RNA–Protein interactions for RNA: ENST00000581583.1

RTTN-207, Transcript of rotatin, humanhuman

TSL 2

Gene RTTN, Length 2,355 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-207ENST00000581583 UBE2E3Q969T4 207 aa11.62□□□□□ -0.55
RTTN-207ENST00000581583 RAD51AP1Q96B01 352 aa11.62□□□□□ -0.55
RTTN-207ENST00000581583 SH3KBP1Q96B97 665 aa11.62□□□□□ -0.55
RTTN-207ENST00000581583 ZDHHC5Q9C0B5 715 aa11.62□□□□□ -0.55
RTTN-207ENST00000581583 OR52A5Q9H2C5 316 aa11.62□□□□□ -0.55
RTTN-207ENST00000581583 TPT1P8Q9HAU6 139 aa11.62□□□□□ -0.55
RTTN-207ENST00000581583 CCDC177Q9NQR7 707 aaPredicted RBP11.62□□□□□ -0.55
RTTN-207ENST00000581583 DDX18Q9NVP1 670 aaKnown RBP11.62□□□□□ -0.55
RTTN-207ENST00000581583 RSL24D1Q9UHA3 163 aaKnown RBP11.62□□□□□ -0.55
RTTN-207ENST00000581583 CROCCQ5TZA2 2017 aa11.61□□□□□ -0.55
RTTN-207ENST00000581583 GRXCR1A8MXD5 290 aa11.61□□□□□ -0.55
RTTN-207ENST00000581583 RNASET2O00584 256 aaKnown RBP11.61□□□□□ -0.55
RTTN-207ENST00000581583 PCDH7O60245 1069 aa11.61□□□□□ -0.55
RTTN-207ENST00000581583 CPSF4O95639 269 aaKnown RBP11.61□□□□□ -0.55
RTTN-207ENST00000581583 EPHX1P07099 455 aa11.61□□□□□ -0.55
RTTN-207ENST00000581583 RPL10P27635 214 aaKnown RBP11.61□□□□□ -0.55
RTTN-207ENST00000581583 DCTP40126 519 aa11.61□□□□□ -0.55
RTTN-207ENST00000581583 EIF2DP41214 584 aaKnown RBP11.61□□□□□ -0.55
RTTN-207ENST00000581583 IST1P53990 364 aa11.61□□□□□ -0.55
RTTN-207ENST00000581583 ZNF763Q0D2J5 394 aa11.61□□□□□ -0.55
RTTN-207ENST00000581583 CNTN1Q12860 1018 aa11.61□□□□□ -0.55
RTTN-207ENST00000581583 RUNX3Q13761 415 aa11.61□□□□□ -0.55
RTTN-207ENST00000581583 SLBPQ14493 270 aaKnown RBP eCLIP11.61□□□□□ -0.55
RTTN-207ENST00000581583 NFE2L1Q14494 772 aa11.61□□□□□ -0.55
RTTN-207ENST00000581583 PLCL1Q15111 1095 aa11.61□□□□□ -0.55
RTTN-207ENST00000581583 RFX4Q33E94 735 aa11.61□□□□□ -0.55
RTTN-207ENST00000581583 TANGO2Q6ICL3 276 aa11.61□□□□□ -0.55
RTTN-207ENST00000581583 AMZ2Q86W34 360 aa11.61□□□□□ -0.55
RTTN-207ENST00000581583 ZZZ3Q8IYH5 903 aa11.61□□□□□ -0.55
RTTN-207ENST00000581583 CLECL1Q8IZS7 167 aa11.61□□□□□ -0.55
RTTN-207ENST00000581583 CDC26Q8NHZ8 85 aa11.61□□□□□ -0.55
RTTN-207ENST00000581583 BHLHE41Q9C0J9 482 aaPredicted RBP11.61□□□□□ -0.55
RTTN-207ENST00000581583 TOR3AQ9H497 397 aa11.61□□□□□ -0.55
RTTN-207ENST00000581583 SOX17Q9H6I2 414 aaPredicted RBP11.61□□□□□ -0.55
RTTN-207ENST00000581583 DMRT3Q9NQL9 472 aa11.61□□□□□ -0.55
RTTN-207ENST00000581583 FAM118AQ9NWS6 357 aa11.61□□□□□ -0.55
RTTN-207ENST00000581583 IFT80Q9P2H3 777 aaPredicted RBP11.61□□□□□ -0.55
RTTN-207ENST00000581583 ATP6V1HQ9UI12 483 aa11.61□□□□□ -0.55
RTTN-207ENST00000581583 C3orf18Q9UK00 162 aa11.61□□□□□ -0.55
RTTN-207ENST00000581583 C1orf226A1L170 272 aa11.61□□□□□ -0.55
RTTN-207ENST00000581583 PIPSLA2A3N6 862 aa11.61□□□□□ -0.55
RTTN-207ENST00000581583 ZNF701M0R085 212 aaPredicted RBP11.61□□□□□ -0.55
RTTN-207ENST00000581583 E2F6O75461 281 aa11.61□□□□□ -0.55
RTTN-207ENST00000581583 KELP23276 732 aa11.61□□□□□ -0.55
RTTN-207ENST00000581583 GJA4P35212 333 aa11.61□□□□□ -0.55
RTTN-207ENST00000581583 RPL3P39023 403 aaKnown RBP11.61□□□□□ -0.55
RTTN-207ENST00000581583 HLCSP50747 726 aa11.61□□□□□ -0.55
RTTN-207ENST00000581583 SF1Q15637 639 aaKnown RBP11.61□□□□□ -0.55
RTTN-207ENST00000581583 HKDC1Q2TB90 917 aa11.61□□□□□ -0.55
RTTN-207ENST00000581583 ZIK1Q3SY52 487 aaPredicted RBP11.61□□□□□ -0.55
RTTN-207ENST00000581583 ZBED5Q49AG3 693 aa11.61□□□□□ -0.55
RTTN-207ENST00000581583 ZC3H12BQ5HYM0 836 aaKnown RBP11.61□□□□□ -0.55
RTTN-207ENST00000581583 PIP5KL1Q5T9C9 394 aa11.61□□□□□ -0.55
RTTN-207ENST00000581583 NAIF1Q69YI7 327 aaPredicted RBP11.61□□□□□ -0.55
RTTN-207ENST00000581583 PNCKQ6P2M8 343 aa11.61□□□□□ -0.55
RTTN-207ENST00000581583 CRTC3Q6UUV7 619 aa11.61□□□□□ -0.55
RTTN-207ENST00000581583 SPESP1Q6UW49 350 aa11.61□□□□□ -0.55
RTTN-207ENST00000581583 VITQ6UXI7 678 aa11.61□□□□□ -0.55
RTTN-207ENST00000581583 GET4Q7L5D6 327 aaPredicted RBP11.61□□□□□ -0.55
RTTN-207ENST00000581583 R3HCC1LQ7Z5L2 792 aaKnown RBP11.61□□□□□ -0.55
RTTN-207ENST00000581583 THAP5Q7Z6K1 395 aa11.61□□□□□ -0.55
RTTN-207ENST00000581583 PDZD3Q86UT5 571 aa11.61□□□□□ -0.55
RTTN-207ENST00000581583 PTOV1Q86YD1 416 aa11.61□□□□□ -0.55
RTTN-207ENST00000581583 ZDHHC21Q8IVQ6 265 aa11.61□□□□□ -0.55
RTTN-207ENST00000581583 ZNF555Q8NEP9 628 aa11.61□□□□□ -0.55
RTTN-207ENST00000581583 SNX19Q92543 992 aa11.61□□□□□ -0.55
RTTN-207ENST00000581583 TMIGD2Q96BF3 282 aa11.61□□□□□ -0.55
RTTN-207ENST00000581583 REEP4Q9H6H4 257 aa11.61□□□□□ -0.55
RTTN-207ENST00000581583 SMURF2Q9HAU4 748 aa11.61□□□□□ -0.55
RTTN-207ENST00000581583 ATAD3AQ9NVI7 634 aa11.61□□□□□ -0.55
RTTN-207ENST00000581583 DZANK1Q9NVP4 752 aa11.61□□□□□ -0.55
RTTN-207ENST00000581583 ASF1AQ9Y294 204 aa11.61□□□□□ -0.55
RTTN-207ENST00000581583 DNMT3AQ9Y6K1 912 aaPredicted RBP11.61□□□□□ -0.55
RTTN-207ENST00000581583 MUC22E2RYF6 1773 aaPredicted RBP11.6□□□□□ -0.55
RTTN-207ENST00000581583 KLHL33A6NCF5 533 aa11.6□□□□□ -0.55
RTTN-207ENST00000581583 LBX1P52954 281 aa11.6□□□□□ -0.55
RTTN-207ENST00000581583 PHEXP78562 749 aa11.6□□□□□ -0.55
RTTN-207ENST00000581583 ARHGAP19Q14CB8 494 aa11.6□□□□□ -0.55
RTTN-207ENST00000581583 ANKRD26P1Q6NSI1 321 aa11.6□□□□□ -0.55
RTTN-207ENST00000581583 COMMD6Q7Z4G1 85 aa11.6□□□□□ -0.55
RTTN-207ENST00000581583 GPR141Q7Z602 305 aa11.6□□□□□ -0.55
RTTN-207ENST00000581583 C8orf59Q8N0T1 100 aaPredicted RBP11.6□□□□□ -0.55
RTTN-207ENST00000581583 GPR156Q8NFN8 814 aa11.6□□□□□ -0.55
RTTN-207ENST00000581583 GOT1L1Q8NHS2 421 aaPredicted RBP11.6□□□□□ -0.55
RTTN-207ENST00000581583 MPP4Q96JB8 637 aa11.6□□□□□ -0.55
RTTN-207ENST00000581583 ING2Q9H160 280 aa11.6□□□□□ -0.55
RTTN-207ENST00000581583 PRM3Q9NNZ6 103 aa11.6□□□□□ -0.55
RTTN-207ENST00000581583 ZNF282Q9UDV7 671 aaPredicted RBP11.6□□□□□ -0.55
RTTN-207ENST00000581583 KAT7O95251 611 aa11.6□□□□□ -0.55
RTTN-207ENST00000581583 ZNF682O95780 498 aa11.6□□□□□ -0.55
RTTN-207ENST00000581583 PTX3P26022 381 aaPredicted RBP11.6□□□□□ -0.55
RTTN-207ENST00000581583 SLC5A2P31639 672 aa11.6□□□□□ -0.55
RTTN-207ENST00000581583 HSD17B2P37059 387 aa11.6□□□□□ -0.55
RTTN-207ENST00000581583 ARHGDIAP52565 204 aa11.6□□□□□ -0.55
RTTN-207ENST00000581583 TSTA3Q13630 321 aaPredicted RBP11.6□□□□□ -0.55
RTTN-207ENST00000581583 SPIDRQ14159 915 aa11.6□□□□□ -0.55
RTTN-207ENST00000581583 LRRC23Q53EV4 343 aaPredicted RBP11.6□□□□□ -0.55
RTTN-207ENST00000581583 RBM48Q5RL73 367 aaKnown RBP11.6□□□□□ -0.55
RTTN-207ENST00000581583 FAM109BQ6ICB4 259 aaPredicted RBP11.6□□□□□ -0.55
RTTN-207ENST00000581583 SHQ1Q6PI26 577 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms