RNA–Protein interactions for RNA: ENST00000585058.1

RAB11FIP4-210, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 2

Gene RAB11FIP4, Length 5,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-210ENST00000585058 SLC15A1P46059 708 aa12.9□□□□□ -0.34
RAB11FIP4-210ENST00000585058 UFM1P61960 85 aa12.9□□□□□ -0.34
RAB11FIP4-210ENST00000585058 RIN1Q13671 783 aa12.9□□□□□ -0.34
RAB11FIP4-210ENST00000585058 ANKDD1AQ495B1 522 aa12.9□□□□□ -0.34
RAB11FIP4-210ENST00000585058 FAM76BQ5HYJ3 339 aa12.9□□□□□ -0.34
RAB11FIP4-210ENST00000585058 RBM20Q5T481 1227 aaKnown RBP12.9□□□□□ -0.34
RAB11FIP4-210ENST00000585058 CEACAM20Q6UY09 585 aa12.9□□□□□ -0.34
RAB11FIP4-210ENST00000585058 OR5M3Q8NGP4 307 aa12.9□□□□□ -0.34
RAB11FIP4-210ENST00000585058 ASB12Q8WXK4 309 aa12.9□□□□□ -0.34
RAB11FIP4-210ENST00000585058 IRF2BPLQ9H1B7 796 aa12.9□□□□□ -0.34
RAB11FIP4-210ENST00000585058 CPED1A4D0V7 1026 aa12.9□□□□□ -0.34
RAB11FIP4-210ENST00000585058 SOWAHBA6NEL2 793 aa12.9□□□□□ -0.34
RAB11FIP4-210ENST00000585058 TLX2O43763 284 aaPredicted RBP12.9□□□□□ -0.34
RAB11FIP4-210ENST00000585058 YES1P07947 543 aa12.9□□□□□ -0.34
RAB11FIP4-210ENST00000585058 CASRP41180 1078 aa12.9□□□□□ -0.34
RAB11FIP4-210ENST00000585058 CDK6Q00534 326 aa12.9□□□□□ -0.34
RAB11FIP4-210ENST00000585058 EFR3AQ14156 821 aa12.9□□□□□ -0.34
RAB11FIP4-210ENST00000585058 DNM1P34Q6PK57 102 aa12.9□□□□□ -0.34
RAB11FIP4-210ENST00000585058 PTF1AQ7RTS3 328 aa12.9□□□□□ -0.34
RAB11FIP4-210ENST00000585058 RASGRP3Q8IV61 690 aa12.9□□□□□ -0.34
RAB11FIP4-210ENST00000585058 ZIM2Q9NZV7 527 aa12.9□□□□□ -0.34
RAB11FIP4-210ENST00000585058 SLC2A6Q9UGQ3 507 aa12.9□□□□□ -0.34
RAB11FIP4-210ENST00000585058 SMCO3A2RU48 225 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 J3QRK9 145 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 TULP2O00295 520 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 RAB36O95755 333 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 HCKP08631 526 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 PIK3CBP42338 1070 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 SLC18A2Q05940 514 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 THOC6Q86W42 341 aaKnown RBP12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 FBXL8Q96CD0 374 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 HERC2P3Q9BVR0 1158 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 SIX2Q9NPC8 291 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 NOX1Q9Y5S8 564 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 XPNPEP2O43895 674 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 MECP2P51608 486 aaKnown RBP12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 RAB11FIP2Q7L804 512 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 ZNF227Q86WZ6 799 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 PSKH2Q96QS6 385 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 PKP2Q99959 881 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 USP29Q9HBJ7 922 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 KLRF1Q9NZS2 232 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 KNDC1Q76NI1 1749 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 AXIN1O15169 862 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 SRPRAP08240 638 aaKnown RBP12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 KCNJ5P48544 419 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 HCAR3P49019 387 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 CDKL4Q5MAI5 379 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 ZNF565Q8N9K5 539 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 WFIKKN2Q8TEU8 576 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 SEC14L1Q92503 715 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 EPYCQ99645 322 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 SDHAF3Q9NRP4 125 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 TEX13DA0A0J9YY54 714 aaPredicted RBP12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 I3L521 148 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 M0QX08 132 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 CFIP05156 583 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 C8orf89P0DMQ9 161 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 RPL10P27635 214 aaKnown RBP12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 BMP8BP34820 402 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 GSK3BP49841 420 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 RPS3AP61247 264 aaKnown RBP12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 KCTD9Q7L273 389 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 BMP8AQ7Z5Y6 402 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 NIPA2Q8N8Q9 360 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 DBF4BQ8NFT6 615 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 OR4F6Q8NGB9 312 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 C12orf43Q96C57 262 aaKnown RBP12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 ABCD2Q9UBJ2 740 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 AJAP1Q9UKB5 411 aaPredicted RBP12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 CDC14AQ9UNH5 594 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 C14orf166Q9Y224 244 aaKnown RBP12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 FMN2Q9NZ56 1722 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 H0YGN5 161 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 J3KR12 359 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 LDB2O43679 373 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 USP2O75604 605 aaPredicted RBP12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 ARL6IP5O75915 188 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 GBAP04062 536 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 ACRP10323 421 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 ATP1B2P14415 290 aaPredicted RBP12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 ZNF16P17020 682 aaPredicted RBP12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 FBXO43Q4G163 708 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 MBLAC2Q68D91 279 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 PRR23BQ6ZRT6 265 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 GOLGA7Q7Z5G4 137 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 PACRGLQ8N7B6 248 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 DENND6BQ8NEG7 585 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 CLEC4DQ8WXI8 215 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 ACDQ96AP0 544 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 HSH2DQ96JZ2 352 aa12.89□□□□□ -0.35
RAB11FIP4-210ENST00000585058 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.88□□□□□ -0.35
RAB11FIP4-210ENST00000585058 LOC730098B7Z3J9 87 aa12.88□□□□□ -0.35
RAB11FIP4-210ENST00000585058 BLOC1S5-TXNDC5H3BN57 136 aa12.88□□□□□ -0.35
RAB11FIP4-210ENST00000585058 PTNP21246 168 aa12.88□□□□□ -0.35
RAB11FIP4-210ENST00000585058 GDF5P43026 501 aa12.88□□□□□ -0.35
RAB11FIP4-210ENST00000585058 CDH11P55287 796 aa12.88□□□□□ -0.35
RAB11FIP4-210ENST00000585058 FBXL22Q6P050 247 aa12.88□□□□□ -0.35
RAB11FIP4-210ENST00000585058 CAMKVQ8NCB2 501 aa12.88□□□□□ -0.35
RAB11FIP4-210ENST00000585058 PYURFQ96I23 114 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms