa8.25□□□□□ -1.09
ATG4D-202ENST00000585437 C4orf33Q8N1A6 199 aa8.25□□□□□ -1.09
ATG4D-202ENST00000585437 BANPQ8N9N5 519 aa8.25□□□□□ -1.09
ATG4D-202ENST00000585437 MCOLN3Q8TDD5 553 aa8.25□□□□□ -1.09
ATG4D-202ENST00000585437 ACMSDQ8TDX5 336 aa8.25□□□□□ -1.09
ATG4D-202ENST00000585437 MZB1Q8WU39 189 aa8.25□□□□□ -1.09
ATG4D-202ENST00000585437 APOBEC4Q8WW27 367 aaKnown RBP8.25□□□□□ -1.09
ATG4D-202ENST00000585437 THAP4Q8WY91 577 aa8.25□□□□□ -1.09
ATG4D-202ENST00000585437 FKBP10Q96AY3 582 aa8.25□□□□□ -1.09
ATG4D-202ENST00000585437 C10orf90Q96M02 699 aa8.25□□□□□ -1.09
ATG4D-202ENST00000585437 OR2A5Q96R48 311 aa8.25□□□□□ -1.09
ATG4D-202ENST00000585437 GPR22Q99680 433 aa8.25□□□□□ -1.09
ATG4D-202ENST00000585437 CPNE1Q99829 537 aa8.25□□□□□ -1.09
ATG4D-202ENST00000585437 C17orf62Q9BQA9 187 aa8.25□□□□□ -1.09
ATG4D-202ENST00000585437 NDC1Q9BTX1 674 aa8.25□□□□□ -1.09
ATG4D-202ENST00000585437 VPS11Q9H270 941 aa8.25□□□□□ -1.09
ATG4D-202ENST00000585437 MRPS30Q9NP92 439 aaKnown RBP8.25□□□□□ -1.09
ATG4D-202ENST00000585437 CCDC177Q9NQR7 707 aaPredicted RBP8.25□□□□□ -1.09
ATG4D-202ENST00000585437 CUEDC1Q9NWM3 386 aaPredicted RBP8.25□□□□□ -1.09
ATG4D-202ENST00000585437 SH2B3Q9UQQ2 575 aa8.25□□□□□ -1.09
ATG4D-202ENST00000585437 LOC105369274A0A096LPK9 316 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 LOC102723532A0A0G2JNH3 316 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 A0A0J9YVX5 310 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 CDC14CA4D256 554 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 TRIM49D1C9J1S8 452 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 C9J4A7 227 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 COPEO14579 308 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 SNX3O60493 162 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 SPAG7O75391 227 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 KATNA1O75449 491 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 PIAS1O75925 651 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 AGXTP21549 392 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 CCND1P24385 295 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 HRH2P25021 359 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 GP5P40197 560 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 CSRP3P50461 194 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 DCDP81605 110 aaKnown RBP8.24□□□□□ -1.09
ATG4D-202ENST00000585437 CDKL1Q00532 357 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 POU4F1Q01851 419 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 IFT88Q13099 833 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 KCNAB2Q13303 367 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 MPP2Q14168 576 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 ZNF460Q14592 562 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 ZKSCAN8Q15776 578 aaPredicted RBP8.24□□□□□ -1.09
ATG4D-202ENST00000585437 DEFB109BQ30KR1 87 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 NKAIN1Q4KMZ8 207 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 C1orf189Q5VU69 101 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 FAM69BQ5VUD6 431 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 PRAMEF13Q5VWM6 474 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 C16orf46Q6P387 395 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 C6orf89Q6UWU4 347 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 TIFABQ6ZNK6 161 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 TTLL10Q6ZVT0 673 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 SPATA21Q7Z572 469 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 OR4N4Q8N0Y3 316 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 NKAPQ8N5F7 415 aaKnown RBP8.24□□□□□ -1.09
ATG4D-202ENST00000585437 TTC29Q8NA56 475 aaPredicted RBP8.24□□□□□ -1.09
ATG4D-202ENST00000585437 OR2Y1Q8NGV0 311 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 OR56A3Q8NH54 315 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 RAB3IL1Q8TBN0 382 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 ANKRD49Q8WVL7 239 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 FBXL8Q96CD0 374 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 SPSB2Q99619 263 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 PAIP2Q9BPZ3 127 aaKnown RBP8.24□□□□□ -1.09
ATG4D-202ENST00000585437 ARHGAP9Q9BRR9 750 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 SARGQ9BW04 601 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 SLC7A5P2Q9GIP4 190 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 PCBD2Q9H0N5 130 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 WDR54Q9H977 334 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 CUTCQ9NTM9 273 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 TXLNGQ9NUQ3 528 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 FGFR1OP2Q9NVK5 253 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 KLHL14Q9P2G3 628 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 SNX7Q9UNH6 387 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 MAN2B2Q9Y2E5 1009 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 PADI2Q9Y2J8 665 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 ARL2BPQ9Y2Y0 163 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 UBR5O95071 2799 aaPredicted RBP8.24□□□□□ -1.09
ATG4D-202ENST00000585437 SCN3AQ9NY46 2000 aa8.24□□□□□ -1.09
ATG4D-202ENST00000585437 IGLV3-12A0A075B6K2 115 aa8.23□□□□□ -1.09
ATG4D-202ENST00000585437 KCNE1BA0A087WTH5 132 aa8.23□□□□□ -1.09
ATG4D-202ENST00000585437 A0A1W2PPM1 405 aa8.23□□□□□ -1.09
ATG4D-202ENST00000585437 HYKKA2RU49 373 aa8.23□□□□□ -1.09
ATG4D-202ENST00000585437 VSTM2BA6NLU5 285 aa8.23□□□□□ -1.09
ATG4D-202ENST00000585437 EIF4E1BA6NMX2 242 aaKnown RBP8.23□□□□□ -1.09
ATG4D-202ENST00000585437 B8ZZF3 427 aa8.23□□□□□ -1.09
ATG4D-202ENST00000585437 H0YGG7 62 aa8.23□□□□□ -1.09
ATG4D-202ENST00000585437 HAT1O14929 419 aa8.23□□□□□ -1.09
ATG4D-202ENST00000585437 P2RX6O15547 441 aa8.23□□□□□ -1.09
ATG4D-202ENST00000585437 RFPL1O75677 317 aa8.23□□□□□ -1.09
ATG4D-202ENST00000585437 CEACAM4O75871 244 aa8.23□□□□□ -1.09
ATG4D-202ENST00000585437 ALBP02768 609 aa8.23□□□□□ -1.09
ATG4D-202ENST00000585437 UMODP07911 640 aa8.23□□□□□ -1.09
ATG4D-202ENST00000585437 GSTA1P08263 222 aa8.23□□□□□ -1.09
ATG4D-202ENST00000585437 CD63P08962 238 aa8.23□□□□□ -1.09
ATG4D-202ENST00000585437 TROVE2P10155 538 aaKnown RBP eCLIP8.23□□□□□ -1.09
ATG4D-202ENST00000585437 NPPBP16860 134 aa8.23□□□□□ -1.09
ATG4D-202ENST00000585437 TAC1P20366 129 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms