RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 TXNDC9O14530 226 aa12.98□□□□□ -0.33
CSNK1D-219ENST00000581660 H2AFZP0C0S5 128 aa12.98□□□□□ -0.33
CSNK1D-219ENST00000581660 CMPK1P30085 196 aa12.98□□□□□ -0.33
CSNK1D-219ENST00000581660 RFC3P40938 356 aa12.98□□□□□ -0.33
CSNK1D-219ENST00000581660 DCAF7P61962 342 aa12.98□□□□□ -0.33
CSNK1D-219ENST00000581660 NKX6-1P78426 367 aaPredicted RBP12.98□□□□□ -0.33
CSNK1D-219ENST00000581660 RELAQ04206 551 aa12.98□□□□□ -0.33
CSNK1D-219ENST00000581660 USP10Q14694 798 aaKnown RBP12.98□□□□□ -0.33
CSNK1D-219ENST00000581660 MESDQ14696 234 aa12.98□□□□□ -0.33
CSNK1D-219ENST00000581660 GXYLT1Q4G148 440 aa12.98□□□□□ -0.33
CSNK1D-219ENST00000581660 H2AFVQ71UI9 128 aa12.98□□□□□ -0.33
CSNK1D-219ENST00000581660 ARMC10Q8N2F6 343 aa12.98□□□□□ -0.33
CSNK1D-219ENST00000581660 RAB42Q8N4Z0 105 aa12.98□□□□□ -0.33
CSNK1D-219ENST00000581660 OR10Q1Q8NGQ4 319 aa12.98□□□□□ -0.33
CSNK1D-219ENST00000581660 LPAR4Q99677 370 aa12.98□□□□□ -0.33
CSNK1D-219ENST00000581660 PNPLA3Q9NST1 481 aa12.98□□□□□ -0.33
CSNK1D-219ENST00000581660 DDX56Q9NY93 547 aaKnown RBP12.98□□□□□ -0.33
CSNK1D-219ENST00000581660 MPDZO75970 2070 aa12.97□□□□□ -0.33
CSNK1D-219ENST00000581660 IGKV1-8A0A0C4DH67 115 aa12.97□□□□□ -0.33
CSNK1D-219ENST00000581660 PEX1O43933 1283 aa12.97□□□□□ -0.33
CSNK1D-219ENST00000581660 OR1I1O60431 355 aa12.97□□□□□ -0.33
CSNK1D-219ENST00000581660 CD53P19397 219 aa12.97□□□□□ -0.33
CSNK1D-219ENST00000581660 PSMB4P28070 264 aa12.97□□□□□ -0.33
CSNK1D-219ENST00000581660 FOXN2P32314 431 aa12.97□□□□□ -0.33
CSNK1D-219ENST00000581660 AVPR1BP47901 424 aa12.97□□□□□ -0.33
CSNK1D-219ENST00000581660 ITGA8P53708 1063 aa12.97□□□□□ -0.33
CSNK1D-219ENST00000581660 MLF1P58340 268 aa12.97□□□□□ -0.33
CSNK1D-219ENST00000581660 SLC26A5P58743 744 aa12.97□□□□□ -0.33
CSNK1D-219ENST00000581660 SNRPNP63162 240 aaKnown RBP12.97□□□□□ -0.33
CSNK1D-219ENST00000581660 PPP2R2BQ00005 443 aa12.97□□□□□ -0.33
CSNK1D-219ENST00000581660 SNTB1Q13884 538 aaKnown RBP12.97□□□□□ -0.33
CSNK1D-219ENST00000581660 SFT2D3Q587I9 215 aa12.97□□□□□ -0.33
CSNK1D-219ENST00000581660 RTL6Q6ICC9 239 aa12.97□□□□□ -0.33
CSNK1D-219ENST00000581660 TTC23LQ6PF05 361 aa12.97□□□□□ -0.33
CSNK1D-219ENST00000581660 B3GNT6Q6ZMB0 384 aa12.97□□□□□ -0.33
CSNK1D-219ENST00000581660 KLHDC8BQ8IXV7 354 aa12.97□□□□□ -0.33
CSNK1D-219ENST00000581660 SHISA5Q8N114 240 aa12.97□□□□□ -0.33
CSNK1D-219ENST00000581660 CIARTQ8N365 385 aaPredicted RBP12.97□□□□□ -0.33
CSNK1D-219ENST00000581660 OR52N2Q8NGI0 321 aa12.97□□□□□ -0.33
CSNK1D-219ENST00000581660 STYXQ8WUJ0 223 aa12.97□□□□□ -0.33
CSNK1D-219ENST00000581660 CTNNBL1Q8WYA6 563 aaPredicted RBP12.97□□□□□ -0.33
CSNK1D-219ENST00000581660 RERGQ96A58 199 aaPredicted RBP12.97□□□□□ -0.33
CSNK1D-219ENST00000581660 TBL1YQ9BQ87 522 aa12.97□□□□□ -0.33
CSNK1D-219ENST00000581660 SPATA7Q9P0W8 599 aa12.97□□□□□ -0.33
CSNK1D-219ENST00000581660 MRFAP1Q9Y605 127 aa12.97□□□□□ -0.33
CSNK1D-219ENST00000581660 OR14I1A6ND48 311 aa12.96□□□□□ -0.33
CSNK1D-219ENST00000581660 OR2W5A6NFC9 320 aa12.96□□□□□ -0.33
CSNK1D-219ENST00000581660 FIGNL2A6NMB9 653 aa12.96□□□□□ -0.33
CSNK1D-219ENST00000581660 ARHGEF33A8MVX0 844 aa12.96□□□□□ -0.33
CSNK1D-219ENST00000581660 BCKDKO14874 412 aa12.96□□□□□ -0.33
CSNK1D-219ENST00000581660 P2RX6O15547 441 aa12.96□□□□□ -0.33
CSNK1D-219ENST00000581660 NSA2O95478 260 aaKnown RBP12.96□□□□□ -0.33
CSNK1D-219ENST00000581660 C1orf105O95561 183 aa12.96□□□□□ -0.33
CSNK1D-219ENST00000581660 APOA4P06727 396 aa12.96□□□□□ -0.33
CSNK1D-219ENST00000581660 PKMP14618 531 aaKnown RBP12.96□□□□□ -0.33
CSNK1D-219ENST00000581660 EZRP15311 586 aaKnown RBP12.96□□□□□ -0.33
CSNK1D-219ENST00000581660 MSNP26038 577 aaKnown RBP12.96□□□□□ -0.33
CSNK1D-219ENST00000581660 AOAHP28039 575 aa12.96□□□□□ -0.33
CSNK1D-219ENST00000581660 ADH7P40394 386 aa12.96□□□□□ -0.33
CSNK1D-219ENST00000581660 XCR1P46094 333 aa12.96□□□□□ -0.33
CSNK1D-219ENST00000581660 NR0B1P51843 470 aaKnown RBP12.96□□□□□ -0.33
CSNK1D-219ENST00000581660 PCBP2Q15366 365 aaKnown RBP eCLIP12.96□□□□□ -0.333e-8■■■■■ 30
CSNK1D-219ENST00000581660 NDUFA9Q16795 377 aa12.96□□□□□ -0.33
CSNK1D-219ENST00000581660 ASTE1Q2TB18 679 aaPredicted RBP12.96□□□□□ -0.33
CSNK1D-219ENST00000581660 CCSMST1Q4G0I0 132 aa12.96□□□□□ -0.33
CSNK1D-219ENST00000581660 ODF2Q5BJF6 829 aa12.96□□□□□ -0.33
CSNK1D-219ENST00000581660 MFSD4BQ5TF39 518 aa12.96□□□□□ -0.33
CSNK1D-219ENST00000581660 ZNF425Q6IV72 752 aa12.96□□□□□ -0.33
CSNK1D-219ENST00000581660 PAOXQ6QHF9 649 aa12.96□□□□□ -0.33
CSNK1D-219ENST00000581660 CXorf67Q86X51 503 aaPredicted RBP12.96□□□□□ -0.33
CSNK1D-219ENST00000581660 PLPP5Q8NEB5 264 aa12.96□□□□□ -0.33
CSNK1D-219ENST00000581660 OR9A4Q8NGU2 314 aa12.96□□□□□ -0.33
CSNK1D-219ENST00000581660 LKAAEAR1Q8TD35 194 aa12.96□□□□□ -0.33
CSNK1D-219ENST00000581660 CREB3L4Q8TEY5 395 aa12.96□□□□□ -0.33
CSNK1D-219ENST00000581660 SPATA13Q96N96 652 aa12.96□□□□□ -0.33
CSNK1D-219ENST00000581660 PPP1R2P1Q96PQ5 205 aa12.96□□□□□ -0.33
CSNK1D-219ENST00000581660 CARD6Q9BX69 1037 aa12.96□□□□□ -0.33
CSNK1D-219ENST00000581660 TSSK1BQ9BXA7 367 aa12.96□□□□□ -0.33
CSNK1D-219ENST00000581660 B4GALT7Q9UBV7 327 aa12.96□□□□□ -0.33
CSNK1D-219ENST00000581660 HYOU1Q9Y4L1 999 aa12.96□□□□□ -0.33
CSNK1D-219ENST00000581660 MROH6A6NGR9 719 aa12.95□□□□□ -0.34
CSNK1D-219ENST00000581660 FAM47E-STBD1D6RA91 191 aa12.95□□□□□ -0.34
CSNK1D-219ENST00000581660 NPIPA2E9PIF3 369 aa12.95□□□□□ -0.34
CSNK1D-219ENST00000581660 NPIPA3F8WFD2 350 aa12.95□□□□□ -0.34
CSNK1D-219ENST00000581660 H7C1Q1 480 aa12.95□□□□□ -0.34
CSNK1D-219ENST00000581660 ARHGEF9O43307 516 aa12.95□□□□□ -0.34
CSNK1D-219ENST00000581660 PDE9AO76083 593 aa12.95□□□□□ -0.34
CSNK1D-219ENST00000581660 GOSR1O95249 250 aa12.95□□□□□ -0.34
CSNK1D-219ENST00000581660 ERGP11308 486 aa12.95□□□□□ -0.34
CSNK1D-219ENST00000581660 RBL1P28749 1068 aa12.95□□□□□ -0.34
CSNK1D-219ENST00000581660 TPM4P67936 248 aa12.95□□□□□ -0.34
CSNK1D-219ENST00000581660 MPP1Q00013 466 aa12.95□□□□□ -0.34
CSNK1D-219ENST00000581660 RHAGQ02094 409 aa12.95□□□□□ -0.34
CSNK1D-219ENST00000581660 PRPSAP1Q14558 356 aa12.95□□□□□ -0.34
CSNK1D-219ENST00000581660 ABRAXAS2Q15018 415 aa12.95□□□□□ -0.34
CSNK1D-219ENST00000581660 FBXL19-AS1Q494R0 122 aa12.95□□□□□ -0.34
CSNK1D-219ENST00000581660 KIF2BQ8N4N8 673 aa12.95□□□□□ -0.34
CSNK1D-219ENST00000581660 OR51Q1Q8NH59 317 aa12.95□□□□□ -0.34
CSNK1D-219ENST00000581660 SH3GL2Q99962 352 aa12.95□□□□□ -0.34
CSNK1D-219ENST00000581660 ZDHHC11Q9H8X9 412 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms